lineage | Count |
---|---|
lineage2.2.2 | 2 |
lineage4.3.3 | 2 |
lineage2.2.1.2 | 11 |
lineage4.4.1.1 | 4 |
lineage3 | 5 |
lineage3.1.1 | 2 |
lineage2 | 1 |
lineage1.2.2.2 | 3 |
lineage4.3.2 | 11 |
lineage4.3.4.2.1 | 1 |
lineage1.1.2 | 1 |
lineage2.2.1 | 3 |
lineage4.1.1.2 | 2 |
lineage4.6.1.1 | 1 |
lineage4.4.2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.4 | 1 |
spoligotype | Count |
---|---|
None | 52 |
ID | Drug resistance | Lineage | Country iso2 | ERR502885 | Pre-XDR-TB | lineage2.2.2 | None | ERR779907 | MDR-TB | lineage4.3.3 | pe | ERR2517097 | MDR-TB | lineage2.2.1.2 | gb | SRR7341654 | Pre-XDR-TB | lineage4.4.1.1 | ro | SRR20969977 | MDR-TB | lineage2.2.2 | None | ERR4799459 | MDR-TB | lineage3 | in | ERR2516917 | MDR-TB | lineage2.2.1.2 | gb | ERR4799168 | MDR-TB | lineage3 | in | ERR4797107 | Pre-XDR-TB | lineage3 | in | ERR2516935 | MDR-TB | lineage2.2.1.2 | gb | ERR4830485 | MDR-TB | lineage3.1.1 | za | ERR4799683 | Pre-XDR-TB | lineage3 | in | SRR6896296 | RR-TB | lineage2 | None | ERR4831459 | MDR-TB | lineage1.2.2.2 | None | ERR4800718 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR9907702 | MDR-TB | lineage4.3.2 | None | ERR6358781 | MDR-TB | lineage4.3.4.2.1 | None | ERR11466478 | MDR-TB | lineage4.3.2 | None | ERR7764346 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR9030484 | MDR-TB | lineage1.1.2 | None | ERR9907687 | MDR-TB | lineage4.3.2 | None | ERR5863845 | MDR-TB | lineage2.2.1 | None | ERR9907711 | MDR-TB | lineage4.3.2 | None | ERR9907753 | MDR-TB | lineage4.3.2 | None | ERR9907769 | MDR-TB | lineage4.3.2 | None | ERR9907721 | MDR-TB | lineage4.3.2 | None | ERR9907750 | MDR-TB | lineage4.3.2 | None | ERR9907749 | MDR-TB | lineage4.3.2 | None | ERR9907763 | Pre-XDR-TB | lineage4.3.2 | None | ERR9992761 | Pre-XDR-TB | lineage4.1.1.2 | None | ERR9907783 | MDR-TB | lineage4.3.2 | None | SRR10869243 | Pre-XDR-TB | lineage4.1.1.2 | None | SRR10500310 | MDR-TB | lineage1.2.2.2 | None | SRR10315490 | MDR-TB | lineage3.1.1 | None | SRR10869077 | RR-TB | lineage4.3.3 | None | SRR12634604 | Pre-XDR-TB | lineage4.6.1.1 | None | SRR15465770 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR15316364 | Pre-XDR-TB | lineage4.4.2 | None | SRR15506890 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR11050848 | RR-TB | lineage4.1.2.1 | None | SRR15506901 | MDR-TB | lineage2.2.1.2 | None | SRR15506904 | MDR-TB | lineage2.2.1.2 | None | SRR17406771 | MDR-TB | lineage2.2.1.2 | None | SRR19303821 | MDR-TB | lineage2.2.1 | None | SRR15465768 | MDR-TB | lineage2.2.1.2 | None | ERR11081205 | MDR-TB | lineage4.4 | None | SRR22424937 | Pre-XDR-TB | lineage3 | None | ERR4813848 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9588019 | MDR-TB | lineage4.4.1.1 | None | SRR9588022 | MDR-TB | lineage4.4.1.1 | None | SRR25827602 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR671795 | MDR-TB | lineage2.2.1 | cn |
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