lineage | Count |
---|---|
lineage2.2.1 | 70 |
lineage4.1.2.1 | 13 |
lineage3 | 6 |
lineage4.1.2 | 1 |
lineage4.6.1.2 | 1 |
lineage2.2 | 9 |
lineage4.2.1;lineage2.2.1 | 1 |
lineage4.2.1 | 2 |
lineage2.2.1.1 | 3 |
lineage4.3.3 | 4 |
lineage4.8 | 7 |
lineage3.1.2.1 | 1 |
lineage4.7 | 5 |
lineage3.1.2 | 2 |
lineage1.2.1.2.1 | 2 |
lineage4 | 3 |
lineage1.1.1.1 | 1 |
lineage2.2.1.2 | 1 |
lineage4.3.4.1 | 1 |
lineage1.1.1 | 1 |
lineage4.1.1.3 | 2 |
lineage4.6.2.2 | 1 |
lineage1.1.2 | 1 |
lineage4.2.2 | 1 |
spoligotype | Count |
---|---|
None | 139 |
ID | Drug resistance | Lineage | Country iso2 | ERR4831104 | Pre-XDR-TB | lineage2.2.1 | None | ERR751555 | MDR-TB | lineage4.1.2.1 | pe | ERR7911112 | MDR-TB | lineage2.2.1 | vn | SRR8651559 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2510245 | MDR-TB | lineage3 | pk | SAMEA2535185 | MDR-TB | lineage2.2.1 | uz | ERR1555046 | MDR-TB | lineage4.1.2 | None | ERR4828957 | MDR-TB | lineage4.1.2.1 | None | ERR1199130 | MDR-TB | lineage4.6.1.2 | None | ERR2864261 | HR-TB | lineage2.2.1 | None | SRR6824285 | MDR-TB | lineage2.2.1 | cn | ERR1035333 | Pre-XDR-TB | lineage4.1.2.1 | br | ERR7910897 | MDR-TB | lineage2.2.1 | md | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | ERR2041695 | MDR-TB | lineage2.2.1 | None | SRR671866 | MDR-TB | lineage2.2.1 | cn | ERR2041706 | MDR-TB | lineage2.2.1 | rs | ERR9634299 | MDR-TB | lineage2.2 | None | SRR15014687 | MDR-TB | lineage2.2 | None | SRR23310855 | MDR-TB | lineage2.2 | None | SRR23310837 | MDR-TB | lineage2.2 | None | SRR23310838 | MDR-TB | lineage2.2 | None | SRR23310868 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR23311008 | MDR-TB | lineage2.2 | None | SRR23310879 | MDR-TB | lineage4.2.1 | None | SRR23310927 | Pre-XDR-TB | lineage2.2 | None | SRR23311019 | Pre-XDR-TB | lineage2.2 | None | ERR2200148 | MDR-TB | lineage2.2.1 | rs | SRR23311051 | MDR-TB | lineage2.2 | None | ERR11003793 | MDR-TB | lineage4.2.1 | None | ERR2517115 | MDR-TB | lineage4.1.2.1 | gb | SRR1723841 | MDR-TB | lineage2.2.1 | cn | ERR7911064 | MDR-TB | lineage2.2.1 | md | ERR2516382 | MDR-TB | lineage2.2.1 | be | ERR4799734 | Pre-XDR-TB | lineage2.2.1 | in | SRR671818 | MDR-TB | lineage2.2.1 | cn | ERR4800064 | Pre-XDR-TB | lineage2.2.1 | in | ERR7911291 | MDR-TB | lineage2.2.1.1 | vn | ERR2041800 | MDR-TB | lineage2.2.1 | rs | ERR1035304 | MDR-TB | lineage4.3.3 | br | ERR4800089 | Pre-XDR-TB | lineage2.2.1 | in | ERR4831254 | MDR-TB | lineage2.2.1 | de | SAMN02381027 | Pre-XDR-TB | lineage2.2.1 | ug | SAMN02360627 | RR-TB | lineage4.8 | ug | SRR671779 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4798738 | XDR-TB | lineage2.2.1 | in | SAMN02360631 | RR-TB | lineage4.8 | ug | ERR4829964 | MDR-TB | lineage3.1.2.1 | pk | ERR4831639 | MDR-TB | lineage2.2.1.1 | vn | ERR2516909 | MDR-TB | lineage4.1.2.1 | gb | SRR8651593 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2041702 | MDR-TB | lineage4.7 | None | ERR1034690 | MDR-TB | lineage3.1.2 | in | SAMEA2534455 | Pre-XDR-TB | lineage2.2.1 | uz | SAMN02381024 | RR-TB | lineage4.8 | ug | ERR4800378 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797537 | Pre-XDR-TB | lineage2.2.1 | in | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | SAMN02360624 | RR-TB | lineage4.8 | ug | ERR4829729 | Pre-XDR-TB | lineage4.7 | it | ERR3256219 | MDR-TB | lineage1.2.1.2.1 | ph | ERR2510361 | Pre-XDR-TB | lineage2.2.1 | pk | ERR1034617 | Pre-XDR-TB | lineage3 | pk | ERR2516214 | MDR-TB | lineage2.2.1 | be | SAMN02584583 | MDR-TB | lineage2.2.1 | md | ERR1034584 | Pre-XDR-TB | lineage3 | pk | ERR2516599 | MDR-TB | lineage4 | pe | ERR4828636 | MDR-TB | lineage2.2.1 | vn | ERR4799635 | Pre-XDR-TB | lineage2.2.1 | in | ERR2041685 | MDR-TB | lineage2.2.1 | None | ERR5917761 | Pre-XDR-TB | lineage2.2.1 | by | ERR4796786 | MDR-TB | lineage2.2.1 | in | ERR4811869 | MDR-TB | lineage4.1.2.1 | pe | ERR552047 | MDR-TB | lineage2.2.1 | uz | ERR137255 | MDR-TB | lineage2.2.1 | ru | SAMEA2534507 | MDR-TB | lineage2.2.1 | uz | ERR4796836 | MDR-TB | lineage2.2.1 | in | ERR7910873 | MDR-TB | lineage4.3.3 | pe | ERR7910963 | MDR-TB | lineage2.2.1 | md | SAMN02403500 | MDR-TB | lineage2.2.1 | za | SAMN03246463 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3287477 | MDR-TB | lineage4 | pe | SRR6824657 | MDR-TB | lineage2.2.1 | cn | ERR7911287 | MDR-TB | lineage1.1.1.1 | vn | ERR4799058 | MDR-TB | lineage3.1.2 | in | ERR2041743 | MDR-TB | lineage2.2.1 | rs | SRR5710014 | Pre-XDR-TB | lineage2.2.1 | th | SRR7517719 | MDR-TB | lineage2.2.1 | ch | ERR4798350 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4829401 | MDR-TB | lineage4.1.2.1 | it | ERR2041704 | MDR-TB | lineage2.2.1 | rs | ERR1035298 | MDR-TB | lineage4.1.2.1 | br | ERR1034679 | MDR-TB | lineage4.3.3 | co | ERR1035361 | MDR-TB | lineage4.1.2.1 | br | SRR8651587 | Pre-XDR-TB | lineage2.2.1 | cn | ERR779916 | MDR-TB | lineage4.1.2.1 | pe | ERR2510253 | RR-TB | lineage4.8 | pk | ERR3335740 | Pre-XDR-TB | lineage3 | pk | ERR2041691 | MDR-TB | lineage2.2.1 | rs | SRR6824636 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1035337 | MDR-TB | lineage4.1.2.1 | br | ERR2041752 | MDR-TB | lineage4.7 | rs | ERR4798127 | Pre-XDR-TB | lineage2.2.1 | in | ERR1035283 | MDR-TB | lineage4.3.3 | br | ERR3256203 | MDR-TB | lineage4.3.4.1 | ph | ERR4800450 | Pre-XDR-TB | lineage2.2.1 | in | SAMN02360629 | RR-TB | lineage4.8 | ug | ERR3256220 | MDR-TB | lineage1.2.1.2.1 | ph | ERR7911081 | MDR-TB | lineage2.2.1 | md | SRR671727 | MDR-TB | lineage2.2.1 | cn | ERR4828390 | HR-TB | lineage1.1.1 | vn | ERR4800282 | Pre-XDR-TB | lineage2.2.1 | in | ERR7911334 | MDR-TB | lineage2.2.1 | vn | ERR4808876 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7910971 | MDR-TB | lineage2.2.1 | md | SRR5817469 | Pre-XDR-TB | lineage2.2.1 | au | SRR8651655 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1723808 | MDR-TB | lineage2.2.1 | cn | ERR2041735 | MDR-TB | lineage4.7 | rs | ERR3287453 | MDR-TB | lineage2.2.1 | pe | ERR2041716 | MDR-TB | lineage2.2.1 | None | SRR6257089 | MDR-TB | lineage2.2.1 | ru | SAMN02414972 | MDR-TB | lineage2.2.1 | se | ERR8975785 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4798666 | Pre-XDR-TB | lineage2.2.1 | in | ERR7911189 | MDR-TB | lineage4.8 | za | ERR2517073 | MDR-TB | lineage4.6.2.2 | gb | SRR8380876 | MDR-TB | lineage1.1.2 | in | ERR4829049 | MDR-TB | lineage4.7 | it | ERR2510572 | Pre-XDR-TB | lineage3 | pk | ERR4830904 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR3287735 | MDR-TB | lineage4 | pe | SRR5709781 | MDR-TB | lineage4.2.2 | th | ERR2516536 | MDR-TB | lineage2.2.1 | nl | ERR4797510 | Pre-XDR-TB | lineage2.2.1 | in | SRR8651614 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2510389 | Pre-XDR-TB | lineage3 | pk | SRR8651570 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4813173 | Pre-XDR-TB | lineage2.2.1 | pe |
---|