Rv0678 - c.141_142dupTC
Drug resistance types
0 Sensitive
1 RR-TB
1 HR-TB
6 MDR-TB
31 Pre-XDR-TB
4 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 13 |
| lineage2.2.1 | 9 |
| lineage2.2.2 | 5 |
| lineage4.1.1.3 | 4 |
| lineage4.8 | 2 |
| lineage3.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.1.2.1 | 2 |
| lineage3;lineage2.2.1 | 1 |
| lineage4 | 1 |
| lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 43 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4809304 | Pre-XDR-TB | lineage4.3.2.1 | za | ERR8975509 | XDR-TB | lineage4.4.1.1 | None | ERR9992893 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992646 | MDR-TB | lineage4.3.3 | None | ERR9992743 | MDR-TB | lineage4.3.3 | None | ERR9992777 | MDR-TB | lineage2.2.1 | None | ERR9992835 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975783 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975742 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9992691 | Pre-XDR-TB | lineage4.8 | None | ERR9993114 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9992905 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992997 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993093 | MDR-TB | lineage4.3.3 | None | ERR9993072 | Pre-XDR-TB | lineage4.8 | None | ERR9993127 | MDR-TB | lineage4.3.3 | None | ERR9993209 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9993156 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993154 | Pre-XDR-TB | lineage3.1.1 | None | ERR9993161 | Pre-XDR-TB | lineage2.2.2 | None | ERR9993235 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993211 | XDR-TB | lineage2.2.1 | None | ERR9993226 | MDR-TB | lineage2.2.2 | None | SRR1173370 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993259 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1173276 | Pre-XDR-TB | lineage4.3.3 | None | SRR11871431 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184300 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196542 | Pre-XDR-TB | lineage4.3.3 | None | ERR10112840 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR13232740 | XDR-TB | lineage2.2.1 | None | SRR13232781 | XDR-TB | lineage2.2.1 | None | SRR25827813 | Pre-XDR-TB | lineage2.2.1 | None | SRR24466801 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR1352353 | Pre-XDR-TB | lineage2.2.1 | cn | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR1352352 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4797180 | Pre-XDR-TB | lineage2.2.1 | in | SAMN02586017 | Pre-XDR-TB | lineage4.3.3 | za | SRR5341303 | RR-TB | lineage4 | None | ERR2653131 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488984 | Pre-XDR-TB | lineage4.3.2 | None | ERR10748130 | HR-TB | lineage2.2.1.1 | None |
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