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SRA data
Rv0668
- c.1944C>T
Drug resistance types
1 Sensitive
0 RR-TB
3 HR-TB
3 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.2
7
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
1
lineage2.2.2;lineage4
1
La1.6;La3;lineage4.6.4;lineage4.9
1
M.canetti;lineage4.9;lineage9
1
La1.2.BCG
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
13
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR13191062
MDR-TB
lineage2.2.2
None
ERR13191375
MDR-TB
lineage2.2.2
None
ERR13230064
Sensitive
lineage2.2.2
None
ERR13243907
MDR-TB
lineage2.2.2
None
ERR13266782
Pre-XDR-TB
lineage2.2.2
None
ERR2693230
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR2693231
Other
La1.6;La3;lineage4.6.4;lineage4.9
None
ERR2693257
Other
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9
None
ERR4798262
HR-TB
La1.2.BCG
None
Showing 1 to 10 of 13 entries
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