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SRA data
Rv0678
- c.141_142dupTC
Drug resistance types
0 Sensitive
0 RR-TB
1 HR-TB
10 MDR-TB
0 Pre-XDR-TB
41 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.3.3
15
lineage2.2.1
12
lineage2.2.2
6
lineage4.1.1.3
4
lineage4.1.2.1
3
lineage4.8
2
lineage2.2.1.1
2
lineage2.2.1;lineage3
1
lineage3.1.1
1
lineage3
1
Showing 1 to 10 of 15 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
52
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR10112840
XDR-TB
lineage4.1.1.3
None
ERR10748130
HR-TB
lineage2.2.1.1
None
ERR11488984
XDR-TB
lineage4.3.2
None
ERR13260501
XDR-TB
lineage2.2.2
None
ERR13266752
XDR-TB
lineage3.1.2.1
None
ERR1352352
XDR-TB
lineage2.2.1
cn
ERR1352353
XDR-TB
lineage2.2.1
cn
ERR2653131
XDR-TB
lineage4.1.2.1
None
ERR4797180
XDR-TB
lineage2.2.1
in
ERR4809304
XDR-TB
lineage4.3.2.1
za
Showing 1 to 10 of 52 entries
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