SRR1013544
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR8773878
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR8773880
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR8975766
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR1013554
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013553
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013543
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1013564
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1013563
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1013577
|
MDR-TB
|
lineage2.2
|
None
|
SRR1013622
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013578
|
MDR-TB
|
lineage2.2
|
None
|
SRR1013668
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013621
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1048843
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1013669
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013679
|
Pre-XDR-TB
|
lineage2.2
|
None
|
SRR1013680
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1048852
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR1048853
|
Pre-XDR-TB
|
lineage4;lineage2.2.2
|
None
|
SRR1048842
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1048863
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1048885
|
MDR-TB
|
|
None
|
SRR1048864
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1049006
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1048886
|
MDR-TB
|
lineage2.2
|
None
|
SRR1049063
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1049007
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1049075
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1049062
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1050529
|
Other
|
lineage4.9
|
None
|
SRR1049074
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1144749
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR10851637
|
Sensitive
|
lineage4.3.3
|
None
|
SRR1047984
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1144783
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1144813
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1144776
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1144807
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1144780
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1144790
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1165529
|
MDR-TB
|
lineage4.7
|
None
|
SRR1162802
|
MDR-TB
|
lineage4.7
|
None
|
SRR1165601
|
MDR-TB
|
lineage4.7
|
None
|
SRR1166868
|
MDR-TB
|
lineage4.7
|
None
|
SRR1173277
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR15014750
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR13180331
|
Pre-XDR-TB
|
lineage4.3.1
|
None
|
SRR15014747
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR15506898
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR15465759
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1792495
|
Other
|
La1.7.1
|
None
|
SRR1792089
|
Other
|
La1.8.1
|
None
|
SRR1792124
|
Other
|
La1.8.1
|
None
|
SRR1792486
|
Other
|
La1.7.1
|
None
|
SRR1792499
|
Other
|
La1.7.1
|
None
|
SRR15506909
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR15661592
|
MDR-TB
|
lineage4.8
|
None
|
SRR1791764
|
Other
|
La1.8.1
|
None
|
SRR1791838
|
Other
|
La1.8.1
|
None
|
SRR1791865
|
Other
|
La1.8.1
|
None
|
SRR1792506
|
Other
|
La1.8.1
|
None
|
SRR2100072
|
Other
|
La1.8.1
|
None
|
SRR2100069
|
Sensitive
|
lineage4.1.1
|
None
|
SRR2100070
|
Sensitive
|
lineage4.1.1
|
None
|
SRR2100074
|
Other
|
La1.8.1
|
None
|
SRR2100088
|
Sensitive
|
lineage3
|
None
|
SRR2100080
|
Sensitive
|
lineage3.1.2
|
None
|
SRR2100083
|
Sensitive
|
lineage3
|
None
|
SRR2100068
|
Sensitive
|
lineage3.1.1
|
None
|
SRR2100079
|
Sensitive
|
lineage3
|
None
|
SRR2100077
|
Sensitive
|
lineage3
|
None
|
SRR2100081
|
Sensitive
|
lineage3
|
None
|
SRR2100085
|
Sensitive
|
lineage3.1.2
|
None
|
SRR2100091
|
Sensitive
|
lineage3
|
None
|
SRR2100089
|
Sensitive
|
lineage3
|
None
|
SRR2100082
|
Sensitive
|
lineage3
|
None
|
SRR2100090
|
Sensitive
|
lineage3
|
None
|
SRR2100086
|
Other
|
lineage3.1.2
|
None
|
SRR21747030
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21576673
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21747019
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22175213
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11138653
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR22424757
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR11081227
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11138658
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR11138648
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR8025654
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR11138650
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4813828
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR10610203
|
RR-TB
|
|
None
|
ERR4813774
|
MDR-TB
|
lineage4.3.3
|
br
|
ERR233349
|
Other
|
lineage7
|
None
|
ERR233355
|
Sensitive
|
lineage7
|
None
|
ERR4813824
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813852
|
MDR-TB
|
lineage4.3.3
|
br
|
SRR2467265
|
Sensitive
|
lineage3
|
None
|
SRR2469368
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR4813858
|
MDR-TB
|
lineage4.3.3
|
br
|
SRR2469374
|
Sensitive
|
lineage4.8
|
None
|
ERR4813876
|
MDR-TB
|
lineage4.3.3
|
br
|
ERR4813860
|
MDR-TB
|
lineage4.3.3
|
br
|
ERR4813868
|
MDR-TB
|
lineage4.3.3
|
br
|
ERR4813874
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813872
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813883
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813884
|
MDR-TB
|
lineage4.3.3
|
br
|
ERR4813881
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813877
|
MDR-TB
|
lineage4.3.3
|
br
|
ERR4813900
|
MDR-TB
|
lineage4.3.3
|
br
|
ERR4813891
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813897
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813889
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813911
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR3085345
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3082103
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2041712
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR233348
|
Sensitive
|
lineage4.6.3
|
et
|
ERR4813953
|
MDR-TB
|
lineage4.3.3;lineage4.1.2.1
|
br
|
ERR4813969
|
MDR-TB
|
lineage4.3.3
|
br
|
SRR1723876
|
RR-TB
|
lineage2.2.1
|
None
|
ERR1200620
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR1679636
|
MDR-TB
|
lineage4.6.2.2
|
ng
|
ERR464774
|
Sensitive
|
lineage4.4.1.1
|
ch
|
ERR1200618
|
Sensitive
|
lineage7
|
None
|
SRR3105792
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR233363
|
Sensitive
|
lineage1.1.1
|
None
|
ERR233361
|
Sensitive
|
lineage2.2.1.1
|
None
|
SAMN02398704
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
ERR1193641
|
Sensitive
|
lineage4.3.3
|
et
|
ERR1200603
|
Sensitive
|
lineage7
|
None
|
ERR4813032
|
RR-TB
|
lineage4.1.1.3
|
pe
|
ERR233362
|
Sensitive
|
lineage6.1.1
|
sn
|
ERR1200639
|
Sensitive
|
lineage7
|
et
|
ERR233346
|
Sensitive
|
lineage7
|
None
|
SAMN02414953
|
MDR-TB
|
lineage4.7
|
se
|
ERR1200609
|
Sensitive
|
lineage3
|
et
|
ERR4816959
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02360556
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR841400
|
Other
|
lineage4.8
|
None
|
ERR1200637
|
Sensitive
|
lineage4.2.2.2
|
et
|
ERR841397
|
Sensitive
|
lineage4.8
|
rs
|
SAMN02398698
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
ERR233368
|
Sensitive
|
lineage6
|
None
|
ERR233367
|
Sensitive
|
lineage6.2.2;lineage4
|
None
|
ERR1200631
|
Sensitive
|
lineage7
|
et
|
SRR3743189
|
Other
|
lineage4.2.1
|
None
|
ERR2041791
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
SAMN02398693
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
SAMN02360613
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
ERR464771
|
Sensitive
|
lineage4.4.1.1
|
ch
|
ERR233369
|
Other
|
lineage4.8
|
et
|
SRR4019491
|
Other
|
La1.7.1
|
None
|
ERR1200613
|
Sensitive
|
lineage7
|
et
|
ERR1200629
|
Sensitive
|
lineage1.2.2.1
|
et
|
ERR2510599
|
MDR-TB
|
lineage4.8
|
None
|
ERR233353
|
Sensitive
|
lineage1.2.2.1
|
et
|
SAMN02398711
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
ERR245650
|
Sensitive
|
lineage4.9.1
|
mw
|
ERR233364
|
Other
|
lineage1.2.2.2
|
cn
|
SAMN02360591
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR1200612
|
Sensitive
|
lineage7
|
et
|
ERR245649
|
Other
|
lineage4.8
|
mw
|
ERR245646
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245658
|
Sensitive
|
lineage4.9.1
|
mw
|
ERR245648
|
Other
|
lineage1.1.3.2
|
mw
|
ERR245657
|
Sensitive
|
lineage1.1.3.2
|
mw
|
ERR245667
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245659
|
Other
|
lineage4.9.1
|
mw
|
ERR245662
|
Sensitive
|
lineage1.2.2.1
|
None
|
ERR245671
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245660
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR245668
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245663
|
Other
|
lineage2.2.1
|
mw
|
ERR245664
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245665
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245666
|
Sensitive
|
lineage4.3.4.2
|
mw
|
ERR245673
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245678
|
Other
|
lineage3
|
mw
|
ERR245676
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245682
|
Other
|
lineage3
|
mw
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
ERR245670
|
MDR-TB
|
lineage1.2.2.2
|
mw
|
ERR245672
|
Sensitive
|
lineage1.2.2.1
|
mw
|
ERR245687
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245681
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245684
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245677
|
Sensitive
|
lineage1.1.3.2
|
mw
|
ERR245683
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245708
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245688
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245690
|
Sensitive
|
lineage4.3.4.1
|
mw
|
ERR245686
|
Other
|
lineage4.3.4.2
|
mw
|
ERR245692
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR245691
|
Sensitive
|
lineage1.1.2
|
mw
|
ERR245700
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245701
|
Other
|
lineage4.8
|
mw
|
ERR245702
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245689
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245699
|
Sensitive
|
lineage1.1.2
|
mw
|
ERR245706
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245711
|
Other
|
lineage4.1.2
|
mw
|
ERR245705
|
Sensitive
|
lineage1.1.3.2
|
mw
|
ERR245707
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245710
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR245713
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245709
|
Other
|
lineage4.3.4.2.1
|
mw
|
ERR245712
|
Sensitive
|
lineage4.9.1
|
mw
|
ERR245726
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245714
|
Sensitive
|
lineage4.9.1
|
mw
|
ERR245715
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245719
|
Sensitive
|
lineage4.9.1
|
mw
|
ERR1200614
|
Sensitive
|
lineage4.6.3
|
et
|
ERR245721
|
Sensitive
|
lineage1.1.3.2
|
mw
|
ERR245717
|
Sensitive
|
lineage1.1.3.2
|
mw
|
ERR245718
|
HR-TB
|
lineage4.3.4.2.1
|
mw
|
ERR245724
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245720
|
Sensitive
|
lineage1.1.3.2
|
mw
|
ERR245731
|
Sensitive
|
lineage4.9.1
|
mw
|
ERR245729
|
Other
|
lineage4.3.4.2.1
|
mw
|
ERR245727
|
Sensitive
|
lineage1.2.2.1
|
mw
|
ERR245735
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR245732
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245734
|
Sensitive
|
lineage1.1.3.2
|
mw
|
ERR245728
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR245730
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR4818870
|
Sensitive
|
lineage3
|
None
|
ERR245738
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245736
|
Sensitive
|
lineage4.9
|
mw
|
ERR245737
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245741
|
MDR-TB
|
lineage4.3.4.2.1
|
mw
|
ERR245744
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245755
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245750
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245751
|
Sensitive
|
lineage1.2.2.1
|
mw
|
ERR245752
|
Other
|
lineage4.3.4.2.1
|
mw
|
ERR245749
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245759
|
HR-TB
|
lineage4.1.2.1
|
mw
|
ERR245761
|
Sensitive
|
lineage1.1.3.2
|
mw
|
ERR245774
|
HR-TB
|
lineage4.1.2.1
|
mw
|
ERR245767
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245765
|
Sensitive
|
lineage4.3.4.1
|
mw
|
ERR245773
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR245783
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR245768
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245784
|
Sensitive
|
lineage1.1.3.2
|
mw
|
ERR245790
|
Sensitive
|
|
None
|
ERR245775
|
Sensitive
|
lineage1.1.3.2
|
mw
|
ERR245781
|
Sensitive
|
lineage1.1.3.2
|
mw
|
ERR245795
|
Sensitive
|
lineage4.3.2.1;lineage3.1.1
|
None
|
ERR245796
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245806
|
Sensitive
|
lineage4.8
|
mw
|
ERR245803
|
Sensitive
|
lineage3.1.1
|
mw
|
ERR245825
|
Sensitive
|
lineage1.1.3
|
None
|
ERR245816
|
Sensitive
|
lineage4.1.2
|
None
|
ERR245817
|
Sensitive
|
lineage1.1.3.2
|
None
|
ERR245819
|
Other
|
lineage3.1.1
|
None
|
ERR245824
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR245823
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR245831
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR1200638
|
Sensitive
|
lineage3
|
et
|
ERR245832
|
HR-TB
|
lineage3.1.1
|
mw
|
ERR245847
|
Sensitive
|
lineage4.9.1
|
mw
|
ERR245837
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR245846
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2041796
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR2041738
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR464772
|
Sensitive
|
lineage4.4.1.1
|
ch
|
ERR1200608
|
Sensitive
|
lineage7
|
et
|
ERR1200636
|
Other
|
lineage7
|
et
|
ERR233360
|
Sensitive
|
lineage3
|
None
|
ERR233358
|
RR-TB
|
lineage4.1.2.1
|
mx
|
ERR1200602
|
Sensitive
|
lineage7
|
et
|
ERR2516466
|
RR-TB
|
lineage3.1.1
|
nl
|
ERR1200615
|
Sensitive
|
lineage4.8
|
et
|
ERR233359
|
Sensitive
|
lineage2.2.2
|
kr
|
SAMN02398713
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
SRR5153605
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2516714
|
MDR-TB
|
lineage4.1.3
|
nl
|
ERR233351
|
Sensitive
|
lineage1.1.2
|
et
|
ERR4819542
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR841406
|
Other
|
lineage4.1.2
|
ch
|
ERR2516680
|
MDR-TB
|
lineage4.1.2
|
nl
|
ERR2041785
|
Pre-XDR-TB
|
lineage4.2.2.1
|
rs
|
ERR2516617
|
MDR-TB
|
lineage3
|
None
|
ERR1200634
|
Sensitive
|
lineage7
|
et
|
ERR464782
|
Sensitive
|
lineage4.4.1.1
|
ch
|
ERR1200604
|
Sensitive
|
lineage7
|
et
|
ERR1200607
|
HR-TB
|
lineage3
|
et
|
ERR233350
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR1200616
|
Sensitive
|
lineage4.1.2.1
|
et
|
ERR1200610
|
Sensitive
|
lineage7
|
et
|
ERR1200622
|
Other
|
La1.3
|
et
|
ERR233366
|
Sensitive
|
lineage6
|
None
|
ERR1200623
|
Sensitive
|
lineage7
|
et
|
SAMN02398696
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
ERR2179644
|
RR-TB
|
lineage4.4.2
|
cn
|
ERR1200624
|
Sensitive
|
lineage7
|
et
|
ERR2653075
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR1200627
|
Sensitive
|
lineage4.3.3
|
et
|
SRR1723976
|
RR-TB
|
lineage4.4.2
|
cn
|
ERR2041734
|
MDR-TB
|
lineage4.2.2.1
|
rs
|
ERR2653107
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2653187
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2653146
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2653211
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1200617
|
Other
|
lineage7
|
et
|
ERR233370
|
Other
|
lineage2.2.1
|
None
|
ERR1199051
|
Sensitive
|
lineage4.6.1.2
|
ug
|
ERR1200632
|
Sensitive
|
lineage1.1.3.1
|
et
|
ERR233365
|
Sensitive
|
lineage1.1.1.1
|
vn
|
ERR4827912
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827958
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4822360
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5817465
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR4830910
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
SAMN02360619
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
ERR1200626
|
Sensitive
|
lineage1.1.2
|
et
|
SRR6785441
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6356926
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6356941
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1200640
|
Sensitive
|
lineage7
|
et
|
ERR233357
|
Other
|
lineage2.2.1
|
None
|
ERR1200611
|
Other
|
lineage4.6.3
|
et
|
ERR1200619
|
Sensitive
|
lineage7
|
et
|
ERR4830962
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
SAMN02360561
|
MDR-TB
|
lineage2.2.2
|
kr
|
SRR6824347
|
RR-TB
|
lineage4.4.2
|
cn
|
SAMN03647262
|
Sensitive
|
lineage3
|
None
|
SAMN02398712
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
ERR1200621
|
Sensitive
|
lineage4.6
|
et
|
SRR6981998
|
Sensitive
|
lineage4.8.1;lineage4.4.1.1
|
None
|
ERR1200633
|
Sensitive
|
lineage7
|
et
|
ERR233347
|
Sensitive
|
lineage3
|
None
|
ERR502959
|
RR-TB
|
lineage4.4.2
|
None
|
ERR025841
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR8351921
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SAMN02360551
|
Pre-XDR-TB
|
lineage2.2.2
|
kr
|
DRR130162
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR036211
|
Other
|
lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2
|
None
|
ERR036198
|
Other
|
lineage4.3.4.2
|
None
|
ERR040090
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR036215
|
Other
|
lineage4.8
|
None
|
ERR037525
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR037551
|
Sensitive
|
lineage2.2.1
|
mw
|
ERR038270
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR038292
|
Sensitive
|
lineage4.2.2
|
gb
|
ERR039330
|
Sensitive
|
lineage4.3.4.2.1
|
gb
|
ERR036237
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR037545
|
Sensitive
|
lineage4.3.4.2.1
|
mw
|
ERR038271
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR040088
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR040105
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR040096
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR040102
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR040106
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR040121
|
MDR-TB
|
lineage1.1.2
|
ug
|
ERR040109
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR040118
|
MDR-TB
|
lineage3
|
ug
|
ERR040113
|
Sensitive
|
lineage4.3.4.2.1
|
ug
|
ERR040095
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR040092
|
Sensitive
|
lineage3.1.1
|
None
|
ERR040103
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR040099
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR040101
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR040108
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR040116
|
Other
|
lineage4.3.4.2.1
|
ug
|
ERR040117
|
Sensitive
|
lineage4.3.4.2.1
|
ug
|
ERR040119
|
HR-TB
|
lineage3.1.2.1
|
ug
|
ERR040127
|
MDR-TB
|
lineage4.6.1.2
|
ug
|
ERR040122
|
MDR-TB
|
lineage4.8
|
ug
|
ERR040128
|
MDR-TB
|
lineage4.4.1.1
|
ug
|
ERR040123
|
MDR-TB
|
lineage3.1.2.1
|
ug
|
ERR040120
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
ERR040125
|
MDR-TB
|
lineage4.6.1.2
|
ug
|
ERR040130
|
MDR-TB
|
lineage4.4.1.1
|
ug
|
ERR040124
|
MDR-TB
|
lineage4.4.1.1
|
ug
|
ERR040134
|
MDR-TB
|
lineage4.3.4.2.1
|
ug
|
ERR046732
|
Sensitive
|
lineage4.3.4.2.1
|
gb
|
ERR040139
|
MDR-TB
|
lineage3
|
ug
|
ERR040138
|
MDR-TB
|
lineage4.9
|
ug
|
ERR040140
|
Pre-XDR-TB
|
lineage3
|
ug
|
ERR046743
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046731
|
Sensitive
|
lineage4.1.1
|
None
|
ERR046729
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046730
|
HR-TB
|
lineage3.1.2.2
|
gb
|
ERR046740
|
Sensitive
|
lineage4.1.1
|
None
|
ERR046736
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046733
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046750
|
Other
|
La1.8.1
|
None
|
ERR046738
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046745
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046746
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046747
|
Other
|
La1.8.1
|
gb
|
ERR046734
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046744
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046752
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046758
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046749
|
Other
|
La1.8.1
|
gb
|
ERR046755
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046754
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046751
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046753
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046767
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046763
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046764
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046760
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046759
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046762
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046765
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046768
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046770
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046773
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046772
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046774
|
Other
|
La1.8.1
|
None
|
ERR046769
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046776
|
Sensitive
|
lineage4.8.1
|
gb
|
ERR046775
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046783
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046778
|
HR-TB
|
lineage4.8.1
|
gb
|
ERR046789
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046786
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046782
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046785
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046788
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046790
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046793
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046796
|
Pre-XDR-TB
|
lineage4.8
|
gb
|
ERR046799
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046812
|
Sensitive
|
lineage3
|
None
|
ERR046777
|
HR-TB
|
lineage4.8.1
|
gb
|
ERR046792
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046787
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046798
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046794
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046795
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046800
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046810
|
Sensitive
|
lineage3.1.2
|
None
|
ERR046803
|
Sensitive
|
lineage3
|
None
|
ERR046791
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046807
|
Sensitive
|
lineage3
|
None
|
ERR046809
|
Sensitive
|
lineage3
|
None
|
ERR046805
|
Sensitive
|
lineage3
|
None
|
ERR046806
|
Sensitive
|
lineage3
|
None
|
ERR046820
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046811
|
Sensitive
|
lineage3
|
None
|
ERR046816
|
Other
|
lineage3.1.2
|
None
|
ERR046813
|
Sensitive
|
lineage3
|
None
|
ERR046823
|
Sensitive
|
lineage1.2.2.2
|
gb
|
ERR046822
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046828
|
Sensitive
|
lineage3
|
None
|
ERR046819
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046815
|
Sensitive
|
lineage3.1.2
|
None
|
ERR046834
|
HR-TB
|
lineage4.6.2.2
|
gb
|
ERR046824
|
Sensitive
|
lineage1.2.2.2
|
gb
|
ERR046826
|
Sensitive
|
lineage3
|
None
|
ERR046825
|
RR-TB
|
lineage4.1.1
|
gb
|
ERR046836
|
Sensitive
|
lineage4.3.4.2.1
|
gb
|
ERR046830
|
Sensitive
|
lineage3.1.2
|
None
|
ERR046832
|
Sensitive
|
lineage1.1.2
|
gb
|
ERR046839
|
Sensitive
|
lineage4.6.2.1
|
gb
|
ERR046829
|
Sensitive
|
lineage3
|
None
|
ERR046827
|
Sensitive
|
lineage3
|
None
|
ERR046838
|
Sensitive
|
lineage4.6.2.1
|
gb
|
ERR046835
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR046831
|
Sensitive
|
lineage4.8
|
gb
|
ERR046833
|
Sensitive
|
lineage4.8
|
gb
|
ERR046843
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046844
|
Other
|
lineage1.2.2.1
|
gb
|
ERR046841
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046851
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046846
|
Sensitive
|
lineage3
|
gb
|
ERR046849
|
Sensitive
|
lineage1.1.2
|
gb
|
ERR046847
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046857
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046854
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046850
|
Sensitive
|
lineage1.2.2.2
|
gb
|
ERR046853
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046858
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046860
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046859
|
Sensitive
|
lineage4.1.1.3
|
gb
|
ERR046862
|
Sensitive
|
lineage3
|
gb
|
ERR046867
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046865
|
Sensitive
|
lineage4.1.4
|
gb
|
ERR046871
|
Sensitive
|
lineage4.3.4.2.1
|
gb
|
ERR046864
|
Sensitive
|
lineage4.1.4
|
gb
|
ERR046876
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046872
|
Sensitive
|
lineage4.1.2.1
|
gb
|
ERR046866
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046868
|
Sensitive
|
lineage4.1.1.3
|
gb
|
ERR046873
|
Sensitive
|
lineage4.1.2.1
|
gb
|
ERR046869
|
Sensitive
|
lineage4.1.1.3
|
gb
|
ERR046874
|
Sensitive
|
lineage4.1.2.1
|
gb
|
ERR046883
|
Sensitive
|
lineage3
|
gb
|
ERR046884
|
Sensitive
|
lineage4.3.4.2.1
|
gb
|
ERR046878
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046875
|
Sensitive
|
lineage4.1.2.1
|
gb
|
ERR046885
|
Sensitive
|
lineage4.3.4.2.1
|
gb
|
ERR046879
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046870
|
Sensitive
|
lineage4.3.4.2.1
|
gb
|
ERR046877
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046880
|
Sensitive
|
lineage1.2.2.2
|
gb
|
ERR046886
|
Sensitive
|
lineage1.2.2.1
|
None
|
ERR046892
|
Sensitive
|
lineage4.4.2
|
gb
|
ERR046881
|
Sensitive
|
lineage1.2.2.2
|
gb
|
ERR046889
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046888
|
Sensitive
|
lineage4.8
|
gb
|
ERR046890
|
Sensitive
|
lineage4.8
|
gb
|
ERR046893
|
Other
|
lineage1.2.2.1
|
gb
|
ERR046897
|
Sensitive
|
lineage4.4.1.1
|
gb
|
ERR046891
|
Sensitive
|
lineage1.1.2
|
gb
|
ERR046894
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR046896
|
Sensitive
|
lineage1.1.2
|
None
|
ERR046899
|
Sensitive
|
lineage4.8
|
None
|
ERR046898
|
Sensitive
|
lineage1.2.2.1
|
gb
|
ERR046895
|
Sensitive
|
lineage3
|
gb
|
ERR046903
|
Pre-XDR-TB
|
lineage4.8
|
gb
|
ERR046901
|
Sensitive
|
lineage4.4.1.1
|
gb
|
ERR046905
|
Sensitive
|
lineage1.1.2
|
gb
|
ERR046902
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR046913
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046904
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046907
|
Sensitive
|
lineage1.1.2
|
gb
|
ERR046917
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046915
|
Sensitive
|
lineage1.1.2
|
gb
|
ERR046906
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046910
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046908
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046914
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046920
|
Sensitive
|
lineage4.8.2
|
gb
|
ERR046912
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046929
|
Sensitive
|
lineage4.8
|
gb
|
ERR046919
|
Sensitive
|
lineage4.1.1.3.1
|
gb
|
ERR046916
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046911
|
Pre-XDR-TB
|
lineage4.1.1.3.1
|
gb
|
ERR046924
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046944
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR046954
|
Other
|
La1.8.1
|
gb
|
ERR046938
|
Sensitive
|
lineage2.2.1
|
gb
|
ERR046950
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046968
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046965
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR046959
|
Sensitive
|
lineage4.1.2.1
|
gb
|
ERR046971
|
Sensitive
|
lineage4.1.1
|
gb
|
ERR046990
|
Sensitive
|
lineage4.1.2.1
|
gb
|
ERR046967
|
Sensitive
|
lineage2.2.1
|
gb
|
ERR046969
|
Sensitive
|
lineage3.1.1
|
gb
|
ERR047007
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR047001
|
HR-TB
|
lineage1.1.2
|
gb
|
ERR046996
|
Sensitive
|
lineage4.6.2.2
|
gb
|
ERR047005
|
Sensitive
|
lineage4.8.1
|
gb
|
ERR047010
|
Sensitive
|
lineage4.3.1.1
|
gb
|
ERR3273101
|
RR-TB
|
lineage4.5
|
None
|
ERR10225494
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR1034785
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR10762235
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1367680
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR3287842
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR4796398
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR3287845
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
ERR3287841
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR4798155
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4796449
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4796509
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4796613
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797471
|
Pre-XDR-TB
|
lineage4.9
|
in
|
ERR4797611
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797898
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4797975
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4798274
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4798295
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798816
|
Pre-XDR-TB
|
lineage4.9;lineage4.1.1.3;lineage3;lineage2.2.1
|
in
|
ERR4798428
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799231
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798997
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4799658
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799519
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4799352
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799516
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799743
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4809257
|
MDR-TB
|
lineage2.2.2;lineage2.2.1.1
|
za
|
ERR4799862
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799999
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR4800081
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4800245
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR4800497
|
Pre-XDR-TB
|
lineage2.2.1
|
in
|
ERR4812243
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4810628
|
MDR-TB
|
lineage4.4.2
|
cn
|
ERR757159
|
MDR-TB
|
lineage4.1.2.1.1
|
ar
|
ERR6879041
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR776661
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR7975671
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7910872
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR7912726
|
MDR-TB
|
lineage4.1.2.1
|
pe
|