lineage | Count |
---|---|
lineage2.2.1 | 22 |
lineage4.3.3 | 1 |
lineage4.3.4.2.1 | 4 |
lineage2.2.2 | 1 |
lineage4.2.2.2 | 4 |
lineage4.6.4 | 1 |
lineage3 | 3 |
lineage1.1.2 | 1 |
lineage4;lineage2.2.1 | 1 |
lineage4.3.2 | 1 |
lineage3.1.1 | 1 |
lineage2.2.1.1 | 2 |
lineage4.1.3 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 44 |
ID | Drug resistance | Lineage | Country iso2 | ERR2516665 | Pre-XDR-TB | lineage2.2.1 | pe | SRR6832538 | MDR-TB | lineage4.3.3 | None | ERR2707190 | MDR-TB | lineage4.3.4.2.1 | cd | ERR4822357 | Pre-XDR-TB | lineage2.2.2 | None | ERR4830843 | MDR-TB | lineage4.2.2.2 | None | ERR4830842 | MDR-TB | lineage4.2.2.2 | et | SRR6356953 | MDR-TB | lineage2.2.1 | None | SRR6458406 | Pre-XDR-TB | lineage2.2.1 | None | SRR671799 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4822017 | HR-TB | lineage2.2.1 | None | ERR4827944 | MDR-TB | lineage2.2.1 | None | SRR3725717 | MDR-TB | lineage4.6.4 | ci | SRR671815 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6785201 | RR-TB | lineage2.2.1 | None | ERR10748188 | MDR-TB | lineage2.2.1 | None | SRR6824303 | MDR-TB | lineage2.2.1 | cn | ERR067705 | MDR-TB | lineage2.2.1 | ru | ERR10748101 | MDR-TB | lineage2.2.1 | None | ERR5866321 | MDR-TB | lineage2.2.1 | None | ERR10748231 | MDR-TB | lineage2.2.1 | None | ERR4423738 | MDR-TB | lineage4.3.4.2.1 | None | ERR4796714 | MDR-TB | lineage3 | in | ERR4799533 | MDR-TB | lineage3 | None | ERR4800646 | MDR-TB | lineage1.1.2 | None | ERR10762282 | Pre-XDR-TB | lineage4;lineage2.2.1 | None | ERR11043767 | MDR-TB | lineage2.2.1 | None | ERR3470670 | MDR-TB | lineage3 | None | ERR6397178 | MDR-TB | lineage4.2.2.2 | None | ERR6397166 | MDR-TB | lineage4.2.2.2 | None | SRR14781997 | MDR-TB | lineage2.2.1 | None | ERR772258 | MDR-TB | lineage4.3.2 | None | ERR8665827 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774435 | MDR-TB | lineage4.3.4.2.1 | None | ERR9027241 | MDR-TB | lineage3.1.1 | None | SRR11972295 | MDR-TB | lineage2.2.1.1 | None | SRR14801416 | MDR-TB | lineage2.2.1 | None | ERR11069120 | MDR-TB | lineage2.2.1 | None | SRR3724998 | MDR-TB | lineage4.1.3 | ci | ERR9806916 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2510712 | MDR-TB | lineage2.2.1 | it | SRR1723510 | MDR-TB | lineage2.2.1 | cn | SRR3724799 | MDR-TB | lineage4.3.4.2.1 | cd | SRR3725012 | MDR-TB | lineage2.2.1 | th | ERR2516965 | MDR-TB | lineage2.2.1.1 | gb |
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