Rv0668 - p.Phe452Leu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
15 RR-TB
1 HR-TB
90 MDR-TB
128 Pre-XDR-TB
11 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 46 |
| lineage2.2.1 | 72 |
| lineage4.7 | 9 |
| lineage2.2.1.1 | 31 |
| lineage4.2.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.4.2 | 6 |
| lineage4.5 | 3 |
| lineage4.3.3 | 31 |
| lineage3 | 3 |
| lineage2.2.1.1;lineage3 | 2 |
| lineage4.1.2.1 | 13 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.1.2.1;lineage4.3 | 1 |
| lineage4.8 | 2 |
| lineage4.2.2.1 | 8 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.2.2 | 1 |
| lineage2.2.1;lineage3;lineage4.1.1.3;lineage4.9 | 1 |
| lineage2.2.1.1;lineage2.2.2 | 1 |
| lineage4.9 | 1 |
| lineage2.2.1;lineage4.4.2 | 1 |
| lineage4 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.1.2.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 245 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1013622 | Pre-XDR-TB | lineage2.2.2 | None | SRR3082103 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165529 | MDR-TB | lineage4.7 | None | SRR1048843 | Pre-XDR-TB | lineage2.2.2 | None | ERR4798997 | Pre-XDR-TB | lineage2.2.1 | None | ERR10225494 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR15014747 | MDR-TB | lineage4.2.2.2 | None | SRR22137418 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175213 | Pre-XDR-TB | lineage2.2.1 | None | ERR776661 | MDR-TB | lineage4.3.2 | None | SRR1723976 | RR-TB | lineage4.4.2 | cn | SRR21747030 | MDR-TB | lineage2.2.1 | None | SRR29093724 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137433 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290875 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1048842 | Pre-XDR-TB | lineage2.2.2 | None | SRR11662465 | MDR-TB | lineage4.5 | None | SRR22137402 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274779 | RR-TB | lineage4.3.3 | None | ERR13266119 | Pre-XDR-TB | lineage2.2.1 | None | SRR27107265 | Pre-XDR-TB | lineage4.3.3 | None | ERR13266079 | Pre-XDR-TB | lineage2.2.1 | None | SRR15465759 | MDR-TB | lineage2.2.1 | None | ERR13266691 | Pre-XDR-TB | lineage2.2.1 | None | ERR11138658 | Pre-XDR-TB | lineage2.2.2 | None | SRR25206987 | RR-TB | lineage2.2.1.1 | None | SRR29772818 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13266757 | Pre-XDR-TB | lineage3 | None | SRR30180347 | XDR-TB | lineage2.2.1 | None | SRR25827812 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | SRR28393755 | MDR-TB | lineage4.1.2.1 | None | SRR1013554 | MDR-TB | lineage2.2.2;lineage4 | None | ERR8773880 | RR-TB | lineage4.1.2.1 | None | ERR13290807 | XDR-TB | lineage2.2.1 | None | SRR29681318 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653075 | Pre-XDR-TB | lineage4.3.3 | None | SRR1013679 | Pre-XDR-TB | lineage2.2.2 | None | SRR25827423 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25827869 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1723876 | RR-TB | lineage2.2.1 | None | SRR22137419 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827958 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799743 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR8773878 | RR-TB | lineage4.1.2.1 | None | ERR4799516 | MDR-TB | lineage2.2.1.1 | in | ERR4799519 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798155 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796398 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796613 | Pre-XDR-TB | lineage2.2.1 | in | SAMN02360561 | MDR-TB | lineage2.2.2 | kr | SRR1049075 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360619 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02398696 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02398711 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02398704 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02398712 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02398713 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360613 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02414953 | MDR-TB | lineage4.7 | se | ERR4810628 | MDR-TB | lineage4.4.2 | cn | ERR4813969 | MDR-TB | lineage4.3.3 | br | ERR4813953 | RR-TB | lineage4.1.2.1;lineage4.3 | br | ERR3287842 | MDR-TB | lineage4.1.2.1 | pe | SRR28706536 | MDR-TB | lineage2.2.1 | None | ERR7912726 | MDR-TB | lineage4.1.2.1 | pe | ERR2653107 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813868 | MDR-TB | lineage4.3.3 | br | ERR4813874 | MDR-TB | lineage4.3.3 | None | ERR4813876 | MDR-TB | lineage4.3.3 | br | ERR4813877 | MDR-TB | lineage4.3.3 | br | ERR7975671 | MDR-TB | lineage2.2.1 | None | ERR2510599 | MDR-TB | lineage4.8 | None | SRR1013621 | Pre-XDR-TB | lineage2.2.2 | None | ERR2041785 | Pre-XDR-TB | lineage4.2.2.1 | rs | ERR2041734 | MDR-TB | lineage4.2.2.1 | rs | ERR2041738 | MDR-TB | lineage4.2.2.1 | rs | ERR2041791 | MDR-TB | lineage4.2.2.1 | rs | ERR2041712 | MDR-TB | lineage4.2.2.1 | rs | ERR2041796 | MDR-TB | lineage4.2.2.1 | rs | SRR6824347 | RR-TB | lineage4.4.2 | cn | SRR1144780 | Pre-XDR-TB | lineage2.2.2 | None | SRR15506898 | MDR-TB | lineage2.2.1 | None | SRR10040334 | MDR-TB | lineage2.2.1 | None | SRR1166868 | MDR-TB | lineage4.7 | None | SRR6785441 | MDR-TB | lineage2.2.1 | None | ERR13260068 | MDR-TB | lineage4.1.2.1 | None | SRR28045563 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13290553 | MDR-TB | lineage4.7 | None | ERR2653211 | MDR-TB | lineage4.3.3 | None | SRR1144813 | Pre-XDR-TB | lineage2.2.2 | None | ERR4813828 | XDR-TB | lineage4.3.3 | None | SRR8351921 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266394 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165601 | MDR-TB | lineage4.7 | None | SRR1013544 | Pre-XDR-TB | lineage2.2.2 | None | ERR3287841 | MDR-TB | lineage4.1.2.1 | pe | ERR3287845 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR1144807 | Pre-XDR-TB | lineage2.2.2 | None | ERR2179644 | RR-TB | lineage4.4.2 | cn | ERR13266696 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274738 | RR-TB | lineage4.3.3 | None | SRR25207107 | MDR-TB | lineage4.4.2 | None | SRR25207264 | Pre-XDR-TB | lineage2.2.1 | None | DRR130162 | MDR-TB | lineage2.2.1 | None | SRR1013563 | MDR-TB | lineage2.2.2 | None | SRR29093938 | Pre-XDR-TB | lineage2.2.2 | None | ERR11081227 | MDR-TB | lineage2.2.1 | None | ERR13266659 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813824 | Pre-XDR-TB | lineage4.3.3 | None | SRR3085345 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285722 | MDR-TB | lineage2.2.1 | None | ERR11138653 | Pre-XDR-TB | lineage2.2.2 | None | SRR21576673 | XDR-TB | lineage2.2.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SRR25827503 | Pre-XDR-TB | lineage2.2.1 | None | SRR12062500 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827780 | XDR-TB | lineage2.2.1;lineage4.8 | None | ERR3273101 | RR-TB | lineage4.5 | None | ERR13262066 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816959 | MDR-TB | lineage2.2.1 | None | SRR5817465 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR2653187 | Pre-XDR-TB | lineage4.3.3 | None | SRR1162802 | MDR-TB | lineage4.7 | None | SRR1144790 | Pre-XDR-TB | lineage2.2.2 | None | SRR26937101 | MDR-TB | lineage4.2.2 | None | ERR4796449 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796509 | Pre-XDR-TB | lineage2.2.1 | in | ERR2653146 | Pre-XDR-TB | lineage4.3.3 | None | ERR4798274 | Pre-XDR-TB | lineage2.2.1 | in | SRR1013564 | MDR-TB | lineage2.2.2 | None | ERR4798428 | MDR-TB | lineage2.2.1.1 | in | ERR4797611 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799862 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799999 | MDR-TB | lineage2.2.1.1 | in | SRR22137428 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800497 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798816 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4.1.1.3;lineage4.9 | in | ERR4799231 | HR-TB | lineage2.2.1.1 | in | ERR4799352 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR25827674 | XDR-TB | lineage2.2.1.1;lineage3 | None | SRR1047984 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02398698 | Pre-XDR-TB | lineage2.2.2 | kr | SRR28044467 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1048863 | MDR-TB | lineage2.2.2 | None | SRR1049074 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360551 | Pre-XDR-TB | lineage2.2.2 | kr | ERR13193998 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013680 | Pre-XDR-TB | lineage2.2.2 | None | SRR28046072 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4809257 | MDR-TB | lineage2.2.1.1;lineage2.2.2 | za | ERR4797471 | Pre-XDR-TB | lineage4.9 | in | ERR4813774 | MDR-TB | lineage4.3.3 | br | ERR4813889 | MDR-TB | lineage4.3.3 | None | ERR4813911 | MDR-TB | lineage4.3.3 | None | SRR22137478 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975766 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR15014750 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1048864 | MDR-TB | lineage2.2.2 | None | ERR1034785 | MDR-TB | lineage4.1.2.1 | pe | ERR4827912 | MDR-TB | lineage2.2.1 | None | SRR5153605 | Pre-XDR-TB | lineage2.2.1 | None | SRR15661592 | MDR-TB | lineage4.8 | None | SRR22137435 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290551 | MDR-TB | lineage4.7 | None | SRR22424757 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR22137468 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827645 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR15506909 | MDR-TB | lineage2.2.1 | None | SRR1049062 | Pre-XDR-TB | lineage2.2.2 | None | ERR4822360 | MDR-TB | lineage2.2.1 | None | SRR12062499 | Pre-XDR-TB | lineage2.2.1;lineage4.4.2 | None | SRR6356941 | MDR-TB | lineage2.2.1 | None | SRR1144776 | Pre-XDR-TB | lineage2.2.2 | None | SRR28706549 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144783 | Pre-XDR-TB | lineage2.2.2 | None | SRR29274063 | MDR-TB | lineage4 | None | SRR1144749 | Pre-XDR-TB | lineage2.2.2 | None | SRR29681277 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013553 | MDR-TB | lineage2.2.2 | None | ERR11082695 | MDR-TB | lineage4.3.3 | None | ERR11138648 | Pre-XDR-TB | lineage2.2.2 | None | ERR2041790 | MDR-TB | lineage4.2.2.1 | None | ERR13290710 | XDR-TB | lineage2.2.1 | None | ERR12118059 | MDR-TB | lineage4.1.2.1 | None | SRR6356926 | MDR-TB | lineage2.2.1 | None | ERR13276413 | MDR-TB | lineage2.2.1 | None | SRR1013668 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049063 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013543 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013669 | Pre-XDR-TB | lineage2.2.2 | None | SRR22137391 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284828 | MDR-TB | lineage4.3.3 | None | ERR6879041 | MDR-TB | lineage4.1.2.1 | None | SRR25827435 | XDR-TB | lineage2.2.1.1 | None | SRR29093111 | MDR-TB | lineage4.1.1.3 | None | SRR22137467 | Pre-XDR-TB | lineage2.2.1 | None | SRR29094370 | RR-TB | lineage4.1.1.3 | None | SRR10040423 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290552 | MDR-TB | lineage4.7 | None | SRR27107251 | Pre-XDR-TB | lineage4.3.3 | None | SRR29289277 | Pre-XDR-TB | lineage3 | None | ERR10762235 | MDR-TB | lineage2.2.1 | None | ERR4797898 | XDR-TB | lineage2.2.1 | in | ERR4797975 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798295 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR13290550 | MDR-TB | lineage4.7 | None | ERR4799658 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800081 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR22137471 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02398693 | Pre-XDR-TB | lineage2.2.2 | kr | ERR757159 | MDR-TB | lineage4.1.2.1.1 | ar | ERR4813852 | MDR-TB | lineage4.3.3 | br | ERR4813884 | MDR-TB | lineage4.3.3 | br | ERR4813897 | MDR-TB | lineage4.3.3 | None | ERR4813900 | MDR-TB | lineage4.3.3 | br | ERR4830962 | Pre-XDR-TB | lineage2.2.1 | np | ERR7910872 | MDR-TB | lineage4.1.2.1 | pe | ERR4813858 | MDR-TB | lineage4.3.3 | br | ERR4813860 | MDR-TB | lineage4.3.3 | br | ERR4813872 | MDR-TB | lineage4.3.3 | None | ERR4813881 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813883 | MDR-TB | lineage4.3.3 | None | ERR4813891 | Pre-XDR-TB | lineage4.3.3 | None | ERR1679636 | MDR-TB | lineage4.6.2.2 | ng | ERR4813032 | RR-TB | lineage4.1.1.3 | pe | ERR4830910 | Pre-XDR-TB | lineage2.2.1 | np | ERR502959 | RR-TB | lineage4.4.2 | None | ERR4812243 | MDR-TB | lineage4.1.2.1 | None | SRR21747019 | XDR-TB | lineage2.2.1 | None | SRR25827430 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR4800245 | MDR-TB | lineage2.2.1.1 | None | ERR4819542 | MDR-TB | lineage2.2.1 | gb | SRR13180331 | Pre-XDR-TB | lineage4.3.1 | None | SRR28045809 | XDR-TB | lineage2.2.1.1 | None | ERR13258499 | MDR-TB | lineage2.2.1 | None | ERR2041737 | MDR-TB | lineage4.2.2.1 | None | SRR22137479 | Pre-XDR-TB | lineage2.2.1 | None | SRR16915730 | RR-TB | lineage4.1.1.3 | None | SRR28044953 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR3105792 | Pre-XDR-TB | lineage3 | None | ERR11138650 | Pre-XDR-TB | lineage2.2.2 | None | SRR26112776 | Pre-XDR-TB | lineage2.2.1 | None | SRR28046209 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662446 | MDR-TB | lineage4.5 | None |
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