Rv0667 - p.Val534Met
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
8 RR-TB
2 HR-TB
124 MDR-TB
34 Pre-XDR-TB
1 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 59 |
| lineage4.6.1.2 | 1 |
| lineage4.1.2.1 | 73 |
| lineage4.3.3 | 5 |
| lineage3 | 9 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.1 | 3 |
| lineage4.1.2.1;lineage4.3.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.8 | 5 |
| lineage2.2.2 | 1 |
| lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.3.2 | 2 |
| lineage1.1.2 | 3 |
| lineage1.2.1.2 | 1 |
| lineage4.6.1.2;lineage4.6.5 | 1 |
| lineage4.3.4.2.1;lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 171 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6831887 | MDR-TB | lineage2.2.1 | None | ERR6358717 | MDR-TB | lineage4.6.1.2 | None | ERR3013480 | MDR-TB | lineage4.1.2.1 | tn | SRR18715108 | MDR-TB | lineage2.2.1 | None | SRR29539563 | Pre-XDR-TB | lineage2.2.1 | None | ERR11552012 | MDR-TB | lineage4.1.2.1 | None | SRR29017235 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285152 | MDR-TB | lineage4.3.3 | None | ERR11068911 | MDR-TB | lineage2.2.1 | None | SRR3105757 | Pre-XDR-TB | lineage3 | None | ERR2510343 | Pre-XDR-TB | lineage3 | pk | ERR4020189 | MDR-TB | lineage4.4.1.1 | None | ERR1035328 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR3014609 | MDR-TB | lineage4.1.2.1 | tn | ERR3013479 | MDR-TB | lineage4.1.2.1 | tn | ERR3014582 | MDR-TB | lineage4.1.2.1 | tn | ERR3014622 | MDR-TB | lineage4.1.2.1 | tn | SRR29539197 | MDR-TB | lineage2.2.1 | None | ERR4822406 | MDR-TB | lineage2.2.1 | ua | ERR4798486 | MDR-TB | lineage3 | in | ERR3273173 | MDR-TB | lineage4.4.1.1 | None | ERR11068634 | XDR-TB | lineage2.2.1 | None | SRR28351255 | RR-TB | lineage3 | None | ERR12790858 | Pre-XDR-TB | lineage2.2.1 | None | ERR3014595 | MDR-TB | lineage4.1.2.1 | tn | ERR3014612 | MDR-TB | lineage4.1.2.1 | tn | ERR5863907 | MDR-TB | lineage2.2.1 | None | ERR2851370 | Pre-XDR-TB | lineage2.2.1 | lb | SRR6797530 | MDR-TB | lineage2.2.1 | None | SRR29539502 | Pre-XDR-TB | lineage2.2.1 | None | ERR3014586 | MDR-TB | lineage4.1.2.1 | tn | SRR29017688 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539507 | Pre-XDR-TB | lineage2.2.1 | None | ERR3014587 | MDR-TB | lineage4.1.2.1 | tn | ERR11552004 | MDR-TB | lineage4.1.2.1 | None | ERR11551983 | MDR-TB | lineage4.1.2.1;lineage4.3.1 | None | ERR11552249 | MDR-TB | lineage4.1.2.1 | None | ERR11551986 | MDR-TB | lineage4.1.2.1 | None | ERR11552002 | MDR-TB | lineage4.1.2.1 | None | ERR2510865 | MDR-TB | lineage4.1.2.1 | it | ERR6358936 | MDR-TB | lineage4.3.4.2.1 | None | ERR11083084 | MDR-TB | lineage4.3.3 | None | ERR4553920 | Pre-XDR-TB | lineage2.2.1 | None | ERR3014616 | MDR-TB | lineage4.1.2.1 | tn | ERR3014588 | MDR-TB | lineage4.1.2.1 | tn | ERR11552011 | MDR-TB | lineage4.1.2.1 | None | ERR11551998 | MDR-TB | lineage4.1.2.1 | None | SRR25207150 | Pre-XDR-TB | lineage4.5 | None | ERR11552009 | MDR-TB | lineage4.1.2.1 | None | SRR14782239 | MDR-TB | lineage2.2.1 | None | ERR9806651 | Other | lineage4.8 | None | SRR29539744 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256162 | MDR-TB | lineage2.2.1 | None | ERR11551988 | MDR-TB | lineage4.1.2.1 | None | ERR13284568 | MDR-TB | lineage2.2.1 | None | ERR11551994 | MDR-TB | lineage4.1.2.1 | None | ERR11552015 | MDR-TB | lineage4.1.2.1 | None | SRR29539497 | MDR-TB | lineage2.2.1 | None | ERR3014607 | Pre-XDR-TB | lineage4.1.2.1 | tn | SRR25207038 | MDR-TB | lineage2.2.2 | None | ERR3014599 | Pre-XDR-TB | lineage4.1.2.1 | tn | SRR24256364 | MDR-TB | lineage2.2.1 | None | ERR11551984 | MDR-TB | lineage4.1.2.1 | None | SRR25515200 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035309 | Pre-XDR-TB | lineage4.3.4.1 | br | SRR29289151 | Pre-XDR-TB | lineage3 | None | SRR29289152 | Pre-XDR-TB | lineage3 | None | ERR4800376 | Pre-XDR-TB | lineage2.2.1 | in | SRR29273823 | MDR-TB | lineage4.1.2.1 | None | SRR4423151 | Pre-XDR-TB | lineage2.2.1 | None | ERR11552000 | MDR-TB | lineage4.1.2.1 | None | ERR11551991 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4829085 | RR-TB | lineage4.8 | it | ERR4822551 | MDR-TB | lineage2.2.1 | ua | ERR13264910 | MDR-TB | lineage4.9 | None | ERR4812246 | MDR-TB | lineage4 | pe | ERR4831485 | Pre-XDR-TB | lineage3 | None | ERR11551999 | MDR-TB | lineage4.1.2.1 | None | ERR11551982 | MDR-TB | lineage4.1.2.1 | None | ERR4813457 | RR-TB | lineage4.3.2 | pe | ERR4831484 | Pre-XDR-TB | lineage3 | None | ERR4813873 | MDR-TB | lineage4.3.4.1 | None | SRR12420516 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255953 | Pre-XDR-TB | lineage2.2.1 | None | ERR11551987 | MDR-TB | lineage4.1.2.1 | None | ERR1193860 | MDR-TB | lineage4.3.3 | de | ERR2516940 | MDR-TB | lineage3 | gb | ERR2307497 | MDR-TB | lineage2.2.1 | None | SRR3085366 | MDR-TB | lineage4.1.2.1 | None | SRR13180235 | MDR-TB | lineage4.1.2.1 | None | SRR3082135 | MDR-TB | lineage4.1.2.1 | None | ERR11552001 | MDR-TB | lineage4.1.2.1 | None | ERR11552005 | MDR-TB | lineage4.1.2.1 | None | ERR11551990 | MDR-TB | lineage4.1.2.1 | None | ERR11552003 | MDR-TB | lineage4.1.2.1 | None | ERR11551996 | MDR-TB | lineage4.1.2.1 | None | SRR24256097 | MDR-TB | lineage2.2.1 | None | SRR6832465 | MDR-TB | lineage2.2.1 | None | SRR11972451 | Pre-XDR-TB | lineage2.2.1 | None | ERR11551979 | MDR-TB | lineage4.1.2.1 | None | SRR23862029 | MDR-TB | lineage2.2.1 | None | ERR11552014 | MDR-TB | lineage4.1.2.1 | None | ERR3014615 | MDR-TB | lineage4.1.2.1 | tn | SRR16097554 | HR-TB | lineage1.1.2 | None | ERR3014594 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR11551981 | MDR-TB | lineage4.1.2.1 | None | ERR11551989 | MDR-TB | lineage4.1.2.1 | None | ERR11044816 | MDR-TB | lineage2.2.1 | None | ERR3014583 | MDR-TB | lineage4.1.2.1 | tn | ERR4553903 | MDR-TB | lineage2.2.1 | None | SRR29906753 | MDR-TB | lineage2.2.1 | None | ERR8773836 | RR-TB | lineage4.8 | None | SRR30180283 | MDR-TB | lineage1.2.1.2 | None | SRR29681486 | MDR-TB | lineage2.2.1 | None | ERR3014608 | MDR-TB | lineage4.1.2.1 | tn | ERR3014623 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR11551997 | MDR-TB | lineage4.1.2.1 | None | ERR13285184 | MDR-TB | lineage4.3.3 | None | SRR24256043 | MDR-TB | lineage2.2.1 | None | ERR3014604 | MDR-TB | lineage4.1.2.1 | tn | SRR29539214 | Pre-XDR-TB | lineage2.2.1 | None | SRR29016817 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256025 | MDR-TB | lineage2.2.1 | None | ERR11552013 | MDR-TB | lineage4.1.2.1 | None | ERR11069042 | MDR-TB | lineage4.3.3 | None | SRR24256147 | MDR-TB | lineage2.2.1 | None | ERR11552006 | MDR-TB | lineage4.1.2.1 | None | ERR11551993 | MDR-TB | lineage4.1.2.1 | None | ERR3014611 | MDR-TB | lineage4.1.2.1 | tn | ERR11551980 | MDR-TB | lineage4.1.2.1 | None | SRR6832421 | MDR-TB | lineage2.2.1 | None | ERR6358721 | MDR-TB | lineage4.6.1.2;lineage4.6.5 | None | ERR502952 | MDR-TB | lineage2.2.1 | None | SRR6831939 | RR-TB | lineage2.2.1 | None | ERR3014619 | MDR-TB | lineage4.1.2.1 | tn | ERR5863906 | MDR-TB | lineage2.2.1 | None | SRR6824649 | MDR-TB | lineage2.2.1 | cn | SRR6824477 | MDR-TB | lineage2.2.1 | cn | ERR11552010 | MDR-TB | lineage4.1.2.1 | None | ERR11049512 | MDR-TB | lineage4.1.2.1 | None | ERR3014624 | MDR-TB | lineage4.1.2.1 | tn | SRR29539624 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553951 | Pre-XDR-TB | lineage2.2.1 | None | SRR25395593 | MDR-TB | lineage2.2.1 | None | ERR3014617 | MDR-TB | lineage4.1.2.1 | tn | SRR6832424 | MDR-TB | lineage2.2.1 | None | ERR10610215 | Other | lineage4.8 | None | ERR3014614 | MDR-TB | lineage4.1.2.1 | tn | ERR11552008 | MDR-TB | lineage4.1.2.1 | None | ERR3014581 | MDR-TB | lineage4.1.2.1 | tn | ERR11551992 | MDR-TB | lineage4.1.2.1 | None | ERR11551985 | MDR-TB | lineage4.1.2.1 | None | ERR8773838 | RR-TB | lineage4.8 | None | ERR13291609 | HR-TB | lineage1.1.2 | None | ERR4020182 | MDR-TB | lineage4.3.4.2.1;lineage4.4.1.1 | None | SRR15014754 | MDR-TB | lineage1.1.2 | None | ERR11552007 | MDR-TB | lineage4.1.2.1 | None | SRR1723555 | MDR-TB | lineage2.2.1 | cn | ERR6866737 | RR-TB | lineage4.3.2 | None | SRR29539190 | MDR-TB | lineage2.2.1 | None | ERR3014613 | Pre-XDR-TB | lineage4.1.2.1 | tn | ERR3014625 | MDR-TB | lineage4.1.2.1 | tn | SRR25389436 | RR-TB | lineage2.2.1 | None | ERR3014584 | MDR-TB | lineage4.1.2.1 | tn | ERR3014606 | MDR-TB | lineage4.1.2.1 | tn | SRR29539708 | MDR-TB | lineage2.2.1 | None | ERR13290976 | MDR-TB | lineage2.2.1 | None | ERR3014620 | MDR-TB | lineage4.1.2.1 | tn | ERR11068876 | MDR-TB | lineage2.2.1 | None | ERR3014621 | MDR-TB | lineage4.1.2.1 | tn | SRR6832743 | MDR-TB | lineage2.2.1 | None |
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