lineage | Count |
---|---|
lineage4.8 | 8 |
lineage2.2.2 | 11 |
lineage2.2.1 | 4 |
lineage4.1.1.3 | 3 |
lineage1.2.1.2.1 | 1 |
lineage4.2.1.1 | 1 |
lineage4.3.3 | 2 |
lineage4.5 | 1 |
lineage4.1.2.1 | 5 |
lineage3 | 2 |
lineage2.1 | 2 |
lineage4.3 | 1 |
lineage4.2.2.2 | 1 |
lineage3.1.2.1 | 1 |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 44 |
ID | Drug resistance | Lineage | Country iso2 | SRR28393250 | MDR-TB | lineage4.8 | None | SRR1013632 | Pre-XDR-TB | lineage2.2.2 | None | ERR4827756 | MDR-TB | lineage2.2.1 | None | ERR13260038 | MDR-TB | lineage4.1.1.3 | None | ERR11082673 | MDR-TB | lineage4.8 | None | ERR13259985 | MDR-TB | lineage4.1.1.3 | None | ERR11068702 | MDR-TB | lineage1.2.1.2.1 | None | ERR133981 | MDR-TB | lineage4.2.1.1 | ru | SRR1013663 | Pre-XDR-TB | lineage2.2.2 | None | ERR2516492 | Pre-XDR-TB | lineage4.3.3 | pe | SRR1049028 | Pre-XDR-TB | lineage2.2.2 | None | SRR6824360 | MDR-TB | lineage4.5 | cn | ERR13285028 | MDR-TB | lineage4.8 | None | ERR551104_ERR551105 | MDR-TB | lineage4.1.2.1 | None | SRR1049059 | Pre-XDR-TB | lineage2.2.2 | None | SRR28351581 | Pre-XDR-TB | lineage3 | None | SRR28393342 | MDR-TB | lineage4.8 | None | SRR8651652 | MDR-TB | lineage2.1 | cn | ERR10680055 | MDR-TB | lineage4.8 | None | ERR13193945 | RR-TB | lineage2.2.1 | None | SRR18054801 | MDR-TB | lineage2.2.1 | None | SRR15661607 | MDR-TB | lineage4.8 | None | ERR8975977 | RR-TB | lineage4.8 | None | SRR1049029 | Pre-XDR-TB | lineage2.2.2 | None | ERR13286132 | RR-TB | lineage4.8 | None | ERR3273168 | MDR-TB | lineage4.3 | None | SRR1049058 | Pre-XDR-TB | lineage2.2.2 | None | ERR4800051 | MDR-TB | lineage2.2.2 | in | SAMN02360596 | Pre-XDR-TB | lineage2.2.2 | kr | ERR2516972 | MDR-TB | lineage4.2.2.2 | gb | ERR551104 | RR-TB | lineage4.1.2.1 | None | ERR13273248 | MDR-TB | lineage2.2.1 | None | SRR28394010 | MDR-TB | lineage4.3.3 | None | ERR040123 | MDR-TB | lineage3.1.2.1 | ug | SRR11972276 | MDR-TB | lineage1.1.3.1 | None | SRR5709824 | MDR-TB | lineage2.1 | th | SRR1013662 | Pre-XDR-TB | lineage2.2.2 | None | SAMEA2533704 | MDR-TB | lineage4.1.2.1 | uz | SRR1013631 | Pre-XDR-TB | lineage2.2.2 | None | ERR13266873 | MDR-TB | lineage3 | None | ERR551105 | RR-TB | lineage4.1.2.1 | None | ERR13260012 | MDR-TB | lineage4.1.1.3 | None | SAMN02360610 | Pre-XDR-TB | lineage2.2.2 | kr | ERR10680090 | MDR-TB | lineage4.1.2.1 | None |
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