lineage | Count |
---|---|
lineage4.3.4.1 | 17 |
lineage2.2.1 | 24 |
lineage4.5 | 1 |
lineage4.2.2.2 | 1 |
La1.2.BCG | 1 |
lineage4.3.3 | 2 |
lineage4.1.3 | 2 |
lineage2.2.1.1 | 1 |
lineage4.1.2.1 | 3 |
lineage1.1.3.1 | 1 |
lineage4.3.3;lineage4.3.4.1 | 1 |
1 |
spoligotype | Count |
---|---|
None | 55 |
ID | Drug resistance | Lineage | Country iso2 | ERR4812518 | MDR-TB | lineage4.3.4.1 | pe | ERR7911418 | MDR-TB | lineage2.2.1 | us | SRR21576558 | MDR-TB | lineage4.5 | None | ERR10680181 | MDR-TB | lineage2.2.1 | None | ERR4812989 | MDR-TB | lineage4.3.4.1 | pe | ERR3078000 | MDR-TB | lineage4.2.2.2 | None | SRR29385436 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420456 | MDR-TB | lineage2.2.1 | None | SRR6824570 | MDR-TB | lineage2.2.1 | cn | DRR029469 | Other | La1.2.BCG | None | ERR2184440 | MDR-TB | lineage4.3.4.1 | pe | ERR3287754 | MDR-TB | lineage4.3.4.1 | pe | ERR3287311 | MDR-TB | lineage4.3.4.1 | pe | ERR4813719 | MDR-TB | lineage4.3.4.1 | None | SRR29231706 | MDR-TB | lineage4.3.3 | None | SRR7517808 | MDR-TB | lineage4.1.3 | None | ERR5866427 | MDR-TB | lineage2.2.1 | None | SRR1723778 | MDR-TB | lineage2.2.1 | cn | ERR7737866 | MDR-TB | lineage2.2.1.1 | None | SRR10808574 | MDR-TB | lineage4.3.4.1 | None | SAMEA2534793 | MDR-TB | lineage2.2.1 | uz | SRR19276595 | MDR-TB | lineage4.3.4.1 | None | SRR13423580 | MDR-TB | lineage2.2.1 | None | ERR2706983 | MDR-TB | lineage4.3.3 | cd | SRR21576570 | MDR-TB | lineage2.2.1 | None | ERR552646 | MDR-TB | lineage2.2.1 | None | ERR2510215 | MDR-TB | lineage4.3.4.1 | pe | SRR15723205 | MDR-TB | lineage2.2.1 | None | SRR28393803 | MDR-TB | lineage4.1.2.1 | None | SRR18693872 | MDR-TB | lineage1.1.3.1 | None | SRR25515411 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866426 | MDR-TB | lineage2.2.1 | None | SRR28394251 | MDR-TB | lineage4.3.4.1 | None | SRR28393252 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | None | ERR4811040 | RR-TB | lineage2.2.1 | cn | SRR25515066 | Pre-XDR-TB | lineage2.2.1 | None | ERR13258447 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420731 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290954 | RR-TB | lineage2.2.1 | None | ERR2510218 | MDR-TB | lineage4.3.4.1 | pe | ERR4553788 | MDR-TB | None | ERR4812289 | MDR-TB | lineage4.3.4.1 | None | SRR12420563 | MDR-TB | lineage2.2.1 | None | ERR12118029 | MDR-TB | lineage4.3.4.1 | None | SRR5535684 | HR-TB | lineage4.1.3 | None | SRR9738510 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR8774576 | MDR-TB | lineage2.2.1 | None | ERR4812358 | MDR-TB | lineage4.3.4.1 | pe | ERR4811880 | Pre-XDR-TB | lineage4.3.4.1 | pe | ERR779878 | MDR-TB | lineage4.3.4.1 | pe | DRR130143 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822353 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812884 | MDR-TB | lineage4.1.2.1 | pe | ERR6866294 | MDR-TB | lineage4.3.4.1 | None | ERR552645_ERR552646 | MDR-TB | lineage2.2.1 | None |
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