lineage | Count |
---|---|
lineage2.2.2 | 25 |
lineage4.2.2.1 | 2 |
lineage4.3.3 | 10 |
lineage4.2.1 | 4 |
lineage2.2.2;lineage4 | 1 |
lineage4.3.4.2 | 1 |
spoligotype | Count |
---|---|
None | 43 |
ID | Drug resistance | Lineage | Country iso2 | SRR1167184 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173290 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173783 | Pre-XDR-TB | lineage2.2.2 | None | ERR4809359 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173808 | Pre-XDR-TB | lineage2.2.2 | None | ERR11083097 | MDR-TB | lineage4.2.2.1 | None | SRR1173455 | Pre-XDR-TB | lineage2.2.2 | None | ERR13276291 | XDR-TB | lineage4.3.3 | None | ERR4809255 | MDR-TB | lineage2.2.2 | za | ERR4830602 | Pre-XDR-TB | lineage4.2.1 | tm | SRR1165223 | Pre-XDR-TB | lineage2.2.2;lineage4 | None | ERR2677416 | XDR-TB | lineage4.3.3 | de | SRR1167276 | Pre-XDR-TB | lineage2.2.2 | None | ERR5758317 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173419 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173331 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987454 | MDR-TB | lineage2.2.2 | None | SRR1173336 | Pre-XDR-TB | lineage2.2.2 | None | ERR13267525 | MDR-TB | lineage4.2.1 | None | ERR7737767 | MDR-TB | lineage2.2.2 | None | SAMN02403447 | Pre-XDR-TB | lineage2.2.2 | za | SRR1165314 | Pre-XDR-TB | lineage2.2.2 | None | SRR1165213 | Pre-XDR-TB | lineage2.2.2 | None | ERR4822324 | XDR-TB | lineage4.3.3 | de | ERR13288992 | Pre-XDR-TB | lineage2.2.2 | None | ERR4822599 | XDR-TB | lineage4.3.3 | de | SRR1167308 | Pre-XDR-TB | lineage2.2.2 | None | ERR13267512 | RR-TB | lineage4.3.3 | None | SRR21587550 | MDR-TB | lineage4.3.4.2 | None | ERR10680075 | MDR-TB | lineage4.3.3 | None | SAMN02403497 | Pre-XDR-TB | lineage2.2.2 | za | ERR11081809 | XDR-TB | lineage4.3.3 | None | ERR9119777 | MDR-TB | lineage2.2.2 | None | ERR8976117 | Pre-XDR-TB | lineage2.2.2 | None | ERR13267526 | MDR-TB | lineage4.2.1 | None | ERR11043615 | XDR-TB | lineage4.3.3 | None | ERR4822600 | XDR-TB | lineage4.3.3 | de | SRR1167268 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02403496 | Pre-XDR-TB | lineage2.2.2 | za | ERR4830650 | Pre-XDR-TB | lineage4.2.1 | tm | ERR13276320 | XDR-TB | lineage4.3.3 | None | ERR13284417 | MDR-TB | lineage4.2.2.1 | None | SAMN02403446 | Pre-XDR-TB | lineage2.2.2 | za |
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