SRR1228674
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1231818
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1232424
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR11798599
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1222866
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1228675
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR25207190
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1214086
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1213958
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1214148
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR4811291
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR1233405
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR14802202
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10869302
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR10380078
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1222374
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1222411
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1723691
|
Pre-XDR-TB
|
lineage2.2.1.1
|
cn
|
SRR1231810
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1232079
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1214140
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR28351196
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6824389
|
Pre-XDR-TB
|
lineage2.2.1.1
|
cn
|
ERR10762476
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14782447
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14782828
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11798597
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14782139
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29093844
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR5864952
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11798595
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3335776
|
Pre-XDR-TB
|
lineage3
|
pk
|
SRR14801958
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7646071
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23310896
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1219053
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1221612
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1222999
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR3077963
|
MDR-TB
|
lineage3.1.1;lineage4.2.2.2
|
None
|
SRR1226230
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1214087
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1220254
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR5987234
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR14807667
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR2516616
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
SRR1221157
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1214388
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1229834
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR25206958
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1214261
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1214443
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1220223
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1221666
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1232096
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR10112875
|
MDR-TB
|
lineage2.2.1.1;lineage4.3.2.1
|
None
|
SRR1218657
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1232863
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1218488
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1220118
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1215682
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1223196
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR11798598
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28498420
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351501
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9120036
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR1221641
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR10397115
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1221031
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR5864954
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1217053
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1220253
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1223486
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1231812
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR7646004
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3743393
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1223519
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR1023472
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR13285780
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1214226
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1226187
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1232852
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1223066
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR5987324
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR7755695
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10748309
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR5864958
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1228678
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR5864955
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23310864
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3077956
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR1232666
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1232797
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1215686
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR14802029
|
XDR-TB
|
lineage2.2.1;lineage4
|
None
|
SRR1228669
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1221259
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1222265
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1215478
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1226235
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR14807651
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1220623
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1218487
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR14782643
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864953
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1222936
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1229622
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1222405
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1232522
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR28351243
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351276
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR7646015
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10762406
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1214397
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR14807555
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1232824
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1221187
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR9119795
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR10112891
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR1232932
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR10380104
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3335777
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR13285854
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207010
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5864957
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14781870
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1225522
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR14802125
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR14802090
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1232999
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1219241
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR10762477
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5864956
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1215449
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR11798596
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1214763
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR14781920
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9120035
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR1226993
|
RR-TB
|
lineage4.1.2.1
|
None
|
SRR1214368
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR7911691
|
MDR-TB
|
lineage2.2.1
|
za
|
SRR28351303
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14801316
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10380105
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1218950
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1222199
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR23310819
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28351503
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3077964
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR1227561
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1223221
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1231758
|
RR-TB
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR5917980
|
Pre-XDR-TB
|
lineage4.3.2.1
|
za
|