lineage | Count |
---|---|
lineage2.2.1 | 48 |
lineage4.1.1.1 | 4 |
lineage4.2.2.2 | 1 |
lineage4.3.3 | 3 |
lineage4.4.1.1 | 1 |
lineage4.7 | 2 |
lineage4.3.2 | 2 |
lineage4.1.2.1 | 7 |
1 | |
lineage3.1 | 2 |
lineage4.1.3 | 2 |
lineage4.9 | 4 |
lineage3 | 1 |
lineage1.2.2.2 | 2 |
lineage4.1.2.1;lineage4.3.4.1 | 1 |
lineage1.2.1.1 | 1 |
lineage2.2.1.2 | 1 |
lineage2.2.1.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 85 |
ID | Drug resistance | Lineage | Country iso2 | ERR4810948 | Pre-XDR-TB | lineage2.2.1 | cn | SRR833150 | MDR-TB | lineage4.1.1.1 | None | SRR28044944 | XDR-TB | lineage4.2.2.2 | None | ERR4810462 | MDR-TB | lineage2.2.1 | cn | SRR14781872 | Pre-XDR-TB | lineage4.3.3 | None | ERR4796260 | MDR-TB | lineage2.2.1 | in | SRR7341675 | MDR-TB | lineage4.4.1.1 | ro | ERR4810995 | MDR-TB | lineage2.2.1 | cn | SRR25206977 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488955 | Pre-XDR-TB | lineage4.7 | None | ERR9907727 | MDR-TB | lineage4.3.2 | None | ERR11488747 | MDR-TB | lineage4.7 | None | SRR25207071 | MDR-TB | lineage2.2.1 | None | ERR4811310 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810934 | MDR-TB | lineage2.2.1 | cn | ERR10748171 | MDR-TB | lineage4.1.1.1 | None | ERR2653173 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR20970027 | Pre-XDR-TB | lineage2.2.1 | None | SRR7592382 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4811298 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4553429 | HR-TB | None | SRR12420793 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206961 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829143 | MDR-TB | lineage3.1 | pk | ERR3273204 | MDR-TB | lineage2.2.1 | None | SRR14088361 | MDR-TB | lineage3.1 | None | ERR10680038 | MDR-TB | lineage4.1.2.1 | None | ERR2653060 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4811295 | Pre-XDR-TB | lineage2.2.1 | cn | SRR18054775 | MDR-TB | lineage2.2.1 | None | SRR6824568 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2516255 | MDR-TB | lineage4.1.3 | be | SRR25206949 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207387 | MDR-TB | lineage2.2.1 | None | SRR14782157 | Pre-XDR-TB | lineage4.3.3 | None | SRR25206952 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207079 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207104 | MDR-TB | lineage2.2.1 | None | ERR2516344 | MDR-TB | lineage4.1.3 | be | ERR4810956 | MDR-TB | lineage2.2.1 | cn | SRR25207261 | MDR-TB | lineage2.2.1 | None | SRR29016826 | MDR-TB | lineage4.9 | None | SRR8357447 | Pre-XDR-TB | lineage2.2.1 | None | ERR987747 | MDR-TB | lineage3 | None | ERR2653174 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4811287 | MDR-TB | lineage2.2.1 | cn | SRR25207223 | MDR-TB | lineage2.2.1 | None | SRR25207346 | MDR-TB | lineage2.2.1 | None | SRR25207070 | Pre-XDR-TB | lineage2.2.1 | None | ERR9907786 | MDR-TB | lineage4.3.2 | None | SRR10040479 | MDR-TB | lineage2.2.1 | None | SRR25206936 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02053762 | MDR-TB | lineage4.1.1.1 | None | SRR29017140 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR25207369 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872297 | XDR-TB | lineage4.3.3 | None | SRR29017062 | MDR-TB | lineage4.9 | None | ERR10748172 | MDR-TB | lineage4.1.1.1 | None | SRR29016969 | MDR-TB | lineage4.1.2.1;lineage4.3.4.1 | None | ERR2517031 | MDR-TB | lineage1.2.1.1 | gb | SRR10040414 | MDR-TB | lineage2.2.1 | None | ERR13267129 | XDR-TB | lineage2.2.1 | None | ERR4799804 | MDR-TB | lineage1.2.2.2 | in | ERR4810791 | Pre-XDR-TB | lineage2.2.1 | cn | SRR20969481 | MDR-TB | lineage2.2.1 | None | SRR25207216 | MDR-TB | lineage2.2.1 | None | SRR1723594 | MDR-TB | lineage2.2.1 | cn | ERR4553624 | MDR-TB | lineage4.9 | None | ERR4796777 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4797829 | Pre-XDR-TB | lineage2.2.1 | in | ERR4810933 | MDR-TB | lineage2.2.1 | cn | SRR27069435 | MDR-TB | lineage2.2.1 | None | ERR4811280 | Pre-XDR-TB | lineage2.2.1 | cn | SRR25207171 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800371 | MDR-TB | lineage2.2.1.1 | in | ERR4810867 | MDR-TB | lineage2.2.1 | cn | SRR10040152 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811288 | Pre-XDR-TB | lineage2.2.1 | cn | SRR25207365 | MDR-TB | lineage2.2.1 | None | ERR11080889 | MDR-TB | lineage4.2.1 | None | ERR2653048 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4810793 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2653141 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4553791 | MDR-TB | lineage4.9 | None | ERR4811337 | MDR-TB | lineage2.2.1 | cn |
---|