Rv0668 - p.Thr812Ile
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
5 RR-TB
0 HR-TB
90 MDR-TB
44 Pre-XDR-TB
2 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 26 |
| lineage2.2.1.1;lineage3 | 2 |
| lineage4.3.3 | 66 |
| lineage2.2.1.1;lineage3.1.2;lineage4.4 | 1 |
| lineage4.3.4.1 | 10 |
| lineage4.9 | 1 |
| lineage2.2.2 | 5 |
| lineage4.1.1 | 5 |
| lineage4.3.3;lineage4.3.4.1 | 2 |
| lineage2.2.1 | 13 |
| lineage4.6.2.2 | 1 |
| lineage3 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.8 | 3 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1.2 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 141 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15600338 | MDR-TB | lineage2.2.1.1 | None | SRR25827810 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | ERR13261264 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR7911009 | MDR-TB | lineage4.3.3 | None | ERR13261471 | Pre-XDR-TB | lineage2.2.1.1;lineage3.1.2;lineage4.4 | None | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | SRR6511622 | MDR-TB | lineage4.3.4.1 | None | ERR9907694 | MDR-TB | lineage4.3.4.1 | None | ERR4798356 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR1723694 | RR-TB | lineage2.2.1.1 | None | ERR12118043 | MDR-TB | lineage4.3.3 | None | ERR10610134 | MDR-TB | lineage4.9 | None | SRR1013658 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013659 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360608 | Pre-XDR-TB | lineage2.2.2 | kr | SRR1049054 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049055 | Pre-XDR-TB | lineage2.2.2 | None | SRR28393843 | MDR-TB | lineage4.3.3 | None | ERR3287766 | MDR-TB | lineage4.3.3 | pe | ERR3287374 | MDR-TB | lineage4.3.3 | pe | ERR4813536 | MDR-TB | lineage4.3.3 | None | ERR4809053 | MDR-TB | lineage4.3.4.1 | za | ERR7911367 | MDR-TB | lineage4.3.3 | pe | ERR4813007 | MDR-TB | lineage4.3.3 | None | ERR4813019 | MDR-TB | lineage4.3.3 | None | ERR4830909 | Pre-XDR-TB | lineage2.2.1.1 | np | SRR28393431 | MDR-TB | lineage4.3.3 | None | ERR8976068 | MDR-TB | lineage4.1.1 | None | ERR12118056 | Pre-XDR-TB | lineage4.3.3 | None | ERR4815940 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR6879035 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | None | SRR28706623 | MDR-TB | lineage2.2.1 | None | SRR6824430 | RR-TB | lineage2.2.1.1 | cn | ERR13267112 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR10610333 | MDR-TB | lineage4.1.1 | None | SRR8699019 | RR-TB | lineage4.3.4.1 | None | SRR22249661 | MDR-TB | lineage4.6.2.2 | None | SRR10040330 | MDR-TB | lineage2.2.1 | None | SRR29772662 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR15316587 | MDR-TB | lineage2.2.1 | None | ERR13260663 | Pre-XDR-TB | lineage4.3.3 | None | ERR4799358 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798351 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798416 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4811979 | MDR-TB | lineage4.3.3 | pe | ERR11252507 | MDR-TB | lineage4.1.1 | None | ERR4813829 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR2864260 | MDR-TB | lineage4.3.4.1 | pt | ERR3287363 | Pre-XDR-TB | lineage4.3.3 | pe | ERR3287749 | MDR-TB | lineage4.3.3 | pe | ERR12117934 | Pre-XDR-TB | lineage4.3.3 | None | ERR3287426 | MDR-TB | lineage4.3.3 | pe | ERR3287725 | MDR-TB | lineage4.3.3 | pe | SRR28045972 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR28393462 | MDR-TB | lineage4.3.3 | None | ERR751571 | MDR-TB | lineage4.3.3 | pe | ERR7910880 | MDR-TB | lineage4.3.3 | pe | ERR751543 | MDR-TB | lineage4.3.3 | pe | ERR751509 | MDR-TB | lineage4.3.3 | pe | ERR751548 | Pre-XDR-TB | lineage4.3.3 | pe | ERR751416 | MDR-TB | lineage4.3.3 | pe | ERR4830934 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR4830943 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR4813342 | MDR-TB | lineage4.3.3 | pe | SRR18054790 | MDR-TB | lineage2.2.1 | None | SRR6511606 | MDR-TB | lineage4.3.3 | None | ERR2510153 | MDR-TB | lineage4.3.3 | pe | ERR4816578 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR1034748 | MDR-TB | lineage4.3.3 | pe | ERR1034750 | MDR-TB | lineage4.3.3 | pe | SRR28351533 | RR-TB | lineage3 | None | SRR28393412 | MDR-TB | lineage4.3.3 | None | ERR4799342 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR1034798 | MDR-TB | lineage4.3.3 | pe | SRR11662491 | MDR-TB | lineage1.1.3.3 | None | ERR9907797 | MDR-TB | lineage4.3.4.1 | None | SRR25827799 | XDR-TB | lineage4.8 | None | SRR21277573 | MDR-TB | lineage2.2.1 | None | ERR2307696 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370478 | MDR-TB | lineage4.3.3 | None | ERR9992651 | MDR-TB | lineage4.3.3 | None | ERR13261877 | MDR-TB | lineage4.3.3 | None | ERR3273148 | MDR-TB | lineage2.2.1 | None | ERR13267441 | MDR-TB | lineage4.3.3 | None | SRR29772620 | Pre-XDR-TB | lineage4.3.3 | None | ERR13261618 | MDR-TB | lineage4.3.3 | None | SRR25827310 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4813604 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813731 | MDR-TB | lineage4.3.3 | None | SRR7765063 | Pre-XDR-TB | lineage4.8 | None | ERR4025035 | MDR-TB | lineage4.3.3 | None | ERR4816102 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13266112 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13260131 | MDR-TB | lineage4.3.3 | None | ERR2653126 | MDR-TB | lineage4.4.1.1 | None | SRR28393429 | MDR-TB | lineage4.3.3 | None | ERR1034757 | MDR-TB | lineage4.3.3;lineage4.3.4.1 | pe | ERR4796571 | Pre-XDR-TB | lineage4.8 | in | SRR25207185 | MDR-TB | lineage2.2.1 | None | ERR4797322 | MDR-TB | lineage2.2.1.2 | in | ERR4813563 | MDR-TB | lineage4.3.3 | None | ERR4798305 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR13261885 | MDR-TB | lineage4.3.3 | None | ERR6879034 | MDR-TB | lineage4.3.3 | None | ERR2864279 | MDR-TB | lineage4.3.3 | pt | ERR3287786 | MDR-TB | lineage4.3.3 | pe | SRR28393460 | MDR-TB | lineage4.3.3 | None | ERR3287813 | MDR-TB | lineage4.3.3 | pe | SRR28706472 | MDR-TB | lineage2.2.1 | None | SRR28393844 | MDR-TB | lineage4.3.3 | None | ERR4812776 | MDR-TB | lineage4.3.3 | pe | ERR3287818 | MDR-TB | lineage4.3.3 | pe | ERR4812806 | MDR-TB | lineage4.3.3 | pe | ERR775328 | MDR-TB | lineage4.3.3 | pe | ERR4830930 | Pre-XDR-TB | lineage2.2.1.1 | np | SRR28393314 | MDR-TB | lineage4.3.3 | None | ERR7911376 | MDR-TB | lineage4.3.3 | pe | ERR4811316 | MDR-TB | lineage2.2.1 | cn | ERR751616 | MDR-TB | lineage4.3.3 | pe | ERR2653197 | MDR-TB | lineage4.4.1.1 | None | ERR2432994 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR13260617 | MDR-TB | lineage4.3.3 | None | ERR13284262 | MDR-TB | lineage4.3.4.1 | None | SRR5341238 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR9806671 | MDR-TB | lineage4.1.1 | None | ERR2307381 | Pre-XDR-TB | lineage2.2.1 | None | ERR6879047 | MDR-TB | lineage4.3.3 | None | SRR21887788 | MDR-TB | lineage2.2.1 | None | SRR10040465 | Pre-XDR-TB | lineage4.5 | None | ERR6865602 | MDR-TB | lineage4.3.3 | None | SRR25827343 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | SAMN03246428 | RR-TB | lineage2.2.1.1 | None | ERR4796368 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11488522 | MDR-TB | lineage4.1.1 | None | ERR12117983 | MDR-TB | lineage4.3.3 | None | SRR25206930 | MDR-TB | lineage2.2.1 | None | ERR13260192 | MDR-TB | lineage4.3.3 | None | ERR6879033 | MDR-TB | lineage4.3.3 | None | ERR13261575 | MDR-TB | lineage4.3.3 | None | ERR11081241 | MDR-TB | lineage4.3.4.1 | None | SRR25827344 | XDR-TB | lineage2.2.1.1 | None |
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