Rv0668 - p.Asn698Lys
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
4 RR-TB
0 HR-TB
119 MDR-TB
58 Pre-XDR-TB
4 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 92 |
| lineage4.3.3 | 20 |
| lineage3 | 10 |
| lineage4.1.1.3 | 11 |
| lineage4.2.1 | 2 |
| lineage1.1.3 | 2 |
| lineage4.2.1.1 | 4 |
| lineage3.1.1 | 2 |
| lineage2.2.1.1 | 5 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.6.1.2 | 12 |
| lineage4.1.1.1 | 2 |
| lineage1.2.2.2 | 5 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage2.1 | 2 |
| lineage3.1.2 | 4 |
| lineage1.1.2 | 1 |
| lineage1.2.2.2;lineage4 | 1 |
| 2 | |
| lineage3.1.2;lineage4.2.2.2;lineage4.3.3 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.3.2 | 1 |
| lineage3.1.2;lineage4.3.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 185 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5865401 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069450 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809190 | MDR-TB | lineage4.3.3 | za | SRR25206899 | MDR-TB | lineage2.2.1 | None | SRR28393914 | MDR-TB | lineage4.3.3 | None | SRR28046246 | Pre-XDR-TB | lineage3 | None | SRR10040200 | MDR-TB | lineage2.2.1 | None | ERR6865419 | MDR-TB | lineage4.3.3 | None | SRR12708385 | MDR-TB | lineage4.1.1.3 | None | ERR144624 | MDR-TB | lineage4.2.1 | ru | ERR2516552 | MDR-TB | lineage4.3.3 | pe | ERR9119819 | MDR-TB | lineage4.1.1.3 | None | SRR20970002 | Pre-XDR-TB | lineage2.2.1 | None | SRR28394055 | MDR-TB | lineage4.3.3 | None | SRR28351280 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02419592 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419577 | Pre-XDR-TB | lineage2.2.1 | by | SRR1181074 | Pre-XDR-TB | lineage2.2.1 | None | ERR4024854 | MDR-TB | lineage4.3.3 | None | ERR4553473 | MDR-TB | lineage1.1.3 | None | ERR5866283 | MDR-TB | lineage4.2.1.1 | None | ERR13267010 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762378 | Pre-XDR-TB | lineage2.2.1 | None | DRR130175 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680109 | RR-TB | lineage4.3.3 | None | ERR11488719 | MDR-TB | lineage3.1.1 | None | ERR553391 | MDR-TB | lineage2.2.1 | None | SRR28046064 | MDR-TB | lineage2.2.1.1 | None | SRR25827332 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR29230791 | MDR-TB | lineage4.6.1.2 | None | SRR29052825 | MDR-TB | lineage2.2.1 | None | SRR22249738 | MDR-TB | lineage2.2.1 | None | SRR29539545 | MDR-TB | lineage2.2.1 | None | SRR29016886 | MDR-TB | lineage4.1.1.1 | None | SRR28393533 | MDR-TB | lineage4.3.3 | None | SRR833163 | MDR-TB | lineage4.3.3 | None | SRR29772448 | Pre-XDR-TB | lineage3 | None | SRR23310895 | MDR-TB | lineage2.2.1 | None | ERR11489004 | MDR-TB | lineage2.2.1 | None | ERR2503423 | MDR-TB | lineage3.1.1 | fi | SRR29017175 | MDR-TB | lineage1.2.2.2 | None | ERR11082336 | MDR-TB | lineage4.6.1.2 | None | SRR29094055 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13266658 | Pre-XDR-TB | lineage3 | None | SRR20969550 | MDR-TB | lineage2.2.1 | None | SRR11662154 | MDR-TB | lineage2.2.1 | None | SRR16058683 | MDR-TB | lineage2.2.1 | None | ERR13285820 | MDR-TB | lineage2.2.1 | None | ERR1654680 | MDR-TB | lineage4.6.1.2 | None | ERR5865400 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866057 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911370 | MDR-TB | lineage4.3.3 | None | SRR18714930 | MDR-TB | lineage4.2.1.1 | None | SRR25827364 | XDR-TB | lineage2.2.1;lineage3.1.2 | None | ERR13291036 | MDR-TB | lineage2.1 | None | SRR25827816 | XDR-TB | lineage3.1.2 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR29231814 | MDR-TB | lineage4.6.1.2 | None | ERR5865750 | MDR-TB | lineage2.2.1 | None | SRR29017676 | MDR-TB | lineage1.2.2.2;lineage4 | None | ERR11080966 | MDR-TB | lineage4.6.1.2 | None | SRR18593228 | MDR-TB | lineage3 | None | SRR28435006 | Pre-XDR-TB | lineage2.2.1 | None | ERR11489046 | MDR-TB | lineage2.2.1 | None | ERR4798173 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798447 | MDR-TB | lineage4.3.3 | in | ERR4799739 | MDR-TB | lineage2.2.1.1 | in | ERR751550 | MDR-TB | lineage4.3.3 | pe | SRR28393993 | MDR-TB | lineage4.3.3 | None | ERR2707095 | MDR-TB | lineage4.6.1.2 | cd | ERR2707076 | MDR-TB | lineage4.6.1.2 | cd | ERR2707077 | MDR-TB | lineage4.6.1.2 | cd | SRR3732645 | MDR-TB | lineage4.3.3 | None | SRR11972299 | MDR-TB | lineage2.2.1 | None | SRR849475 | MDR-TB | lineage2.2.1 | None | ERR1199110 | MDR-TB | lineage4.6.1.2 | cd | ERR234584 | MDR-TB | lineage2.2.1 | ru | ERR9806679 | MDR-TB | lineage4.1.1.3 | None | SRR25827736 | XDR-TB | lineage3 | None | SRR29016870 | MDR-TB | lineage1.2.2.2 | None | ERR4553689 | MDR-TB | None | ERR5865397 | Pre-XDR-TB | lineage2.2.1 | None | SRR7517813 | MDR-TB | lineage4.3.3 | pe | SRR11871411 | MDR-TB | lineage2.2.1 | None | SRR606318 | MDR-TB | lineage2.2.1 | None | SRR25827517 | Pre-XDR-TB | lineage3.1.2;lineage4.2.2.2;lineage4.3.3 | None | ERR5865398 | Pre-XDR-TB | lineage2.2.1 | None | SRR8847007 | MDR-TB | lineage2.2.1 | None | ERR9124971 | MDR-TB | lineage2.2.1 | None | ERR4827948 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796978 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR5866281 | MDR-TB | lineage4.2.1.1 | None | ERR551453 | MDR-TB | lineage2.2.1 | None | SRR4423168 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR21657655 | MDR-TB | lineage2.2.1 | None | SRR14802215 | MDR-TB | lineage2.2.1 | None | ERR4553684 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR14801476 | MDR-TB | lineage2.2.1 | None | SRR4423167 | Pre-XDR-TB | lineage3 | None | SRR1723852 | MDR-TB | lineage2.2.1 | cn | ERR6362324 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10040179 | MDR-TB | lineage2.2.1 | None | ERR4872348 | MDR-TB | lineage2.2.1 | None | SRR29096267 | RR-TB | lineage2.2.1 | None | SRR29096430 | RR-TB | lineage2.2.1 | None | SRR18714990 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152912 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266490 | XDR-TB | lineage2.2.1 | None | SRR23340136 | MDR-TB | lineage4.2.1 | None | SRR29385250 | MDR-TB | lineage2.2.1 | None | SRR29017457 | MDR-TB | lineage1.1.3 | None | SRR29017202 | MDR-TB | lineage4.1.1.1 | None | ERR13261391 | Pre-XDR-TB | lineage4.3.3 | None | ERR552936 | MDR-TB | lineage2.2.1 | None | SRR29772820 | MDR-TB | lineage2.2.1.1 | None | ERR13284485 | MDR-TB | lineage2.2.1 | None | ERR5865751 | MDR-TB | lineage2.2.1 | None | ERR4553678 | MDR-TB | None | SRR23938662 | Pre-XDR-TB | lineage2.2.1 | None | SRR11871435 | Pre-XDR-TB | lineage2.2.1 | None | SRR1158943 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797861 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR23938681 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800354 | Pre-XDR-TB | lineage2.2.1 | in | ERR4810539 | Pre-XDR-TB | lineage2.2.1 | cn | ERR751561 | MDR-TB | lineage4.3.2 | pe | SRR6280209 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5341326 | MDR-TB | lineage3 | in | SRR5341416 | MDR-TB | lineage3 | in | SRR6824578 | MDR-TB | lineage2.2.1 | cn | SRR1181309 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370521 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284227 | MDR-TB | lineage2.2.1 | None | SAMN02053751 | MDR-TB | lineage4.3.3 | za | SRR29017549 | Pre-XDR-TB | lineage3 | None | ERR11798531 | MDR-TB | lineage2.2.1 | None | SRR1180990 | Pre-XDR-TB | lineage2.2.1 | None | ERR11243571 | MDR-TB | lineage2.2.1 | None | SRR11972303 | Pre-XDR-TB | lineage2.2.1 | None | ERR6362916 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR28394052 | MDR-TB | lineage4.3.3 | None | SRR25827341 | Pre-XDR-TB | lineage3.1.2;lineage4.3.3 | None | SRR29093707 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1654684 | MDR-TB | lineage4.6.1.2 | None | ERR4800480 | Pre-XDR-TB | lineage2.2.1 | in | ERR7911369 | MDR-TB | lineage4.3.3 | None | ERR2307604 | MDR-TB | lineage2.2.1 | None | ERR2516399 | MDR-TB | lineage2.2.1 | be | ERR7737653 | MDR-TB | lineage3 | None | ERR10762283 | MDR-TB | lineage2.2.1 | None | SRR1184127 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865399 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285927 | Pre-XDR-TB | lineage2.2.1 | None | ERR403229 | MDR-TB | lineage2.2.1 | None | ERR13266600 | Pre-XDR-TB | lineage2.2.1 | None | ERR8773618 | MDR-TB | lineage2.1 | None | SRR6353871 | MDR-TB | lineage2.2.1 | None | SRR29096917 | RR-TB | lineage2.2.1 | None | SRR6484920 | MDR-TB | lineage2.2.1 | None | ERR5866282 | MDR-TB | lineage4.2.1.1 | None | ERR5866056 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865969 | MDR-TB | lineage2.2.1 | None | ERR13284449 | MDR-TB | lineage4.6.1.2 | None | ERR13266848 | MDR-TB | lineage1.2.2.2 | None | SRR10040201 | MDR-TB | lineage2.2.1 | None | SRR29017428 | MDR-TB | lineage1.2.2.2 | None | ERR10610172 | MDR-TB | lineage4.1.1.3 | None | SRR1162509 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539019 | MDR-TB | lineage2.2.1 | None | SRR29017120 | MDR-TB | lineage1.2.2.2 | None | SRR11871433 | MDR-TB | lineage2.2.1 | None | ERR4872346 | MDR-TB | lineage2.2.1 | None | ERR5987244 | MDR-TB | lineage4.1.1.3 | None | ERR9119869 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR833074 | MDR-TB | lineage4.3.3 | None | ERR13266893 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266146 | Pre-XDR-TB | lineage2.2.1 | None | SRR29230784 | MDR-TB | lineage4.6.1.2 | None | SRR21576710 | MDR-TB | lineage2.2.1 | None | ERR13284328 | MDR-TB | lineage2.2.1 | None | ERR4798565 | MDR-TB | lineage3.1.2 | in | ERR4798934 | MDR-TB | lineage2.2.1;lineage4 | in | ERR13266753 | Pre-XDR-TB | lineage3.1.2 | None | ERR4799086 | MDR-TB | lineage3.1.2 | in | ERR10610351 | MDR-TB | lineage4.1.1.3 | None |
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