ERR1034783
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
SRR21732310
|
MDR-TB
|
lineage3
|
None
|
ERR10762289
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR16370496
|
MDR-TB
|
lineage4.8
|
None
|
ERR9907690
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4813678
|
MDR-TB
|
lineage4.8
|
None
|
ERR4423511
|
HR-TB
|
lineage2.2.1
|
None
|
ERR13285833
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR9907683
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2307622
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11798653
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR22249805
|
MDR-TB
|
lineage3
|
None
|
SRR28393408
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR1199122
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
SRR1159029
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29772561
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25206890
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4813338
|
MDR-TB
|
lineage4.8
|
None
|
ERR4813728
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4800565
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR10040352
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10379889
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR688032
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR2706926
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
SRR25206955
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13264949
|
RR-TB
|
lineage3.1.1
|
None
|
ERR11082615
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7910864
|
MDR-TB
|
lineage4.8
|
pe
|
SRR10808558
|
MDR-TB
|
lineage4.8
|
None
|
ERR6052065
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28389865
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4822609
|
Pre-XDR-TB
|
lineage3.1
|
de
|
ERR13260231
|
MDR-TB
|
lineage4.8
|
None
|
ERR10762238
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4872273
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR18002906
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21277281
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23310997
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR13260132
|
MDR-TB
|
lineage4.8
|
None
|
SRR6807688
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR28119841
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR13870382
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR13870411
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR15316349
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10397104
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR4810928
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR13285826
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4813452
|
MDR-TB
|
lineage4.8
|
None
|
SRR1166144
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR28705416
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR10762242
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR16087888
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13260661
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR22461704
|
MDR-TB
|
lineage4.8
|
None
|
SRR28394100
|
MDR-TB
|
lineage4.8
|
None
|
SRR28389884
|
Pre-XDR-TB
|
lineage2.2.1.2;lineage4.1.1.3
|
None
|
SRR28683941
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR2510522
|
MDR-TB
|
lineage3
|
pk
|
ERR2510556
|
MDR-TB
|
lineage3
|
pk
|
SRR1166201
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR2510148
|
MDR-TB
|
lineage4.8
|
pe
|
SRR3743377
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR13260571
|
MDR-TB
|
lineage4.8
|
None
|
ERR403214
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1180994
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14782749
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR15217983
|
MDR-TB
|
lineage4.8
|
None
|
SRR24710163
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23938691
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1168978
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR6824702
|
MDR-TB
|
lineage2.2.1;lineage4.4.2
|
cn
|
SRR14782381
|
HR-TB
|
lineage4.2.1
|
None
|
ERR4822382
|
Pre-XDR-TB
|
lineage2.2.1
|
kg
|
SRR28389880
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR10762491
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR3287504
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR13253285
|
MDR-TB
|
lineage4.8
|
None
|
ERR11798654
|
MDR-TB
|
lineage4.2.1
|
None
|
DRR130127
|
MDR-TB
|
lineage4.8
|
None
|
SRR10379983
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR21747045
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28393264
|
MDR-TB
|
lineage4.8
|
None
|
SRR10040455
|
MDR-TB
|
lineage4.5
|
None
|
SRR14802222
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR9907669
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR25207086
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911047
|
Pre-XDR-TB
|
lineage4.2.1
|
md
|
ERR1654681
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4276907
|
Pre-XDR-TB
|
lineage3.1
|
None
|
ERR4822606
|
Pre-XDR-TB
|
lineage3.1
|
de
|
ERR6052026
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29341579
|
RR-TB
|
lineage3.1.1
|
None
|
SRR13870418
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR18054798
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5153888
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR6879046
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4828983
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SAMN02584622
|
MDR-TB
|
lineage4.2.1
|
md
|
ERR9907700
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4830631
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29289131
|
RR-TB
|
lineage3
|
None
|
ERR5979435
|
Pre-XDR-TB
|
lineage3.1
|
None
|
ERR7910980
|
MDR-TB
|
lineage4.2.1
|
md
|
SRR15316205
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9907803
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR7910982
|
MDR-TB
|
lineage4.8
|
pe
|
SRR13870412
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR14782342
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR28393520
|
MDR-TB
|
lineage4.8
|
None
|
SRR5894886
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6832061
|
MDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
SRR24710216
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207094
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13285803
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR3273205
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813372
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
SRR671735
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR2707083
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
SRR23938635
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4810473
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR5153855
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.2.1
|
None
|
ERR2516453
|
Pre-XDR-TB
|
La1.7.1
|
nl
|
ERR4812352
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR12118034
|
MDR-TB
|
lineage4.8
|
None
|
SRR6831710
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1169016
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR7910985
|
MDR-TB
|
lineage4.8
|
None
|
SRR14801995
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR9907761
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR4812903
|
MDR-TB
|
lineage4.8
|
pe
|
ERR4812957
|
MDR-TB
|
lineage4.8
|
pe
|
SRR28393944
|
MDR-TB
|
lineage4.8
|
None
|
SRR28394268
|
MDR-TB
|
lineage4
|
None
|
SRR28389885
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR1034600
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR2510365
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR13290690
|
RR-TB
|
lineage2.2.1
|
None
|
ERR13260241
|
MDR-TB
|
lineage4.8
|
None
|
ERR4423512
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28498548
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR9119883
|
RR-TB
|
lineage3.1.1
|
None
|
SRR6807675
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR29341516
|
RR-TB
|
lineage3.1.1
|
None
|
SRR27069440
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516890
|
MDR-TB
|
lineage3
|
gb
|
ERR2516631
|
MDR-TB
|
lineage4.8
|
pe
|
ERR3287454
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR22424939
|
Pre-XDR-TB
|
lineage1.1.3.2
|
None
|
SRR28393653
|
MDR-TB
|
lineage4.8
|
None
|
ERR13266705
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR28393757
|
MDR-TB
|
lineage4.8
|
None
|
ERR4011082
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10380121
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR13291122
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11798655
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR7645933
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR9907722
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR13870429
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR7646033
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR8375802
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13191096
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10762441
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR7911270
|
MDR-TB
|
lineage4.2.1
|
md
|
SAMN02584631
|
MDR-TB
|
lineage4.2.1
|
md
|
ERR4811292
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR2510700
|
Pre-XDR-TB
|
lineage1.1.3.3
|
pk
|
SRR671743
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR1181109
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813090
|
MDR-TB
|
lineage4.8
|
pe
|
ERR2184455
|
MDR-TB
|
lineage4.8
|
pe
|
SRR10380122
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR10762298
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR12882767
|
RR-TB
|
lineage3.1.1
|
None
|
SRR6807700
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR11798652
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4813172
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
ERR9125674
|
RR-TB
|
lineage3.1.1
|
None
|
ERR3287544
|
MDR-TB
|
lineage4.8
|
None
|
SRR8439315
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710272
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR775301
|
MDR-TB
|
lineage4.8
|
pe
|
ERR13260236
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR13285729
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR25827852
|
XDR-TB
|
lineage3
|
None
|
SRR1162502
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28393549
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR28351409
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4822610
|
Pre-XDR-TB
|
lineage3.1
|
de
|
SRR23938618
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29093808
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207022
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3287540
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR3287559
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR5979431
|
RR-TB
|
lineage3
|
None
|
ERR13265196
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR4813103
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
SRR10040284
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14782159
|
RR-TB
|
lineage2.2.1;lineage4.2.1
|
None
|
ERR9907684
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR28498407
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR13292534
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR7910962
|
MDR-TB
|
lineage4.2.1
|
md
|
SRR23310913
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR13232644
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28351522
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4829708
|
MDR-TB
|
lineage4.2.1
|
it
|
SRR24710209
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13285793
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4813018
|
MDR-TB
|
lineage4.8
|
None
|
ERR13194665
|
MDR-TB
|
lineage2.2.2
|
None
|
ERR4810483
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR28706467
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMN02419542
|
MDR-TB
|
lineage2.2.1
|
by
|
SRR24783283
|
RR-TB
|
lineage4.6.2.2
|
None
|
SRR28394244
|
MDR-TB
|
lineage4.8
|
None
|
ERR11488406
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR10379890
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR13266744
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR4811956
|
MDR-TB
|
lineage4.8
|
pe
|
SRR16058356
|
RR-TB
|
lineage3.1.1
|
None
|
ERR2516545
|
Pre-XDR-TB
|
La1.7.1
|
nl
|
ERR2516550
|
MDR-TB
|
lineage4.3.3
|
nl
|