lineage | Count |
---|---|
lineage2.2.1 | 18 |
lineage4.3.2.1 | 2 |
lineage4.5 | 1 |
lineage4.3.4.1 | 16 |
lineage4 | 1 |
lineage4.1.2.1 | 2 |
lineage4.8 | 5 |
lineage3.1.2.1 | 1 |
lineage4.9 | 1 |
lineage3 | 1 |
lineage3.1.2 | 1 |
lineage4.1.3 | 2 |
lineage4.3.3 | 1 |
lineage4.2.2.2 | 1 |
1 | |
lineage1.2.1.2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.6.1.1 | 1 |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | SRR21576570 | MDR-TB | lineage2.2.1 | None | SRR2101551 | Sensitive | lineage4.3.2.1 | None | SRR21576558 | MDR-TB | lineage4.5 | None | ERR4813719 | MDR-TB | lineage4.3.4.1 | None | ERR2228985 | Sensitive | lineage4 | None | ERR4812884 | MDR-TB | lineage4.1.2.1 | pe | ERR4812989 | MDR-TB | lineage4.3.4.1 | pe | ERR2229037 | Sensitive | lineage4.8 | None | SAMEA2534793 | MDR-TB | lineage2.2.1 | uz | ERR4816180 | Sensitive | lineage3.1.2.1 | None | ERR2229424 | Sensitive | lineage4.8 | None | ERR2184440 | MDR-TB | lineage4.3.4.1 | pe | ERR2229688 | Sensitive | lineage4.8 | None | ERR2229698 | RR-TB | lineage4.8 | None | ERR2510218 | MDR-TB | lineage4.3.4.1 | pe | ERR4816783 | Sensitive | lineage4.9 | None | SRR1723778 | MDR-TB | lineage2.2.1 | cn | ERR2510215 | MDR-TB | lineage4.3.4.1 | pe | ERR4822353 | Pre-XDR-TB | lineage2.2.1 | None | ERR2514455 | Other | lineage3 | None | ERR2515097 | Sensitive | lineage3.1.2 | None | SRR5535684 | MDR-TB | lineage4.1.3 | None | ERR2706983 | MDR-TB | lineage4.3.3 | cd | SRR7646020 | Pre-XDR-TB | lineage2.2.1 | None | SRR6484931 | MDR-TB | lineage4.8 | None | ERR3078000 | MDR-TB | lineage4.2.2.2 | None | SRR6982400 | Other | lineage2.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6824570 | MDR-TB | lineage2.2.1 | cn | SRR9738510 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR7517808 | MDR-TB | lineage4.1.3 | None | ERR4811040 | RR-TB | lineage2.2.1 | cn | ERR10680181 | MDR-TB | lineage2.2.1 | None | ERR3287311 | MDR-TB | lineage4.3.4.1 | pe | ERR3287754 | MDR-TB | lineage4.3.4.1 | pe | ERR4553788 | MDR-TB | None | DRR130143 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812358 | MDR-TB | lineage4.3.4.1 | pe | ERR4811880 | Pre-XDR-TB | lineage4.3.4.1 | pe | ERR4812289 | MDR-TB | lineage4.3.4.1 | None | ERR6336759 | Other | lineage1.2.1.2.1 | None | ERR5866154 | MDR-TB | lineage2.2.1 | None | ERR5866427 | MDR-TB | lineage2.2.1 | None | ERR4812518 | MDR-TB | lineage4.3.4.1 | pe | ERR5866426 | MDR-TB | lineage2.2.1 | None | ERR7911418 | MDR-TB | lineage2.2.1 | us | ERR779874 | MDR-TB | lineage4.3.4.1 | pe | ERR6866294 | MDR-TB | lineage4.3.4.1 | None | ERR7737866 | MDR-TB | lineage2.2.1.1 | None | ERR779878 | MDR-TB | lineage4.3.4.1 | pe | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR8774576 | MDR-TB | lineage2.2.1 | None | SRR10808574 | MDR-TB | lineage4.3.4.1 | None | SRR15723205 | MDR-TB | lineage2.2.1 | None | SRR12199425 | Sensitive | lineage2.2.1 | None | SRR13423580 | MDR-TB | lineage2.2.1 | None | SRR18693872 | MDR-TB | lineage1.1.3.1 | None | SRR19276595 | MDR-TB | lineage4.3.4.1 | None |
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