Rv0667 - p.Val534Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
3 RR-TB
0 HR-TB
39 MDR-TB
48 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 38 |
| lineage2.2.1 | 11 |
| lineage1.1.2 | 3 |
| lineage3 | 3 |
| lineage4.8 | 2 |
| lineage4.3.4.1 | 2 |
| lineage3.1.1 | 8 |
| lineage1.1.2;lineage3.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4 | 7 |
| lineage4.1.2.1 | 2 |
| lineage4.5 | 4 |
| lineage4.3.2 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage3.1.1;lineage4.2.2.2 | 2 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2.1;lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29273667 | MDR-TB | lineage4.2.1 | None | SRR29539360 | Pre-XDR-TB | lineage2.2.1 | None | SRR29538998 | XDR-TB | lineage2.2.1 | None | SRR29772699 | MDR-TB | lineage1.1.2 | None | ERR2510473 | MDR-TB | lineage3 | pk | SRR29273990 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273993 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273950 | Pre-XDR-TB | lineage4.2.1 | None | ERR10680058 | MDR-TB | lineage4.8 | None | SRR28351259 | Pre-XDR-TB | lineage2.2.1 | None | SRR28646054 | Pre-XDR-TB | lineage4.2.1 | None | SRR28393332 | MDR-TB | lineage4.3.4.1 | None | ERR4596935 | MDR-TB | lineage3.1.1 | None | ERR1035265 | MDR-TB | lineage4.3.4.1 | br | ERR4596934 | MDR-TB | lineage1.1.2;lineage3.1.1 | None | ERR13260972 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4816369 | Pre-XDR-TB | lineage4.2.1 | gb | ERR13260593 | Pre-XDR-TB | lineage4 | None | ERR13261697 | MDR-TB | lineage4 | None | ERR13260256 | MDR-TB | lineage4 | None | ERR13260581 | Pre-XDR-TB | lineage4 | None | ERR3077956 | MDR-TB | lineage3.1.1 | None | ERR6751578 | MDR-TB | lineage4.1.2.1 | None | SRR21576704 | RR-TB | lineage4.5 | None | ERR3077964 | MDR-TB | lineage3.1.1 | None | ERR2020069 | Pre-XDR-TB | lineage2.2.1 | None | SRR10525365 | Pre-XDR-TB | lineage4.2.1 | None | SRR13583426 | MDR-TB | lineage4.3.2 | None | SRR24255958 | MDR-TB | lineage2.2.1 | None | SRR7592352 | Pre-XDR-TB | lineage4.2.1 | None | ERR13291231 | Pre-XDR-TB | lineage4.2.1 | None | SRR10525350 | Pre-XDR-TB | lineage4.2.1 | None | SRR13423543 | Pre-XDR-TB | lineage4.8 | None | SRR10525341 | Pre-XDR-TB | lineage4.2.1 | None | SRR16089533 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273753 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273947 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273894 | Pre-XDR-TB | lineage4.2.1 | None | ERR13260621 | Pre-XDR-TB | lineage4 | None | SRR29273625 | MDR-TB | lineage4.2.1 | None | ERR117699 | MDR-TB | lineage1.1.2 | None | ERR4798732 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR671811 | MDR-TB | lineage2.2.1 | cn | SRR29274169 | Pre-XDR-TB | lineage4.2.1 | None | SRR28646090 | XDR-TB | lineage4.2.1 | None | SRR24799283 | Pre-XDR-TB | lineage3 | None | ERR1555046 | MDR-TB | lineage4.1.2 | None | SRR6824354 | MDR-TB | lineage4.5 | cn | ERR3078017 | MDR-TB | lineage3.1.1 | None | SRR7592372 | Pre-XDR-TB | lineage4.2.1 | None | ERR13261654 | MDR-TB | lineage4 | None | ERR3077965 | MDR-TB | lineage3.1.1 | None | ERR3077963 | MDR-TB | lineage3.1.1;lineage4.2.2.2 | None | SRR10525354 | Pre-XDR-TB | lineage4.2.1 | None | SRR22528578 | MDR-TB | lineage4.1.1 | None | ERR3077998 | MDR-TB | lineage3.1.1;lineage4.2.2.2 | None | SRR29093693 | RR-TB | lineage4.3.4.2.1 | None | SRR29273653 | Pre-XDR-TB | lineage4.2.1 | None | ERR13276161 | Pre-XDR-TB | lineage4.2.1 | None | SRR29052887 | Pre-XDR-TB | lineage4.2.1 | None | SRR29274171 | Pre-XDR-TB | lineage4.2.1 | None | ERR11068332 | MDR-TB | lineage3 | None | SRR29273986 | Pre-XDR-TB | lineage4.2.1 | None | ERR10877873 | MDR-TB | lineage2.2.1 | None | SRR29273945 | Pre-XDR-TB | lineage4.2.1 | None | SRR29274158 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273755 | Pre-XDR-TB | lineage4.2.1 | None | SRR21677637 | Pre-XDR-TB | lineage4.2.1 | None | ERR2516995 | Pre-XDR-TB | lineage4.2.1 | gb | ERR4815445 | Pre-XDR-TB | lineage4.2.1 | gb | SRR14270079 | MDR-TB | lineage2.2.1 | None | ERR1034834 | MDR-TB | lineage4.1.2.1 | pt | SRR24827269 | Pre-XDR-TB | lineage4.2.1 | None | SRR26331601 | RR-TB | lineage4.3.2.1 | None | SRR10525342 | Pre-XDR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR7592385 | Pre-XDR-TB | lineage4.2.1 | None | ERR13260607 | Pre-XDR-TB | lineage4 | None | ERR11043925 | Pre-XDR-TB | lineage4.2.1 | None | SRR29274170 | Pre-XDR-TB | lineage4.2.1 | None | ERR13291384 | Pre-XDR-TB | lineage4.2.1 | None | ERR4830883 | MDR-TB | lineage3.1.1 | None | SRR1723916 | MDR-TB | lineage4.5 | cn | SRR29772518 | MDR-TB | lineage1.1.2 | None | ERR2179643 | MDR-TB | lineage4.5 | cn | SRR7657754 | Pre-XDR-TB | lineage2.2.1 | None | ERR3078016 | MDR-TB | lineage3.1.1 | None | SRR29539113 | MDR-TB | lineage2.2.1 | None | SRR29539525 | MDR-TB | lineage2.2.1 | None | ERR3077930 | MDR-TB | lineage3.1.1 | None | SRR29050734 | MDR-TB | lineage4.3.2 | None | SRR29273841 | Pre-XDR-TB | lineage4.2.1 | None | SRR7592337 | Pre-XDR-TB | lineage4.2.1 | None |
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