Rv0668 - p.Leu516Pro
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
32 RR-TB
11 HR-TB
448 MDR-TB
157 Pre-XDR-TB
7 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 477 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.3 | 11 |
| lineage4.1.2.1 | 33 |
| lineage1.1.2 | 5 |
| lineage4.3.4.1 | 2 |
| lineage4.2.1 | 6 |
| lineage4.7 | 10 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2.1.1 | 8 |
| lineage4.8 | 24 |
| lineage3.1.2.1 | 3 |
| lineage4.5 | 2 |
| lineage3.1.2.1;lineage4.3.4.2 | 2 |
| lineage4.1 | 2 |
| lineage2.2.1.1;lineage4.1.1.3 | 1 |
| lineage3 | 15 |
| lineage2.2.2 | 2 |
| lineage1.2.1.2.1 | 3 |
| lineage4.1.1.3 | 6 |
| lineage4.6.4 | 4 |
| lineage4.4.2 | 1 |
| lineage4.2.2 | 4 |
| lineage2.2.1;lineage3 | 2 |
| lineage3.1 | 1 |
| lineage1.2.2.2 | 4 |
| lineage3.1.2 | 4 |
| lineage2.2.1.2 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4 | 6 |
| lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.3.4.1 | 1 |
| lineage2.2.1;lineage4.8 | 2 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4.3.4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage4.9 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2.1 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 659 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4276884 | MDR-TB | lineage2.2.1 | None | ERR4012000 | MDR-TB | lineage4.3.4.2.1 | None | ERR2516214 | MDR-TB | lineage2.2.1 | be | ERR1035304 | MDR-TB | lineage4.3.3 | br | ERR9125036 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380187 | MDR-TB | lineage2.2.1 | None | ERR1034679 | MDR-TB | lineage4.3.3 | co | SRR12420275 | RR-TB | lineage2.2.1 | None | SRR671727 | MDR-TB | lineage2.2.1 | cn | SRR7516427 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872191 | MDR-TB | lineage4.1.2.1 | None | SRR21031706 | MDR-TB | lineage2.2.1 | None | ERR9119589 | MDR-TB | lineage4.1.2.1 | None | SRR21887768 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166870 | MDR-TB | lineage2.2.1 | None | SRR15014776 | MDR-TB | lineage1.1.2 | None | SRR1167080 | MDR-TB | lineage2.2.1 | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | SRR29772373 | MDR-TB | lineage1.1.2 | None | ERR3794530 | MDR-TB | lineage2.2.1 | None | ERR13261243 | Pre-XDR-TB | lineage2.2.1 | None | SRR1577806 | MDR-TB | lineage2.2.1 | None | ERR10748226 | MDR-TB | lineage2.2.1 | None | SRR12199484 | MDR-TB | lineage2.2.1 | None | ERR13265378 | MDR-TB | lineage2.2.1 | None | ERR2041690 | MDR-TB | lineage2.2.1 | None | ERR13265171 | MDR-TB | lineage2.2.1 | None | SRR1723808 | MDR-TB | lineage2.2.1 | cn | SRR1723841 | MDR-TB | lineage2.2.1 | cn | SRR15014687 | MDR-TB | lineage2.2.1 | None | ERR3256203 | MDR-TB | lineage4.3.4.1 | ph | ERR11043480 | MDR-TB | lineage4.2.1 | None | ERR13265367 | MDR-TB | lineage2.2.1 | None | ERR4872292 | MDR-TB | lineage2.2.1 | None | SRR29273952 | Pre-XDR-TB | lineage4.7 | None | ERR13059968 | MDR-TB | lineage4.1.2.1 | None | SRR11567822 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265247 | MDR-TB | lineage2.2.1 | None | ERR13267119 | HR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR13292581 | Pre-XDR-TB | lineage2.2.1 | None | SRR069957 | MDR-TB | lineage2.2.1.1 | None | SRR3743488 | MDR-TB | lineage2.2.1 | None | SRR1049688 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798575 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265966 | MDR-TB | lineage2.2.1 | None | ERR11043498 | MDR-TB | lineage4.2.1 | None | SRR1003112 | RR-TB | lineage4.8 | None | SRR15368774 | MDR-TB | lineage2.2.1 | None | ERR13430438 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265123 | MDR-TB | lineage2.2.1 | None | SRR12420462 | RR-TB | lineage2.2.1 | None | ERR10748176 | MDR-TB | lineage2.2.1 | None | ERR13266195 | MDR-TB | lineage2.2.1 | None | ERR13265525 | MDR-TB | lineage2.2.1 | None | ERR11043037 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265110 | MDR-TB | lineage2.2.1 | None | ERR13284645 | MDR-TB | lineage3.1.2.1 | None | SRR6479539 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261250 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265483 | MDR-TB | lineage2.2.1 | None | ERR5865046 | MDR-TB | lineage2.2.1 | None | ERR13249495 | MDR-TB | lineage4.5 | None | ERR13265787 | MDR-TB | lineage2.2.1 | None | SRR26937092 | MDR-TB | lineage2.2.1 | None | SRR1062883 | MDR-TB | lineage3.1.2.1;lineage4.3.4.2 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972386 | MDR-TB | lineage2.2.1 | None | ERR13265692 | MDR-TB | lineage2.2.1 | None | ERR13260239 | MDR-TB | lineage4.3.3 | None | ERR13290608 | MDR-TB | lineage2.2.1 | None | SRR19276637 | MDR-TB | lineage4.3.3 | None | ERR10465859 | MDR-TB | lineage2.2.1 | None | SRR29093571 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887702 | Pre-XDR-TB | lineage2.2.1 | None | SRR6914119 | MDR-TB | lineage2.2.1 | None | SRR7645853 | MDR-TB | lineage2.2.1 | None | ERR13265782 | MDR-TB | lineage2.2.1 | None | ERR13265636 | MDR-TB | lineage2.2.1 | None | ERR13264979 | MDR-TB | lineage2.2.1 | None | SRR14781850 | MDR-TB | lineage2.2.1 | None | SRR9971296 | MDR-TB | lineage4.8 | None | ERR10762261 | MDR-TB | lineage2.2.1 | None | ERR13265131 | MDR-TB | lineage2.2.1 | None | ERR13284082 | Pre-XDR-TB | lineage2.2.1 | None | ERR13264983 | MDR-TB | lineage2.2.1 | None | ERR13265135 | MDR-TB | lineage2.2.1 | None | SRR1165437 | MDR-TB | lineage2.2.1 | None | ERR13285008 | Pre-XDR-TB | lineage4.1 | None | SRR1166268 | MDR-TB | lineage2.2.1 | None | ERR2041694 | MDR-TB | lineage2.2.1 | None | SRR16156738 | MDR-TB | lineage2.2.1.1;lineage4.1.1.3 | None | ERR2510245 | MDR-TB | lineage3 | pk | ERR13265402 | MDR-TB | lineage2.2.1 | None | ERR2510361 | Pre-XDR-TB | lineage2.2.1 | pk | ERR13265776 | MDR-TB | lineage2.2.1 | None | ERR15686445 | RR-TB | lineage4.8 | None | ERR3273142 | MDR-TB | lineage2.2.2 | None | ERR4796836 | MDR-TB | lineage2.2.1 | in | ERR13265383 | MDR-TB | lineage2.2.1 | None | ERR552165 | Pre-XDR-TB | lineage2.2.1 | None | SRR29385290 | MDR-TB | lineage2.2.1 | None | ERR4798738 | XDR-TB | lineage2.2.1 | in | SRR11567811 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265599 | MDR-TB | lineage2.2.1 | None | ERR13276318 | MDR-TB | lineage2.2.1 | None | ERR13281467 | Pre-XDR-TB | lineage2.2.1 | None | SRR24466741 | MDR-TB | lineage4.1.2.1 | None | ERR4799635 | Pre-XDR-TB | lineage2.2.1 | in | ERR13265757 | MDR-TB | lineage2.2.1 | None | SRR20632797 | MDR-TB | lineage2.2.1 | None | ERR5917761 | Pre-XDR-TB | lineage2.2.1 | by | SRR20632776 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865946 | MDR-TB | lineage2.2.1 | None | SRR6831804 | MDR-TB | lineage2.2.1 | None | SRR14801606 | MDR-TB | lineage2.2.1 | None | ERR7910873 | MDR-TB | lineage4.3.3 | pe | SRR1003131 | RR-TB | lineage4.8 | None | SRR28646115 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11081287 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887772 | MDR-TB | lineage2.2.1 | None | ERR3256220 | MDR-TB | lineage1.2.1.2.1 | ph | SRR8380876 | MDR-TB | lineage1.1.2 | in | SRR7645825 | Pre-XDR-TB | lineage2.2.1 | None | ERR3273123 | MDR-TB | lineage2.2.1 | None | SRR10040172 | MDR-TB | lineage2.2.1 | None | SRR10869239 | MDR-TB | lineage4.1.1.3 | None | ERR1034617 | Pre-XDR-TB | lineage3 | pk | ERR2041702 | MDR-TB | lineage4.7 | None | ERR10762232 | MDR-TB | lineage2.2.1 | None | ERR13265009 | MDR-TB | lineage2.2.1 | None | ERR13265973 | MDR-TB | lineage2.2.1 | None | ERR13266310 | MDR-TB | lineage2.2.1 | None | SRR7592324 | MDR-TB | lineage4.1.2.1 | None | ERR4872078 | MDR-TB | lineage4.6.4 | None | ERR5866472 | MDR-TB | lineage2.2.1 | None | SRR23310838 | Pre-XDR-TB | lineage2.2.1 | None | ERR7975662 | MDR-TB | lineage2.2.1 | None | ERR3273207 | MDR-TB | lineage2.2.1.1 | None | SRR26936938 | MDR-TB | lineage4.4.2 | None | SRR12420431 | MDR-TB | lineage2.2.1 | None | ERR11044163 | MDR-TB | lineage2.2.1 | None | ERR9120110 | MDR-TB | lineage4.1.1.3 | None | ERR13273380 | MDR-TB | lineage2.2.1 | None | ERR13284625 | MDR-TB | lineage4.2.1 | None | SRR13232647 | MDR-TB | lineage2.2.1 | None | SRR29096631 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662458 | MDR-TB | lineage4.2.2 | None | SRR25206871 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265526 | MDR-TB | lineage2.2.1 | None | SRR1175338 | MDR-TB | lineage2.2.1 | None | ERR13285131 | MDR-TB | lineage4.1.2.1 | None | SRR1010997 | RR-TB | lineage4.8 | None | ERR11081612 | MDR-TB | lineage2.2.1 | None | ERR13265399 | MDR-TB | lineage2.2.1 | None | ERR13265512 | MDR-TB | lineage2.2.1 | None | ERR13290781 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266281 | MDR-TB | lineage2.2.1 | None | ERR10762373 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068884 | MDR-TB | lineage4.1.2.1 | None | SRR1062914 | RR-TB | lineage4.8 | None | SRR10040183 | MDR-TB | lineage2.2.1 | None | ERR2864261 | HR-TB | lineage2.2.1 | None | ERR13266628 | Pre-XDR-TB | lineage2.2.1 | None | SRR29016830 | MDR-TB | lineage2.2.1 | None | ERR13265564 | MDR-TB | lineage2.2.1 | None | SRR29093496 | MDR-TB | lineage4.3.4.2.1 | None | ERR13266348 | MDR-TB | lineage2.2.1 | None | SRR7755739 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014694 | MDR-TB | lineage2.2.1 | None | SRR29681328 | HR-TB | lineage2.2.1 | None | SRR21576622 | MDR-TB | lineage2.2.1 | None | SRR30180384 | MDR-TB | lineage2.2.1 | None | SRR28467043 | RR-TB | lineage2.2.1 | None | SRR25207162 | MDR-TB | lineage2.2.1 | None | SRR22873602 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800162 | Pre-XDR-TB | lineage2.2.1 | None | ERR8773992 | MDR-TB | lineage2.2.1 | None | ERR13265100 | MDR-TB | lineage2.2.1 | None | SRR15316228 | MDR-TB | lineage2.2.1 | None | ERR13265146 | MDR-TB | lineage2.2.1 | None | ERR11003793 | MDR-TB | lineage4.2.1 | None | SRR23310837 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265136 | MDR-TB | lineage2.2.1 | None | SRR5153926 | MDR-TB | lineage2.2.1 | None | ERR1035298 | MDR-TB | lineage4.1.2.1 | br | SRR13355775 | MDR-TB | lineage2.2.1 | None | ERR552238 | RR-TB | lineage2.2.1 | None | SRR25207306 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865049 | MDR-TB | lineage2.2.1 | None | ERR11044471 | MDR-TB | lineage4.1.2.1 | None | SRR1003130 | RR-TB | lineage4.8 | None | SRR5486882 | MDR-TB | lineage4.1.2.1 | None | SRR29341557 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207323 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420418 | RR-TB | lineage2.2.1 | None | SRR12420444 | RR-TB | lineage2.2.1 | None | ERR13276144 | MDR-TB | lineage4.1.2.1 | None | SRR12006585 | MDR-TB | lineage1.2.1.2.1 | None | SRR22251790 | MDR-TB | lineage2.2.1 | None | ERR13265056 | MDR-TB | lineage2.2.1 | None | ERR13265250 | MDR-TB | lineage2.2.1 | None | ERR13266692 | Pre-XDR-TB | lineage3 | None | ERR13237766 | MDR-TB | lineage2.2.2 | None | ERR553168_ERR553169 | MDR-TB | lineage2.2.1 | None | SRR30180246 | MDR-TB | lineage2.2.1 | None | SRR067516 | MDR-TB | lineage2.2.1.1 | None | SRR25827350 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR13265753 | MDR-TB | lineage2.2.1 | None | SRR10397199 | Pre-XDR-TB | lineage2.2.1 | None | ERR9907678 | MDR-TB | lineage4.3.4.1 | None | ERR13266304 | MDR-TB | lineage2.2.1 | None | SRR6785501 | MDR-TB | lineage2.2.1 | None | ERR13265371 | MDR-TB | lineage2.2.1 | None | ERR13285751 | MDR-TB | lineage2.2.1 | None | ERR5865683 | Pre-XDR-TB | lineage2.2.1 | None | SRR6511610 | HR-TB | lineage2.2.1 | None | SRR14802011 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732150 | MDR-TB | lineage2.2.1 | None | ERR2510389 | Pre-XDR-TB | lineage3 | pk | ERR13290606 | MDR-TB | lineage2.2.1 | None | ERR11068893 | MDR-TB | lineage4.1.2.1 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR2510572 | Pre-XDR-TB | lineage3 | pk | ERR3335740 | Pre-XDR-TB | lineage3 | pk | ERR2510253 | RR-TB | lineage4.8 | pk | ERR1035361 | MDR-TB | lineage4.1.2.1 | br | ERR13265794 | MDR-TB | lineage2.2.1 | None | SRR10500317 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR29289188 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR13265435 | MDR-TB | lineage2.2.1 | None | ERR13267118 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266389 | MDR-TB | lineage2.2.1 | None | SRR29289187 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR14801819 | MDR-TB | lineage2.2.1 | None | ERR8665712 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265244 | MDR-TB | lineage2.2.1 | None | SRR29273967 | MDR-TB | lineage4.1.2.1 | None | ERR4797510 | Pre-XDR-TB | lineage2.2.1 | in | SRR1049656 | RR-TB | lineage4.8 | None | SRR10380023 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265216 | MDR-TB | lineage2.2.1 | None | ERR13265349 | MDR-TB | lineage2.2.1 | None | ERR4799734 | Pre-XDR-TB | lineage2.2.1 | in | ERR13284538 | MDR-TB | lineage2.2.1 | None | ERR4800089 | Pre-XDR-TB | lineage2.2.1 | in | SRR29093330 | Pre-XDR-TB | lineage2.2.1 | None | SRR29273995 | Pre-XDR-TB | lineage4.7 | None | ERR4800450 | Pre-XDR-TB | lineage2.2.1 | in | ERR7737830 | MDR-TB | lineage2.2.1 | None | SRR1003110 | RR-TB | lineage4.8 | None | ERR2041715 | MDR-TB | lineage2.2.1 | None | SRR25514970 | MDR-TB | lineage2.2.1 | None | ERR13266318 | MDR-TB | lineage2.2.1 | None | SRR29772535 | RR-TB | lineage3 | None | ERR4797537 | Pre-XDR-TB | lineage2.2.1 | in | ERR13265645 | MDR-TB | lineage2.2.1 | None | SRR29358142 | MDR-TB | lineage2.2.1 | None | ERR13260559 | MDR-TB | lineage4.1.2.1 | None | ERR4799058 | MDR-TB | lineage3.1.2 | in | SRR15014741 | MDR-TB | lineage1.1.2 | None | ERR13265723 | MDR-TB | lineage2.2.1 | None | SRR11662593 | MDR-TB | lineage2.2.1 | None | SRR28351617 | MDR-TB | lineage2.2.1 | None | SRR28351445 | Pre-XDR-TB | lineage3.1.2 | None | SRR7131008 | MDR-TB | lineage4.7 | None | ERR4872291 | MDR-TB | lineage4.2.1 | None | ERR5866470 | Other | lineage2.2.1 | None | ERR4798350 | Pre-XDR-TB | lineage2.2.1.2 | in | SRR12420439 | Other | lineage2.2.1 | None | ERR13265689 | MDR-TB | lineage2.2.1 | None | SRR26937114 | MDR-TB | lineage2.2.1 | None | SRR1577830 | MDR-TB | lineage2.2.1 | None | ERR1199130 | MDR-TB | lineage4.6.1.2 | None | ERR5865684 | Pre-XDR-TB | lineage2.2.1 | None | ERR552240 | MDR-TB | lineage2.2.1 | None | SRR8651614 | Pre-XDR-TB | lineage2.2.1 | cn | SRR10040178 | MDR-TB | lineage2.2.1 | None | SRR671779 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8651587 | Pre-XDR-TB | lineage2.2.1 | cn | SRR8651570 | Pre-XDR-TB | lineage2.2.1 | cn | SRR28498695 | HR-TB | lineage2.2.1 | None | SRR28044988 | MDR-TB | lineage4.2.2.2 | None | ERR3287735 | MDR-TB | lineage4 | pe | SRR25515559 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070362 | MDR-TB | lineage3 | None | SRR28351365 | Pre-XDR-TB | lineage2.2.1 | None | ERR1555046 | MDR-TB | lineage4.1.2 | None | ERR12796610 | Pre-XDR-TB | lineage2.2.1 | None | ERR4808876 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR28498685 | MDR-TB | lineage2.2.1 | None | SRR28646107 | MDR-TB | lineage4.7 | None | ERR4831254 | MDR-TB | lineage2.2.1 | de | ERR4831639 | MDR-TB | lineage2.2.1.1 | vn | SRR15316443 | Pre-XDR-TB | lineage2.2.1 | None | ERR3256219 | MDR-TB | lineage1.2.1.2.1 | ph | ERR11080935 | MDR-TB | lineage3.1.2.1 | None | ERR11043973 | MDR-TB | lineage2.2.1 | None | SRR24256203 | Pre-XDR-TB | lineage4.3.3 | None | ERR688049 | Pre-XDR-TB | lineage3 | None | SRR23311019 | HR-TB | lineage2.2.1 | None | ERR5866471 | Other | lineage2.2.1 | None | ERR11156387 | MDR-TB | lineage2.2.1;lineage4.3.4.1 | None | SRR10040325 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266315 | MDR-TB | lineage2.2.1 | None | SRR13232745 | MDR-TB | lineage2.2.1 | None | SRR29093382 | MDR-TB | lineage2.2.1 | None | SRR14334195 | Other | lineage2.2.1 | None | ERR13265440 | MDR-TB | lineage2.2.1 | None | ERR13275948 | MDR-TB | lineage2.2.1 | None | ERR13265605 | MDR-TB | lineage2.2.1 | None | ERR5865936 | MDR-TB | lineage2.2.1 | None | ERR13265302 | MDR-TB | lineage2.2.1 | None | SRR29055877 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265014 | MDR-TB | lineage2.2.1 | None | ERR13265919 | MDR-TB | lineage2.2.1 | None | SRR29772633 | MDR-TB | lineage3.1.2 | None | ERR13266025 | MDR-TB | lineage2.2.1 | None | ERR13265263 | MDR-TB | lineage2.2.1 | None | SRR14801973 | MDR-TB | lineage2.2.1 | None | SRR29017232 | MDR-TB | lineage2.2.1 | None | SRR1003111 | RR-TB | lineage4.8 | None | ERR5865947 | MDR-TB | lineage2.2.1 | None | ERR5865948 | MDR-TB | lineage2.2.1 | None | SRR29096566 | MDR-TB | lineage2.2.1 | None | ERR13232509 | Pre-XDR-TB | lineage2.2.1 | None | ERR13292578 | MDR-TB | lineage2.2.1 | None | ERR13260541 | MDR-TB | lineage4 | None | SRR25827543 | XDR-TB | lineage2.2.1;lineage3 | None | SAMN03246463 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13265901 | MDR-TB | lineage2.2.1 | None | SRR21277683 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316314 | MDR-TB | lineage2.2.1 | None | SRR25515436 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265416 | MDR-TB | lineage2.2.1 | None | ERR13265107 | MDR-TB | lineage2.2.1 | None | ERR4553800 | MDR-TB | lineage2.2.1 | None | ERR13264972 | MDR-TB | lineage2.2.1 | None | SRR1010998 | RR-TB | lineage4.8 | None | SRR16088553 | MDR-TB | lineage2.2.1 | None | SRR14782325 | MDR-TB | lineage2.2.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR1049657 | RR-TB | lineage4.8 | None | SRR29017233 | MDR-TB | lineage2.2.1 | None | ERR2041705 | MDR-TB | lineage2.2.1 | None | SRR23311008 | MDR-TB | lineage2.2.1 | None | ERR10748359 | MDR-TB | lineage2.2.1 | None | ERR13266653 | HR-TB | lineage2.2.1 | None | ERR13265938 | MDR-TB | lineage2.2.1 | None | SRR7516327 | MDR-TB | lineage2.2.1 | None | ERR5987307 | MDR-TB | lineage4.1.1.3 | None | ERR133972 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR13290772 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040295 | MDR-TB | lineage2.2.1.1 | None | SRR7755766 | Pre-XDR-TB | lineage2.2.1 | None | ERR13264987 | MDR-TB | lineage2.2.1 | None | ERR13266130 | XDR-TB | lineage2.2.1 | None | ERR13265305 | MDR-TB | lineage2.2.1 | None | ERR1035337 | MDR-TB | lineage4.1.2.1 | br | SRR23310927 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972346 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266912 | XDR-TB | lineage2.2.1 | None | ERR2041799 | MDR-TB | lineage2.2.1 | None | SRR10380021 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755691 | MDR-TB | lineage2.2.1 | None | ERR13265502 | MDR-TB | lineage2.2.1 | None | ERR13284276 | MDR-TB | lineage2.2.1 | None | SRR20969656 | MDR-TB | lineage2.2.1 | None | ERR7737648 | MDR-TB | lineage2.2.1 | None | ERR552240_ERR552238_ERR552239 | MDR-TB | lineage2.2.1 | None | ERR1035283 | MDR-TB | lineage4.3.3 | br | SRR29016947 | MDR-TB | lineage2.2.1 | None | SRR24256134 | MDR-TB | lineage2.2.1 | None | SRR11342635 | MDR-TB | lineage4.8 | None | SRR16370392 | MDR-TB | lineage2.2.1 | None | ERR13290801 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266671 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276243 | Pre-XDR-TB | lineage2.2.1 | None | SRR069943 | MDR-TB | lineage2.2.1.1 | None | SRR7516426 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285794 | MDR-TB | lineage2.2.1 | None | SRR14782486 | MDR-TB | lineage2.2.1 | None | SRR21887750 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772546 | MDR-TB | lineage1.1.2 | None | SRR29539820 | XDR-TB | lineage2.2.1 | None | ERR13265697 | MDR-TB | lineage2.2.1 | None | ERR13265195 | MDR-TB | lineage2.2.1 | None | SRR15368720 | MDR-TB | lineage2.2.1 | None | SRR29273975 | MDR-TB | lineage4.1.2.1 | None | SRR23310868 | XDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR25207295 | MDR-TB | lineage2.2.1 | None | SRR6831794 | MDR-TB | lineage2.2.1 | None | SRR12420370 | RR-TB | lineage2.2.1 | None | ERR13290874 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265791 | MDR-TB | lineage2.2.1;lineage4.8 | None | ERR7975646 | MDR-TB | lineage2.2.1 | None | SRR3743384 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276288 | MDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285807 | MDR-TB | lineage2.2.1 | None | ERR987775 | MDR-TB | lineage4.6.1.2 | None | ERR13260547 | MDR-TB | lineage4.1.2.1 | None | ERR13265438 | MDR-TB | lineage2.2.1 | None | ERR13266011 | MDR-TB | lineage2.2.1 | None | ERR13260080 | MDR-TB | lineage2.2.1 | None | ERR13265542 | MDR-TB | lineage2.2.1 | None | ERR13265980 | MDR-TB | lineage2.2.1 | None | SRR6256966 | MDR-TB | lineage2.2.1 | None | ERR13265226 | MDR-TB | lineage2.2.1 | None | ERR13265811 | MDR-TB | lineage2.2.1 | None | SRR29289345 | Pre-XDR-TB | lineage3 | None | ERR13266338 | MDR-TB | lineage2.2.1 | None | SRR13870402 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13265237 | MDR-TB | lineage2.2.1 | None | ERR1035333 | Pre-XDR-TB | lineage4.1.2.1 | br | ERR13249493 | MDR-TB | lineage4.5 | None | ERR4829964 | MDR-TB | lineage3.1.2.1 | pk | SRR21887661 | MDR-TB | lineage2.2.1 | None | SRR10500318 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR13266228 | MDR-TB | lineage2.2.1 | None | ERR4800064 | Pre-XDR-TB | lineage2.2.1 | in | ERR13265590 | MDR-TB | lineage2.2.1 | None | SRR023451 | RR-TB | lineage2.2.1 | None | ERR11043701 | MDR-TB | lineage2.2.1 | None | ERR13265866 | MDR-TB | lineage2.2.1 | None | SRR14782352 | MDR-TB | lineage2.2.1 | None | SRR10379945 | RR-TB | lineage4.8 | None | ERR10762367 | MDR-TB | lineage2.2.1 | None | ERR4798666 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796786 | MDR-TB | lineage2.2.1 | in | SRR25206934 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207278 | MDR-TB | lineage2.2.1 | None | ERR11798605 | MDR-TB | lineage2.2.1 | None | ERR688016 | Pre-XDR-TB | lineage3 | None | ERR13264998 | MDR-TB | lineage2.2.1 | None | SAMN02360629 | RR-TB | lineage4.8 | ug | SRR28046251 | MDR-TB | lineage3 | None | SAMN02360624 | RR-TB | lineage4.8 | ug | SAMN02360627 | RR-TB | lineage4.8 | ug | SAMN02381027 | Pre-XDR-TB | lineage2.2.1 | ug | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | ERR11043463 | MDR-TB | lineage4.1.2.1 | None | SRR11972190 | MDR-TB | lineage2.2.1 | None | ERR2041695 | MDR-TB | lineage2.2.1 | None | ERR4800618 | Pre-XDR-TB | lineage2.2.1 | None | SRR1168974 | MDR-TB | lineage2.2.1 | None | SRR25515558 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287453 | MDR-TB | lineage2.2.1 | pe | ERR7911112 | MDR-TB | lineage2.2.1 | vn | ERR7911287 | MDR-TB | lineage1.1.1.1 | vn | ERR7911291 | MDR-TB | lineage2.2.1.1 | vn | ERR4872334 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801351 | MDR-TB | lineage2.2.1 | None | ERR11081047 | Pre-XDR-TB | lineage4.1 | None | ERR11081191 | MDR-TB | lineage2.2.1 | None | ERR11081709 | MDR-TB | lineage2.2.1 | None | SRR25515464 | Pre-XDR-TB | lineage2.2.1 | None | ERR2041685 | MDR-TB | lineage2.2.1 | None | ERR553169 | MDR-TB | lineage2.2.1 | None | SRR14802266 | MDR-TB | lineage2.2.1 | None | SRR16370539 | MDR-TB | lineage2.2.1 | None | SRR23310879 | MDR-TB | lineage4.2.1 | None | SRR23311051 | Pre-XDR-TB | lineage2.2.1 | None | ERR137255 | MDR-TB | lineage2.2.1 | ru | ERR2516909 | MDR-TB | lineage4.1.2.1 | gb | ERR2516382 | MDR-TB | lineage2.2.1 | be | ERR2516536 | MDR-TB | lineage2.2.1 | nl | SRR5709781 | MDR-TB | lineage4.2.2 | th | SRR6824657 | MDR-TB | lineage2.2.1 | cn | SRR6824636 | Pre-XDR-TB | lineage2.2.1 | cn | ERR11081126 | MDR-TB | lineage2.2.1 | None | SRR28351661 | MDR-TB | lineage2.2.1 | None | SRR29273637 | MDR-TB | lineage4.1.2.1 | None | ERR13266271 | MDR-TB | lineage2.2.1 | None | ERR13265065 | MDR-TB | lineage2.2.1 | None | ERR13265898 | MDR-TB | lineage2.2.1 | None | ERR13266314 | MDR-TB | lineage2.2.1 | None | ERR13265180 | MDR-TB | lineage2.2.1 | None | ERR13266020 | MDR-TB | lineage2.2.1 | None | ERR4872097 | MDR-TB | lineage4.6.4 | None | SRR6256998 | RR-TB | lineage2.2.1 | None | ERR2653169 | MDR-TB | lineage4.3.4 | None | SRR23252672 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802157 | MDR-TB | lineage2.2.1 | None | ERR11798532 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865048 | MDR-TB | lineage2.2.1 | None | ERR13265777 | MDR-TB | lineage2.2.1 | None | ERR2041701 | MDR-TB | lineage4.7 | None | SRR28394114 | MDR-TB | lineage4.1.2.1 | None | SRR28498492 | MDR-TB | lineage2.2.1 | None | ERR9119484 | MDR-TB | lineage4.6.4 | None | ERR13265134 | MDR-TB | lineage2.2.1 | None | ERR13290607 | MDR-TB | lineage2.2.1 | None | SRR29093664 | Pre-XDR-TB | lineage2.2.1 | None | ERR13259989 | MDR-TB | lineage4.8 | None | ERR13265834 | MDR-TB | lineage2.2.1 | None | ERR13266218 | MDR-TB | lineage2.2.1 | None | ERR13266239 | MDR-TB | lineage2.2.1 | None | ERR13276316 | MDR-TB | lineage2.2.1 | None | SRR1723734 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02403500 | MDR-TB | lineage2.2.1 | za | SRR10305621 | RR-TB | lineage2.2.1 | None | SRR11662251 | MDR-TB | lineage2.2.1 | None | SRR1062917 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276287 | MDR-TB | lineage2.2.1 | None | ERR4829401 | MDR-TB | lineage4.1.2.1 | it | ERR7911334 | MDR-TB | lineage2.2.1 | vn | SRR11662362 | Pre-XDR-TB | lineage4.2.2 | None | ERR4828636 | MDR-TB | lineage2.2.1 | vn | SRR1162848 | MDR-TB | lineage2.2.1 | None | SRR28393417 | MDR-TB | lineage4.3.3 | None | ERR8975785 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10040153 | MDR-TB | lineage2.2.1 | None | SRR21276943 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910971 | MDR-TB | lineage2.2.1 | md | ERR2517115 | MDR-TB | lineage4.1.2.1 | gb | ERR2517073 | MDR-TB | lineage4.6.2.2 | gb | ERR2516599 | MDR-TB | lineage4 | pe | ERR2200148 | MDR-TB | lineage2.2.1 | rs | ERR2041706 | MDR-TB | lineage2.2.1 | rs | ERR2041752 | MDR-TB | lineage4.7 | rs | ERR2041735 | MDR-TB | lineage4.7 | rs | ERR2041800 | MDR-TB | lineage2.2.1 | rs | ERR2041691 | MDR-TB | lineage2.2.1 | rs | ERR2041704 | MDR-TB | lineage2.2.1 | rs | ERR2041743 | MDR-TB | lineage2.2.1 | rs | SRR5817469 | Pre-XDR-TB | lineage2.2.1 | au | SRR6824285 | MDR-TB | lineage2.2.1 | cn | SRR11972169 | HR-TB | lineage2.2.1 | None | SRR14801941 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044205 | MDR-TB | lineage2.2.1 | None | SRR20632820 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261893 | MDR-TB | lineage4 | None | ERR553168 | MDR-TB | lineage2.2.1 | None | ERR10762489 | MDR-TB | lineage2.2.1 | None | SRR1140681 | MDR-TB | lineage3.1.2.1;lineage4.3.4.2 | None | SRR6257089 | MDR-TB | lineage2.2.1 | ru | SRR25207284 | MDR-TB | lineage2.2.1 | None | ERR3794549 | MDR-TB | lineage2.2.1 | None | SRR6484978 | MDR-TB | lineage2.2.1 | None | SRR25206853 | MDR-TB | lineage2.2.1 | None | ERR12118014 | MDR-TB | lineage4.3.3 | None | ERR13265763 | MDR-TB | lineage2.2.1 | None | ERR13284576 | MDR-TB | lineage2.2.1 | None | ERR13265750 | MDR-TB | lineage2.2.1 | None | ERR13266179 | MDR-TB | lineage2.2.1 | None | ERR13276172 | MDR-TB | lineage2.2.1 | None | SRR28393620 | MDR-TB | lineage4 | None | ERR8665569 | MDR-TB | lineage2.2.1 | None | SRR7517719 | MDR-TB | lineage2.2.1 | ch | ERR13265375 | MDR-TB | lineage2.2.1 | None | ERR13265797 | MDR-TB | lineage2.2.1 | None | ERR13266229 | MDR-TB | lineage2.2.1 | None | ERR13265093 | MDR-TB | lineage2.2.1 | None | ERR13265503 | MDR-TB | lineage2.2.1 | None | SRR14802046 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645789 | MDR-TB | lineage2.2.1 | None | SRR25827883 | Pre-XDR-TB | lineage3;lineage4.2.2.2 | None | SRR5153218 | MDR-TB | lineage2.2.1 | None | SRR1165340 | MDR-TB | lineage2.2.1 | None | SRR16058701 | Pre-XDR-TB | lineage2.2.1 | None | SRR26937086 | RR-TB | lineage2.2.1 | None | SRR1049687 | Pre-XDR-TB | lineage2.2.1 | None | SRR10306029 | MDR-TB | lineage2.2.1 | None | SRR14782303 | HR-TB | lineage2.2.1 | None | ERR13265899 | MDR-TB | lineage2.2.1 | None | ERR13290609 | MDR-TB | lineage2.2.1 | None | SRR28393984 | MDR-TB | lineage4.3.3 | None | ERR2041703 | MDR-TB | lineage2.2.1 | None | ERR13265844 | MDR-TB | lineage2.2.1 | None | ERR13275898 | MDR-TB | lineage2.2.1 | None | ERR4800282 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800378 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798127 | Pre-XDR-TB | lineage2.2.1 | in | SRR22424930 | Pre-XDR-TB | lineage4.9 | None | SRR11567823 | Pre-XDR-TB | lineage2.2.1 | None | SRR8651559 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4872305 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02381024 | RR-TB | lineage4.8 | ug | SAMN02360631 | RR-TB | lineage4.8 | ug | SAMN02414972 | MDR-TB | lineage2.2.1 | se | ERR13232612 | MDR-TB | lineage2.2.1 | None | ERR13265536 | MDR-TB | lineage2.2.1 | None | ERR13276214 | MDR-TB | lineage2.2.1 | None | SRR8651655 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2653222 | MDR-TB | lineage4.3.3 | None | ERR8665713 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822283 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02584583 | MDR-TB | lineage2.2.1 | md | SRR8651593 | Pre-XDR-TB | lineage2.2.1 | cn | SRR671818 | MDR-TB | lineage2.2.1 | cn | SRR671866 | MDR-TB | lineage2.2.1 | cn | SRR15014672 | MDR-TB | lineage3 | None | SRR18715038 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351372 | Pre-XDR-TB | lineage2.2.1 | None | SRR28393595 | MDR-TB | lineage2.2.1 | None | ERR3287477 | MDR-TB | lineage4 | pe | SRR11662576 | MDR-TB | lineage4.2.2 | None | SRR28044356 | MDR-TB | lineage2.2.1 | None | ERR751555 | MDR-TB | lineage4.1.2.1 | pe | SRR25827489 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.2.1 | None | ERR552239 | MDR-TB | lineage2.2.1 | None | SRR1140694 | Pre-XDR-TB | lineage2.2.1 | None | ERR7910963 | MDR-TB | lineage2.2.1 | md | SRR28046241 | MDR-TB | lineage3 | None | ERR1034584 | Pre-XDR-TB | lineage3 | pk | ERR4811869 | MDR-TB | lineage4.1.2.1 | pe | ERR779916 | MDR-TB | lineage4.1.2.1 | pe | ERR4831104 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828957 | MDR-TB | lineage4.1.2.1 | None | ERR7911189 | MDR-TB | lineage4.8 | za | ERR4829049 | MDR-TB | lineage4.7 | it | SRR16088214 | MDR-TB | lineage2.2.1 | None | ERR4829729 | Pre-XDR-TB | lineage4.7 | it | SRR29681228 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR7911064 | MDR-TB | lineage2.2.1 | md | ERR7910897 | MDR-TB | lineage2.2.1 | md | ERR7911081 | MDR-TB | lineage2.2.1 | md | ERR4813173 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4830904 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR4553966 | MDR-TB | lineage2.2.1 | None | SRR1167245 | MDR-TB | lineage2.2.1 | None | SRR13180367 | MDR-TB | lineage2.2.1 | None | SRR14782265 | Pre-XDR-TB | lineage2.2.1 | None | ERR552047 | MDR-TB | lineage2.2.1 | uz | SAMEA2534455 | Pre-XDR-TB | lineage2.2.1 | uz | SAMEA2534507 | MDR-TB | lineage2.2.1 | uz | SAMEA2535185 | MDR-TB | lineage2.2.1 | uz | ERR13265807 | MDR-TB | lineage2.2.1 | None | ERR13265817 | MDR-TB | lineage2.2.1 | None | ERR13265609 | MDR-TB | lineage2.2.1 | None | ERR1034690 | MDR-TB | lineage3.1.2 | in | SRR1723735 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553989 | MDR-TB | lineage2.2.1 | None | ERR3639746 | MDR-TB | lineage2.2.1 | None | ERR2041716 | MDR-TB | lineage2.2.1 | None | SRR1173261 | MDR-TB | lineage2.2.1 | None | ERR3273140 | MDR-TB | lineage2.2.1 | None | ERR552165_ERR552164 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088585 | MDR-TB | lineage2.2.1 | None | SRR18002884 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120109 | MDR-TB | lineage4.1.1.3 | None | SRR7645960 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310855 | MDR-TB | lineage2.2.1 | None | SRR23861895 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743487 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276855 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737789 | MDR-TB | lineage1.1.1.1 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | ERR8665863 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865047 | MDR-TB | lineage2.2.1 | None | ERR8665568 | HR-TB | lineage2.2.1 | None | ERR4872324 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119503 | MDR-TB | lineage4.6.4 | None | SRR1003109 | RR-TB | lineage4.8 | None | SRR1140675 | RR-TB | lineage4.8 | None | ERR13265479 | MDR-TB | lineage2.2.1 | None | SRR25827380 | MDR-TB | lineage4.2.2.2 | None | SRR14781979 | MDR-TB | lineage2.2.1 | None | SRR14782645 | MDR-TB | lineage2.2.1 | None |
|---|
