Rv0667 - p.His445Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
11 RR-TB
0 HR-TB
117 MDR-TB
34 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 92 |
| lineage3 | 17 |
| lineage4.1.2.1 | 5 |
| lineage4.3.4.2.1 | 3 |
| lineage4.3.3 | 6 |
| lineage4 | 1 |
| lineage4.2.2.2 | 6 |
| lineage1.2.2.2 | 6 |
| lineage4.8 | 9 |
| lineage4.1.2 | 2 |
| lineage3.1.2.1 | 3 |
| lineage4.1.4 | 3 |
| lineage4.9 | 1 |
| lineage2.2.1;lineage3.1.3 | 1 |
| lineage4.4.2 | 2 |
| lineage4.1.3 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 164 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18054781 | MDR-TB | lineage2.2.1 | None | SRR1173621 | MDR-TB | lineage3 | None | ERR4827914 | Pre-XDR-TB | lineage2.2.1 | None | SRR14088348 | MDR-TB | lineage3 | None | ERR6879050 | MDR-TB | lineage4.1.2.1 | None | ERR4423752 | MDR-TB | lineage4.3.4.2.1 | None | ERR4828107 | MDR-TB | lineage2.2.1 | None | ERR4830176 | MDR-TB | lineage2.2.1 | None | ERR4830037 | MDR-TB | lineage2.2.1 | tj | ERR4828056 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828067 | MDR-TB | lineage2.2.1 | None | ERR3078014 | MDR-TB | lineage4.3.3 | None | ERR2653217 | MDR-TB | lineage4.1.2.1 | None | SRR21576598 | RR-TB | lineage2.2.1 | None | ERR4796923 | Pre-XDR-TB | lineage2.2.1 | None | SRR28706540 | MDR-TB | lineage4.3.3 | None | ERR4831742 | MDR-TB | lineage2.2.1 | vn | ERR4831718 | MDR-TB | lineage2.2.1 | vn | ERR4827428 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516561 | MDR-TB | lineage4 | nl | ERR2514398 | MDR-TB | lineage2.2.1 | gb | ERR1034802 | MDR-TB | lineage4.1.2.1 | pe | ERR9119550 | MDR-TB | lineage4.2.2.2 | None | DRR184906 | MDR-TB | lineage2.2.1 | vn | SRR1173014 | MDR-TB | lineage3 | None | SRR1173686 | MDR-TB | lineage3 | None | ERR171130 | RR-TB | lineage1.2.2.2 | za | SRR3544725 | MDR-TB | lineage2.2.1 | None | ERR4828127 | MDR-TB | lineage2.2.1 | None | SRR26937005 | MDR-TB | lineage4.8 | None | ERR4830021 | MDR-TB | lineage2.2.1 | None | ERR13288745 | MDR-TB | lineage4.1.2 | None | SRR5535835 | MDR-TB | lineage4.3.4.2.1 | None | SRR16089394 | MDR-TB | lineage2.2.1 | None | ERR7737734 | MDR-TB | lineage2.2.1 | None | SRR6831819 | MDR-TB | lineage2.2.1 | None | SRR1183085 | MDR-TB | lineage4.8 | None | ERR11081887 | MDR-TB | lineage2.2.1 | None | SRR10040199 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096238 | RR-TB | lineage1.2.2.2 | None | ERR171131 | RR-TB | lineage1.2.2.2 | za | ERR4827459 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284550 | MDR-TB | lineage2.2.1 | None | ERR13289452 | MDR-TB | lineage2.2.1 | None | SRR1175105 | MDR-TB | lineage3 | None | SRR11349162 | MDR-TB | lineage2.2.1 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR7069052 | MDR-TB | lineage4.2.2.2 | None | ERR5866003 | MDR-TB | lineage2.2.1 | None | SRR10040394 | MDR-TB | lineage2.2.1 | None | SRR15014658 | Pre-XDR-TB | lineage2.2.1 | None | ERR4423751 | MDR-TB | lineage4.3.4.2.1 | None | SRR17658008 | RR-TB | lineage3.1.2.1 | None | SRR12062515 | MDR-TB | lineage2.2.1 | None | SRR29096537 | RR-TB | lineage1.2.2.2 | None | ERR11081294 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827483 | MDR-TB | lineage2.2.1 | None | ERR13284527 | MDR-TB | lineage4.3.3 | None | ERR3639793 | Pre-XDR-TB | lineage2.2.1 | None | SRR13870409 | Pre-XDR-TB | lineage4.1.4 | None | ERR2653156 | MDR-TB | lineage4.3.3 | None | SRR26937064 | MDR-TB | lineage2.2.1 | None | SRR22424905 | RR-TB | lineage4.9 | None | SRR10040256 | MDR-TB | lineage2.2.1 | None | ERR4872081 | MDR-TB | lineage4.2.2.2 | None | ERR551162 | MDR-TB | lineage2.2.1 | None | SRR1173105 | MDR-TB | lineage3 | None | SRR26936937 | MDR-TB | lineage2.2.1 | None | SRR25827365 | MDR-TB | lineage2.2.1;lineage3.1.3 | None | SRR1180184 | MDR-TB | lineage4.8 | None | ERR13284609 | MDR-TB | lineage2.2.1 | None | ERR4828098 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864888 | MDR-TB | lineage2.2.1 | None | SRR28393656 | MDR-TB | lineage4.1.4 | None | SRR10040370 | MDR-TB | lineage4.4.2 | None | ERR4831709 | MDR-TB | lineage2.2.1 | vn | SRR15014710 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816835 | MDR-TB | lineage2.2.1 | None | ERR13284083 | Pre-XDR-TB | lineage2.2.1 | None | DRR130196 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035127 | MDR-TB | lineage2.2.1 | vn | SRR12420650 | MDR-TB | lineage2.2.1 | None | SRR22251593 | MDR-TB | lineage2.2.1 | None | ERR4828076 | MDR-TB | lineage2.2.1 | None | ERR5865477 | MDR-TB | lineage2.2.1 | None | ERR4796910 | XDR-TB | lineage3.1.2.1 | in | ERR4828058 | MDR-TB | lineage2.2.1 | None | ERR11082138 | MDR-TB | lineage4.3.3 | None | ERR3148149 | RR-TB | lineage4.1.4 | None | ERR5864890 | MDR-TB | lineage2.2.1 | None | SRR1172938 | MDR-TB | lineage3 | None | ERR9119487 | MDR-TB | lineage4.2.2.2 | None | SRR6930909 | MDR-TB | lineage1.2.2.2 | None | ERR13266083 | Pre-XDR-TB | lineage4.8 | None | ERR5865476 | MDR-TB | lineage2.2.1 | None | SRR6832461 | MDR-TB | lineage2.2.1 | None | SRR29096270 | RR-TB | lineage1.2.2.2 | None | SRR1172252 | MDR-TB | lineage4.8 | None | ERR3132231 | RR-TB | lineage3.1.2.1 | None | SRR29539313 | Pre-XDR-TB | lineage4.3.3 | None | DRR261119 | MDR-TB | lineage2.2.1 | None | SRR21276991 | Pre-XDR-TB | lineage2.2.1 | None | SRR3725703 | MDR-TB | lineage4.1.3 | None | SRR29274038 | MDR-TB | lineage4.1.2.1 | None | SAMN02599131 | MDR-TB | lineage3 | None | SAMN02599061 | MDR-TB | lineage3 | None | SAMN02599130 | MDR-TB | lineage3 | None | SAMN02599090 | MDR-TB | lineage3 | None | ERR4872146 | MDR-TB | lineage4.2.2.2 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR13291176 | MDR-TB | lineage2.2.1 | None | ERR4828052 | MDR-TB | lineage2.2.1 | None | ERR11465360 | MDR-TB | lineage4.3.4.1 | None | ERR5866004 | MDR-TB | lineage2.2.1 | None | ERR13276031 | MDR-TB | lineage4.8 | None | ERR4830070 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465361 | MDR-TB | lineage4.3.4.1 | None | SRR26937013 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827930 | MDR-TB | lineage2.2.1 | None | SAMN02628523 | MDR-TB | lineage4.8 | ir | ERR4813933 | MDR-TB | lineage4.1.2.1 | br | SRR15368749 | MDR-TB | lineage4.4.2 | None | SRR28351160 | Pre-XDR-TB | lineage4.8 | None | SRR28045040 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810790 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7911491 | Pre-XDR-TB | lineage2.2.1 | vn | SRR13232418 | MDR-TB | lineage2.2.1 | None | ERR2516532 | MDR-TB | lineage4.1.1 | pe | SRR12062514 | MDR-TB | lineage2.2.1 | None | SRR7069187 | MDR-TB | lineage2.2.1 | None | SRR21277268 | RR-TB | lineage2.2.1.1 | None | ERR4827438 | MDR-TB | lineage2.2.1 | None | SRR11662355 | MDR-TB | lineage2.2.1 | None | SRR1173727 | MDR-TB | lineage3 | None | SRR5074053 | MDR-TB | lineage2.2.1 | vn | ERR11043176 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043175 | Pre-XDR-TB | lineage2.2.1 | None | SRR3724802 | MDR-TB | lineage4.1.3 | None | ERR13286060 | MDR-TB | lineage4.1.2 | None | ERR4829132 | MDR-TB | lineage3 | pk | ERR4827929 | XDR-TB | lineage2.2.1 | None | ERR4830898 | MDR-TB | lineage2.2.1 | None | ERR13276324 | MDR-TB | lineage2.2.1 | None | SRR25206962 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828013 | Pre-XDR-TB | lineage2.2.1 | None | SRR26937138 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069372 | MDR-TB | lineage2.2.1 | None | ERR4827956 | MDR-TB | lineage2.2.1 | None | ERR3639712 | Pre-XDR-TB | lineage2.2.1 | None | SRR29341506 | MDR-TB | lineage4.2.2.2 | None | ERR13289476 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289503 | MDR-TB | lineage2.2.1 | None | ERR4828017 | Pre-XDR-TB | lineage2.2.1 | None | SRR29385255 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043181 | MDR-TB | lineage2.2.1 | None | SRR6485038 | MDR-TB | lineage2.2.1 | None | SRR1172151 | MDR-TB | lineage4.8 | None | ERR4828129 | MDR-TB | lineage2.2.1 | None | SRR1173367 | MDR-TB | lineage3 | None | ERR5864889 | MDR-TB | lineage2.2.1 | None | ERR13289441 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017709 | Pre-XDR-TB | lineage1.1.3.1 | None | SRR9971137 | MDR-TB | lineage2.2.1 | None | SRR1172861 | MDR-TB | lineage3 | None |
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