Rv0668 - p.Gln1125His
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
0 HR-TB
71 MDR-TB
29 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 42 |
| lineage2.2.2 | 7 |
| lineage4.8 | 10 |
| lineage4.1.2.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.3 | 13 |
| lineage4.1.1.3 | 9 |
| lineage4.1.1.1 | 5 |
| lineage4.1.2.1 | 5 |
| lineage2.2.1;lineage4.7 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.2.1;lineage4.8 | 2 |
| lineage4.3.4.2 | 1 |
| lineage3 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29539773 | Pre-XDR-TB | lineage2.2.1 | None | SRR671821 | Pre-XDR-TB | lineage2.2.1 | cn | DRR130176 | Pre-XDR-TB | lineage2.2.2 | None | SRR15600347 | MDR-TB | lineage4.8 | None | ERR760767 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | ERR4818523 | MDR-TB | lineage1.2.1.2.1 | gb | ERR11043801 | MDR-TB | lineage4.3.3 | None | SRR847803 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR5865181 | MDR-TB | lineage4.3.3 | None | ERR5866140 | Pre-XDR-TB | lineage2.2.1 | None | ERR13243568 | Pre-XDR-TB | lineage2.2.2 | None | ERR2516257 | MDR-TB | lineage4.3.3 | be | ERR13289028 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR24256248 | MDR-TB | lineage2.2.1 | None | ERR5865183 | MDR-TB | lineage4.3.3 | None | ERR1035068 | MDR-TB | lineage4.1.1.1 | za | ERR1035166 | MDR-TB | lineage4.3.3 | None | ERR11082201 | MDR-TB | lineage4.1.2.1 | None | ERR11043921 | Pre-XDR-TB | lineage2.2.1 | None | ERR551919 | MDR-TB | lineage4.8 | None | SRR29539235 | MDR-TB | lineage2.2.1 | None | ERR13285024 | MDR-TB | lineage4.1.2.1 | None | ERR11080930 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29094023 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29096819 | MDR-TB | lineage2.2.2 | None | SRR29539129 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082273 | MDR-TB | lineage2.2.1;lineage4.7 | None | ERR13284811 | MDR-TB | lineage4.1.2.1 | None | ERR11082171 | MDR-TB | lineage4.1.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | SRR29385432 | Pre-XDR-TB | lineage2.2.1 | None | ERR551919_ERR551918 | MDR-TB | lineage4.8 | None | ERR11068618 | MDR-TB | lineage2.2.1 | None | SRR7516422 | MDR-TB | lineage2.2.1 | None | ERR5866141 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832428 | Pre-XDR-TB | lineage2.2.1 | None | ERR2864275 | MDR-TB | lineage4.1.2.1 | pt | ERR12790847 | MDR-TB | lineage2.2.1 | None | ERR11082913 | MDR-TB | lineage4.8 | None | SAMEA2534290 | MDR-TB | lineage4.8 | uz | SRR29096581 | MDR-TB | lineage4.1.1.1 | None | ERR13284564 | MDR-TB | lineage2.2.1 | None | ERR13284758 | MDR-TB | lineage4.8 | None | SRR29539412 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715285 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832250 | MDR-TB | lineage2.2.1 | None | ERR9907768 | MDR-TB | lineage4.3.4.1 | None | ERR5865182 | MDR-TB | lineage4.3.3 | None | ERR1035014 | MDR-TB | lineage2.2.2 | za | ERR5865180 | MDR-TB | lineage4.3.3 | None | SRR6832362 | MDR-TB | lineage2.2.1 | None | SRR29539161 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498653 | MDR-TB | lineage4.3.3 | None | ERR13284871 | MDR-TB | lineage2.2.1 | None | SRR6832114 | MDR-TB | lineage2.2.1 | None | SRR6832561 | MDR-TB | lineage2.2.1 | None | SRR924218 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29681458 | Pre-XDR-TB | lineage2.2.1 | None | ERR13254266 | MDR-TB | lineage4.3.3 | None | ERR11082585 | MDR-TB | lineage4.8 | None | ERR9807028 | MDR-TB | lineage4.1.1.1 | None | ERR13284749 | MDR-TB | lineage4.8 | None | SRR6832564 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799641 | Pre-XDR-TB | lineage4.8 | in | DRR130108 | MDR-TB | lineage4.3.3 | None | SRR6832216 | MDR-TB | lineage2.2.1 | None | SRR24255977 | MDR-TB | lineage2.2.1 | None | SRR28045553 | MDR-TB | lineage3.1.2 | None | ERR8975717 | XDR-TB | lineage4.1.1.3 | None | ERR7975655 | MDR-TB | lineage2.2.1 | None | SAMN01925647 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR3170483 | RR-TB | lineage5.1.4 | gh | ERR2653166 | MDR-TB | lineage4.3.3 | None | ERR13284634 | MDR-TB | lineage4.3.3 | None | ERR5758400 | MDR-TB | lineage2.2.2 | None | SRR24256077 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035004 | MDR-TB | lineage4.1.1.1 | za | SRR6832288 | Pre-XDR-TB | lineage2.2.1 | None | SRR16087907 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832769 | MDR-TB | lineage2.2.1 | None | SRR24256176 | MDR-TB | lineage2.2.1 | None | SRR24256098 | MDR-TB | lineage2.2.1 | None | ERR551918 | MDR-TB | lineage4.8 | None | SRR18715137 | MDR-TB | lineage2.2.1 | None | SRR24256299 | MDR-TB | lineage2.2.1 | None | ERR11243535 | MDR-TB | lineage2.2.1 | None | ERR11243537 | MDR-TB | lineage2.2.1 | None | SRR29539029 | MDR-TB | lineage2.2.1 | None | ERR11082159 | MDR-TB | lineage4.1.2.1;lineage4.8 | None | ERR2307522 | MDR-TB | lineage2.2.1 | None | SRR29539540 | MDR-TB | lineage2.2.1 | None | SRR23862165 | MDR-TB | lineage4.3.3 | None | ERR13258005 | MDR-TB | lineage2.2.2 | None | SRR29093651 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR28393401 | MDR-TB | lineage4.3.4.2 | None | ERR13284736 | MDR-TB | lineage4.1.2.1;lineage4.8 | None | ERR2307469 | MDR-TB | lineage2.2.1 | None | ERR2510417 | MDR-TB | lineage3 | pk | ERR13285091 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4798144 | Pre-XDR-TB | lineage4.3 | in | DRR130066 | MDR-TB | lineage2.2.2 | None | ERR1035003 | MDR-TB | lineage4.1.1.1 | za |
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