lineage | Count |
---|---|
lineage2.2.1 | 34 |
lineage4.3.3 | 8 |
lineage4.6.4 | 1 |
lineage4.3.4.2.1 | 4 |
lineage2.2.1.1 | 4 |
lineage4.8 | 1 |
lineage4.3.2 | 1 |
lineage4.2.2.2 | 4 |
lineage3.1.1 | 2 |
lineage3 | 4 |
lineage3.1.2 | 1 |
lineage4.1.3 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage1.1.2 | 1 |
spoligotype | Count |
---|---|
None | 67 |
ID | Drug resistance | Lineage | Country iso2 | SRR671799 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13288998 | MDR-TB | lineage2.2.1 | None | ERR13284716 | MDR-TB | lineage2.2.1 | None | SRR29539345 | MDR-TB | lineage4.3.3 | None | SRR3725717 | MDR-TB | lineage4.6.4 | ci | SRR25207046 | MDR-TB | lineage2.2.1 | None | ERR8665827 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774435 | MDR-TB | lineage4.3.4.2.1 | None | SRR6785201 | RR-TB | lineage2.2.1 | None | ERR10748101 | MDR-TB | lineage2.2.1 | None | ERR2516965 | MDR-TB | lineage2.2.1.1 | gb | SRR29914425 | MDR-TB | lineage2.2.1 | None | SRR3724799 | MDR-TB | lineage4.3.4.2.1 | cd | ERR13261585 | RR-TB | lineage4.8 | None | SRR3725012 | MDR-TB | lineage2.2.1 | th | SRR29274729 | MDR-TB | lineage2.2.1 | None | ERR772258 | MDR-TB | lineage4.3.2 | None | ERR4830842 | MDR-TB | lineage4.2.2.2 | et | SRR11972295 | MDR-TB | lineage2.2.1.1 | None | SRR6356953 | MDR-TB | lineage2.2.1 | None | ERR10748231 | MDR-TB | lineage2.2.1 | None | SRR24256151 | Pre-XDR-TB | lineage4.3.3 | None | ERR6397166 | MDR-TB | lineage4.2.2.2 | None | ERR11798578 | MDR-TB | lineage2.2.1 | None | SRR26937020 | MDR-TB | lineage2.2.1 | None | SRR25207301 | MDR-TB | lineage2.2.1 | None | SRR29539357 | MDR-TB | lineage4.3.3 | None | ERR13432060 | MDR-TB | lineage3.1.1 | None | SRR6824303 | MDR-TB | lineage2.2.1 | cn | SRR29385278 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4423738 | MDR-TB | lineage4.3.4.2.1 | None | ERR9027241 | MDR-TB | lineage3.1.1 | None | ERR10748188 | MDR-TB | lineage2.2.1 | None | ERR067705 | MDR-TB | lineage2.2.1 | ru | SRR26331655 | MDR-TB | lineage4.3.3 | None | SRR24709981 | RR-TB | lineage4.3.3 | None | SRR6832538 | MDR-TB | lineage4.3.3 | None | SRR29539843 | MDR-TB | lineage4.3.3 | None | SRR29772573 | MDR-TB | lineage3 | None | SRR10040206 | MDR-TB | lineage2.2.1 | None | SRR11662237 | MDR-TB | lineage2.2.1 | None | SRR11662632 | MDR-TB | lineage2.2.1.1 | None | SRR27069373 | MDR-TB | lineage2.2.1 | None | ERR2516665 | Pre-XDR-TB | lineage2.2.1 | pe | SRR671815 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4799533 | MDR-TB | lineage3 | None | ERR13266816 | MDR-TB | lineage3.1.2 | None | ERR2707190 | MDR-TB | lineage4.3.4.2.1 | cd | SRR6458406 | Pre-XDR-TB | lineage2.2.1 | None | ERR11069120 | MDR-TB | lineage2.2.1 | None | SRR14781997 | MDR-TB | lineage2.2.1 | None | SRR3724998 | MDR-TB | lineage4.1.3 | ci | SRR26936955 | MDR-TB | lineage2.2.1 | None | SRR1723510 | MDR-TB | lineage2.2.1 | cn | SRR28393312 | Pre-XDR-TB | lineage2.2.1 | None | ERR6397178 | MDR-TB | lineage4.2.2.2 | None | ERR13288736 | MDR-TB | lineage2.2.1 | None | ERR10762282 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR11043767 | MDR-TB | lineage2.2.1 | None | SRR14801416 | MDR-TB | lineage2.2.1 | None | ERR4827944 | MDR-TB | lineage2.2.1 | None | SRR29539621 | MDR-TB | lineage4.3.3 | None | ERR3470670 | MDR-TB | lineage3 | None | ERR4800646 | MDR-TB | lineage1.1.2 | None | ERR2510712 | MDR-TB | lineage2.2.1 | it | ERR4830843 | MDR-TB | lineage4.2.2.2 | None | SRR29440931 | MDR-TB | lineage3 | None |
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