lineage | Count |
---|---|
lineage4.5 | 4 |
lineage2.2.1 | 11 |
lineage4.3.2.1 | 1 |
lineage4.3.4.1 | 2 |
lineage4.2.1 | 38 |
lineage4.1.2.1;lineage4.2.1 | 1 |
lineage4 | 7 |
lineage3.1.1 | 8 |
lineage1.1.2 | 3 |
lineage3 | 3 |
lineage4.8 | 2 |
lineage4.1.2.1 | 2 |
lineage2.2.1.1 | 1 |
lineage4.3.2 | 2 |
lineage4.1.2 | 1 |
lineage4.2.2.2 | 1 |
lineage1.1.2;lineage3.1.1 | 1 |
lineage3.1.1;lineage4.2.2.2 | 2 |
lineage4.1.1 | 1 |
lineage4.3.4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 92 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR6824354 | MDR-TB | lineage4.5 | cn |
SRR14270079 | MDR-TB | lineage2.2.1 | None |
SRR26331601 | RR-TB | lineage4.3.2.1 | None |
ERR1035265 | MDR-TB | lineage4.3.4.1 | br |
SRR7592372 | Pre-XDR-TB | lineage4.2.1 | None |
SRR10525342 | Pre-XDR-TB | lineage4.1.2.1;lineage4.2.1 | None |
ERR2179643 | MDR-TB | lineage4.5 | cn |
ERR13261697 | MDR-TB | lineage4 | None |
ERR13260256 | MDR-TB | lineage4 | None |
ERR13260581 | Pre-XDR-TB | lineage4 | None |
ERR13261654 | MDR-TB | lineage4 | None |
ERR3077965 | MDR-TB | lineage3.1.1 | None |
ERR3077956 | MDR-TB | lineage3.1.1 | None |
ERR11043925 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29274170 | Pre-XDR-TB | lineage4.2.1 | None |
ERR13291384 | Pre-XDR-TB | lineage4.2.1 | None |
SRR10525354 | Pre-XDR-TB | lineage4.2.1 | None |
ERR4830883 | MDR-TB | lineage3.1.1 | None |
SRR21576704 | RR-TB | lineage4.5 | None |
SRR29772518 | MDR-TB | lineage1.1.2 | None |
SRR24255958 | MDR-TB | lineage2.2.1 | None |
ERR11068332 | MDR-TB | lineage3 | None |
SRR29539113 | MDR-TB | lineage2.2.1 | None |
ERR13291231 | Pre-XDR-TB | lineage4.2.1 | None |
ERR3077930 | MDR-TB | lineage3.1.1 | None |
SRR29273986 | Pre-XDR-TB | lineage4.2.1 | None |
SRR10525350 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29539360 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13423543 | Pre-XDR-TB | lineage4.8 | None |
SRR10525341 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29772699 | MDR-TB | lineage1.1.2 | None |
SRR29273947 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29273894 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29273950 | Pre-XDR-TB | lineage4.2.1 | None |
SRR28646090 | XDR-TB | lineage4.2.1 | None |
ERR1034834 | MDR-TB | lineage4.1.2.1 | pt |
SRR7592385 | Pre-XDR-TB | lineage4.2.1 | None |
ERR13260972 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR4816369 | Pre-XDR-TB | lineage4.2.1 | gb |
ERR6751578 | MDR-TB | lineage4.1.2.1 | None |
ERR3077964 | MDR-TB | lineage3.1.1 | None |
ERR2020069 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10525365 | Pre-XDR-TB | lineage4.2.1 | None |
ERR13276161 | Pre-XDR-TB | lineage4.2.1 | None |
SRR13583426 | MDR-TB | lineage4.3.2 | None |
SRR7657754 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3078016 | MDR-TB | lineage3.1.1 | None |
SRR29052887 | Pre-XDR-TB | lineage4.2.1 | None |
SRR7592352 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29539525 | MDR-TB | lineage2.2.1 | None |
SRR29050734 | MDR-TB | lineage4.3.2 | None |
SRR29273841 | Pre-XDR-TB | lineage4.2.1 | None |
ERR10877873 | MDR-TB | lineage2.2.1 | None |
SRR29273945 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29274158 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29273667 | MDR-TB | lineage4.2.1 | None |
SRR29273753 | Pre-XDR-TB | lineage4.2.1 | None |
SRR21677637 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29273625 | MDR-TB | lineage4.2.1 | None |
SRR29273990 | Pre-XDR-TB | lineage4.2.1 | None |
ERR2510473 | MDR-TB | lineage3 | pk |
SRR29273993 | Pre-XDR-TB | lineage4.2.1 | None |
ERR10680058 | MDR-TB | lineage4.8 | None |
SRR28646054 | Pre-XDR-TB | lineage4.2.1 | None |
ERR1555046 | MDR-TB | lineage4.1.2 | None |
SRR28393332 | MDR-TB | lineage4.3.4.1 | None |
ERR4798732 | Pre-XDR-TB | lineage4.2.2.2 | in |
ERR2516995 | Pre-XDR-TB | lineage4.2.1 | gb |
ERR4815445 | Pre-XDR-TB | lineage4.2.1 | gb |
ERR3078017 | MDR-TB | lineage3.1.1 | None |
ERR4596935 | MDR-TB | lineage3.1.1 | None |
SRR24827269 | Pre-XDR-TB | lineage4.2.1 | None |
ERR4596934 | MDR-TB | lineage1.1.2;lineage3.1.1 | None |
SRR1723916 | MDR-TB | lineage4.5 | cn |
ERR13260593 | Pre-XDR-TB | lineage4 | None |
ERR13260607 | Pre-XDR-TB | lineage4 | None |
SRR16089533 | Pre-XDR-TB | lineage4.2.1 | None |
ERR3077963 | MDR-TB | lineage3.1.1;lineage4.2.2.2 | None |
SRR22528578 | MDR-TB | lineage4.1.1 | None |
ERR3077998 | MDR-TB | lineage3.1.1;lineage4.2.2.2 | None |
SRR29093693 | RR-TB | lineage4.3.4.2.1 | None |
SRR29273653 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29274171 | Pre-XDR-TB | lineage4.2.1 | None |
SRR7592337 | Pre-XDR-TB | lineage4.2.1 | None |
SRR29538998 | XDR-TB | lineage2.2.1 | None |
SRR29273755 | Pre-XDR-TB | lineage4.2.1 | None |
ERR13260621 | Pre-XDR-TB | lineage4 | None |
ERR117699 | MDR-TB | lineage1.1.2 | None |
SRR29274169 | Pre-XDR-TB | lineage4.2.1 | None |
SRR24799283 | Pre-XDR-TB | lineage3 | None |
SRR671811 | MDR-TB | lineage2.2.1 | cn |
SRR28351259 | Pre-XDR-TB | lineage2.2.1 | None |