Rv0668 - p.Asn826Thr
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
0 HR-TB
62 MDR-TB
43 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 88 |
| lineage3.1 | 2 |
| lineage3 | 2 |
| lineage1.2.1.2.1;lineage2.2.1 | 1 |
| lineage4.2.1 | 3 |
| lineage2.2.1;lineage3 | 2 |
| lineage4.8 | 5 |
| lineage1.2.1.2.1 | 2 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 107 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6484925 | MDR-TB | lineage2.2.1 | None | SRR6785274 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284477 | MDR-TB | lineage2.2.1 | None | ERR13273365 | MDR-TB | lineage2.2.1 | None | SRR6485074 | MDR-TB | lineage2.2.1 | None | ERR13273384 | MDR-TB | lineage2.2.1 | None | ERR5866519 | MDR-TB | lineage2.2.1 | None | ERR13275955 | MDR-TB | lineage2.2.1 | None | SRR7653001 | MDR-TB | lineage2.2.1 | None | SRR1172091 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553455 | MDR-TB | lineage3.1 | None | ERR2510284 | Pre-XDR-TB | lineage3 | pk | ERR13273204 | MDR-TB | lineage2.2.1 | None | SRR29017013 | MDR-TB | lineage3.1 | None | ERR11067853 | MDR-TB | lineage2.2.1 | None | ERR13284429 | MDR-TB | lineage2.2.1 | None | SRR15014672 | MDR-TB | lineage3 | None | SRR6785293 | MDR-TB | lineage2.2.1 | None | ERR5866499 | MDR-TB | lineage2.2.1 | None | ERR4830361 | MDR-TB | lineage1.2.1.2.1;lineage2.2.1 | vn | SRR1174328 | Pre-XDR-TB | lineage2.2.1 | None | ERR553238 | MDR-TB | lineage2.2.1 | de | ERR2516953 | MDR-TB | lineage2.2.1 | gb | ERR2516866 | MDR-TB | lineage2.2.1 | gb | ERR2516826 | MDR-TB | lineage2.2.1 | gb | ERR2516759 | MDR-TB | lineage2.2.1 | gb | ERR2516973 | MDR-TB | lineage2.2.1 | gb | ERR2516584 | MDR-TB | lineage2.2.1 | nl | SRR6785197 | MDR-TB | lineage2.2.1 | None | SRR13232590 | MDR-TB | lineage4.2.1 | None | SRR29056130 | Pre-XDR-TB | lineage2.2.1 | None | SRR6484845 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865875 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173347 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785185 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173868 | Pre-XDR-TB | lineage2.2.1 | None | SRR6916544 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR1173684 | Pre-XDR-TB | lineage2.2.1 | None | SRR6356999 | MDR-TB | lineage2.2.1 | None | SRR1165265 | MDR-TB | lineage4.8 | None | SRR7652970 | Pre-XDR-TB | lineage2.2.1 | None | ERR13431991 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276051 | MDR-TB | lineage2.2.1 | None | SRR7652978 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276009 | MDR-TB | lineage2.2.1 | None | SRR26112232 | MDR-TB | lineage1.2.1.2.1 | None | SRR7653015 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828041 | MDR-TB | lineage2.2.1 | None | SRR6785549 | MDR-TB | lineage2.2.1 | None | SRR28706477 | MDR-TB | lineage2.2.1 | None | ERR8665793 | MDR-TB | lineage4.2.1 | None | SRR5152942 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153086 | Pre-XDR-TB | lineage2.2.1 | None | SRR7654035 | MDR-TB | lineage2.2.1 | None | SRR1173785 | MDR-TB | lineage4.8 | None | SRR6785156 | MDR-TB | lineage2.2.1 | None | SRR6785192 | MDR-TB | lineage2.2.1 | None | SRR6485078 | RR-TB | lineage2.2.1 | None | SRR1183088 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173278 | MDR-TB | lineage4.8 | None | ERR13276045 | MDR-TB | lineage2.2.1 | None | SRR7653080 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR5153272 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180166 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665794 | MDR-TB | lineage4.2.1 | None | ERR13273314 | MDR-TB | lineage2.2.1 | None | ERR13275918 | MDR-TB | lineage2.2.1 | None | SRR6785362 | MDR-TB | lineage2.2.1 | None | SAMN02403508 | MDR-TB | lineage4.8 | None | SRR1174308 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153078 | Pre-XDR-TB | lineage2.2.1 | None | SRR6485099 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785349 | MDR-TB | lineage2.2.1 | None | SRR6356954 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153617 | Pre-XDR-TB | lineage2.2.1 | None | SRR7655612 | MDR-TB | lineage2.2.1 | None | SRR6484984 | Pre-XDR-TB | lineage2.2.1 | None | ERR13275979 | MDR-TB | lineage2.2.1 | None | ERR3335785 | Pre-XDR-TB | lineage2.2.1 | pk | SRR1167269 | MDR-TB | lineage4.8 | None | SRR6356946 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR13284475 | MDR-TB | lineage2.2.1 | None | SAMN02628485 | Pre-XDR-TB | lineage2.2.1 | ir | SRR671797 | Pre-XDR-TB | lineage2.2.2 | cn | SAMN02628483 | Pre-XDR-TB | lineage2.2.1 | ir | SAMN02628508 | Pre-XDR-TB | lineage2.2.1 | ir | SAMN02628484 | Pre-XDR-TB | lineage2.2.1 | ir | SRR1173552 | Pre-XDR-TB | lineage2.2.1 | None | SRR6485126 | MDR-TB | lineage2.2.1 | None | SRR7655782 | MDR-TB | lineage2.2.1 | None | SRR5153815 | Pre-XDR-TB | lineage2.2.1 | None | ERR552194 | MDR-TB | lineage2.2.1 | az | SRR1172034 | Pre-XDR-TB | lineage2.2.1 | None | SRR26111997 | MDR-TB | lineage1.2.1.2.1 | None | SRR3544733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785539 | MDR-TB | lineage2.2.1 | None | SRR6485116 | MDR-TB | lineage2.2.1 | None | ERR5865874 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517083 | MDR-TB | lineage2.2.1 | gb | SRR6356997 | MDR-TB | lineage2.2.1 | None | ERR5865904 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152944 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865139 | MDR-TB | lineage2.2.1 | None | ERR5865138 | MDR-TB | lineage2.2.1 | None | ERR11082705 | MDR-TB | lineage2.2.1 | None | SRR23938589 | XDR-TB | lineage2.2.1 | None | SRR7653024 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
