lineage | Count |
---|---|
lineage4.5 | 2 |
lineage2.2.1 | 49 |
lineage4.3.2 | 22 |
lineage2.2.1.1 | 8 |
lineage4.3.3 | 7 |
lineage1.1.1.1;lineage2.2.1 | 2 |
lineage3 | 4 |
lineage4.3.4.1 | 3 |
lineage4.2.1 | 8 |
lineage4.6.2.2 | 4 |
lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 110 |
ID | Drug resistance | Lineage | Country iso2 | ERR11044027 | MDR-TB | lineage4.5 | None | SRR5153229 | MDR-TB | lineage2.2.1 | None | ERR2707229 | MDR-TB | lineage4.3.2 | cd | ERR2707130 | MDR-TB | lineage4.3.2 | cd | SRR21277825 | MDR-TB | lineage2.2.1.1 | None | ERR4822285 | XDR-TB | lineage2.2.1 | None | SRR29385470 | MDR-TB | lineage2.2.1.1 | None | SRR29231697 | MDR-TB | lineage4.3.2 | None | SRR29772646 | MDR-TB | lineage2.2.1 | None | SRR25207146 | MDR-TB | lineage2.2.1 | None | SRR611419 | HR-TB | lineage2.2.1 | None | ERR2503504 | MDR-TB | lineage4.3.3 | fi | ERR11043735 | XDR-TB | lineage2.2.1 | None | SRR29230994 | MDR-TB | lineage4.3.2 | None | ERR4828444 | MDR-TB | lineage1.1.1.1;lineage2.2.1 | vn | SRR29385258 | MDR-TB | lineage2.2.1.1 | None | SRR3105785 | Pre-XDR-TB | lineage3 | None | ERR551575 | HR-TB | lineage2.2.1 | None | SRR16370468 | MDR-TB | lineage4.3.4.1 | None | ERR2706997 | MDR-TB | lineage4.3.2 | cd | ERR5866112 | MDR-TB | lineage2.2.1 | None | SRR27069463 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162841 | MDR-TB | lineage4.3.3 | None | ERR12117904 | MDR-TB | lineage4.3.4.1 | None | ERR5866016 | MDR-TB | lineage2.2.1 | None | ERR551445 | RR-TB | lineage2.2.1 | None | ERR4423616 | Pre-XDR-TB | lineage4.3.2 | None | SRR8651658 | Pre-XDR-TB | lineage2.2.1 | cn | ERR553098 | MDR-TB | lineage2.2.1 | None | ERR5864405 | MDR-TB | lineage4.2.1 | None | ERR5864406 | MDR-TB | lineage4.2.1 | None | SRR5535862 | MDR-TB | lineage4.3.2 | None | ERR5864404 | MDR-TB | lineage4.2.1 | None | ERR13276394 | XDR-TB | lineage2.2.1 | None | ERR550895 | MDR-TB | lineage2.2.1 | None | ERR2707028 | MDR-TB | lineage4.3.2 | cd | ERR550895_ERR550894 | MDR-TB | lineage2.2.1 | None | ERR9119575 | MDR-TB | lineage4.6.2.2 | None | ERR4799500 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR551443 | MDR-TB | lineage2.2.1 | None | SRR7517738 | MDR-TB | lineage2.2.1 | None | SRR26936943 | MDR-TB | lineage2.2.1 | None | ERR4872126 | MDR-TB | lineage4.6.2.2 | None | ERR5866017 | MDR-TB | lineage2.2.1 | None | SRR3105773 | RR-TB | lineage3 | None | ERR553097 | MDR-TB | lineage2.2.1 | None | SRR3724951 | MDR-TB | lineage4.3.2 | cd | SRR29231778 | MDR-TB | lineage4.3.2 | None | SRR29231742 | MDR-TB | lineage4.3.2 | None | SAMEA2533894 | MDR-TB | lineage2.2.1 | uz | ERR13276183 | MDR-TB | lineage4.5 | None | SRR29231657 | MDR-TB | lineage4.3.2 | None | SRR21887669 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR2516501 | MDR-TB | lineage2.2.1 | pe | SRR29051193 | MDR-TB | lineage1.1.1.1;lineage2.2.1 | None | ERR4797001 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR551372_ERR551373 | MDR-TB | lineage2.2.1 | None | SRR611420 | HR-TB | lineage2.2.1 | None | ERR1035102 | Pre-XDR-TB | lineage2.2.1 | vn | ERR2307555 | MDR-TB | lineage2.2.1 | None | SAMN02414885 | MDR-TB | lineage4.3.3 | None | SRR29231565 | MDR-TB | lineage4.3.2 | None | ERR4813693 | MDR-TB | lineage4.3.3 | None | SRR29539689 | MDR-TB | lineage2.2.1 | None | ERR2516613 | MDR-TB | lineage2.2.1 | nl | SAMEA2533547 | MDR-TB | lineage2.2.1 | uz | ERR5864403 | MDR-TB | lineage4.2.1 | None | SRR18715349 | MDR-TB | lineage4.1.2.1 | None | ERR2516716 | MDR-TB | lineage2.2.1 | pe | SRR21576735 | MDR-TB | lineage2.2.1 | None | ERR5866110 | MDR-TB | lineage2.2.1 | None | SAMEA2535134 | MDR-TB | lineage2.2.1 | uz | SRR29231867 | MDR-TB | lineage4.3.2 | None | ERR4872177 | MDR-TB | lineage4.6.2.2 | None | ERR551475 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969521 | MDR-TB | lineage2.2.1.1 | None | ERR553098_ERR553097_ERR553096 | MDR-TB | lineage2.2.1 | None | ERR9125123 | Pre-XDR-TB | lineage3 | None | ERR2707182 | MDR-TB | lineage4.3.2 | cd | SRR16058593 | Pre-XDR-TB | lineage3 | None | ERR5864400 | MDR-TB | lineage4.2.1 | None | SRR13120441 | MDR-TB | lineage2.2.1 | None | SRR22137476 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231704 | MDR-TB | lineage4.3.2 | None | ERR2706958 | MDR-TB | lineage4.3.2 | cd | ERR5864402 | MDR-TB | lineage4.2.1 | None | ERR7910888 | MDR-TB | lineage4.3.4.1 | pe | ERR2707090 | MDR-TB | lineage4.3.2 | cd | ERR7737783 | MDR-TB | lineage2.2.1 | None | ERR551372 | MDR-TB | lineage2.2.1 | None | ERR551373 | MDR-TB | lineage2.2.1 | None | ERR551444 | MDR-TB | lineage2.2.1 | None | SRR26558620 | MDR-TB | lineage2.2.1 | None | ERR5866111 | MDR-TB | lineage2.2.1 | None | ERR2706976 | MDR-TB | lineage4.3.2 | cd | ERR5864401 | MDR-TB | lineage4.2.1 | None | ERR2707046 | MDR-TB | lineage4.3.2 | cd | ERR7737672 | MDR-TB | lineage2.2.1 | None | ERR9119532 | MDR-TB | lineage4.6.2.2 | None | SRR1166872 | MDR-TB | lineage4.3.3 | None | ERR12790852 | MDR-TB | lineage4.3.3 | None | ERR4276865 | XDR-TB | lineage2.2.1 | None | SRR611421 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911715 | MDR-TB | lineage4.2.1 | us | ERR4812814 | MDR-TB | lineage4.3.3 | None | ERR553367 | HR-TB | lineage2.2.1 | None | ERR2706956 | MDR-TB | lineage4.3.2 | cd | ERR2706979 | MDR-TB | lineage4.3.2 | cd | ERR7737839 | MDR-TB | lineage2.2.1 | None | ERR4781456 | Pre-XDR-TB | lineage2.2.1.1 | None |
---|