lineage | Count |
---|---|
lineage2.2.1 | 17 |
lineage4.4.1.1 | 1 |
lineage3 | 7 |
lineage2.2.2 | 6 |
lineage2.2.1.1 | 1 |
lineage4.7 | 3 |
lineage4.9 | 3 |
lineage4.1.1.3 | 3 |
lineage4.1.2.1 | 2 |
lineage4.6.2.2 | 2 |
lineage4.3.3 | 4 |
lineage4.2.2.2 | 2 |
lineage4.1.2 | 1 |
lineage1.1.2 | 1 |
lineage4.8 | 1 |
1 | |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | ERR9993139 | XDR-TB | lineage2.2.1 | None | SRR1723578 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1144757 | Pre-XDR-TB | lineage2.2.1 | None | SRR7341684 | MDR-TB | lineage4.4.1.1 | ro | SRR29289324 | XDR-TB | lineage3 | None | SRR11972371 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972447 | XDR-TB | lineage2.2.1 | None | ERR9992948 | XDR-TB | lineage2.2.2 | None | SAMN02403635 | MDR-TB | lineage2.2.2 | za | SRR29772606 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25207281 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830143 | MDR-TB | lineage2.2.1 | None | ERR11043802 | MDR-TB | lineage4.7 | None | ERR2707006 | MDR-TB | lineage4.9 | cd | ERR9992981 | XDR-TB | lineage2.2.2 | None | ERR8975646 | MDR-TB | lineage4.1.1.3 | None | SRR27069435 | MDR-TB | lineage2.2.1 | None | SRR13355776 | Pre-XDR-TB | lineage2.2.1 | None | SRR29356605 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831472 | Pre-XDR-TB | lineage3 | None | SRR29273642 | RR-TB | lineage4.1.2.1 | None | SRR29289419 | XDR-TB | lineage3 | None | SAMN02398695 | Pre-XDR-TB | lineage2.2.1 | kr | ERR9119630 | MDR-TB | lineage4.6.2.2 | None | SRR1173537 | MDR-TB | lineage2.2.2 | None | SRR1173819 | MDR-TB | lineage2.2.2 | None | ERR10680075 | MDR-TB | lineage4.3.3 | None | SRR10306025 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748129 | MDR-TB | lineage4.1.1.3 | None | ERR4800044 | MDR-TB | lineage3 | in | SRR18593222 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR2707155 | MDR-TB | lineage4.9 | cd | ERR4799892 | MDR-TB | lineage3 | in | SRR21674620 | MDR-TB | lineage4.2.2.2 | None | ERR11138654 | Pre-XDR-TB | lineage2.2.1 | None | SRR6964594 | XDR-TB | lineage3 | None | ERR4830140 | MDR-TB | lineage2.2.1 | None | SRR3743476 | MDR-TB | lineage4.3.3 | None | ERR3639716 | MDR-TB | lineage4.7 | None | ERR11043803 | MDR-TB | lineage4.7 | None | ERR1035305 | MDR-TB | lineage4.1.2.1 | br | SRR6824474 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4829486 | Pre-XDR-TB | lineage4.1.2 | it | SRR10305617 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992756 | XDR-TB | lineage2.2.2 | None | SRR29017185 | MDR-TB | lineage3 | None | ERR13262055 | Pre-XDR-TB | lineage1.1.2 | None | ERR4829713 | Pre-XDR-TB | lineage4.8 | it | ERR10762404 | MDR-TB | lineage4.3.3 | None | SRR29231301 | MDR-TB | lineage4.9 | None | ERR4553847 | MDR-TB | None | ERR13285895 | MDR-TB | lineage4.3.3 | None | SRR11972422 | MDR-TB | lineage1.1.3.1 | None | SRR671780 | MDR-TB | lineage2.2.1 | cn | ERR4872238 | MDR-TB | lineage4.6.2.2 | None | ERR9993052 | MDR-TB | lineage4.1.1.3 | None |
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