lineage | Count |
---|---|
lineage2.2.1 | 38 |
lineage4.4.1.1 | 1 |
lineage4.3.3 | 4 |
lineage1.2.2.2 | 1 |
lineage2.2.2 | 1 |
lineage4.2.2 | 1 |
lineage3 | 2 |
spoligotype | Count |
---|---|
None | 48 |
ID | Drug resistance | Lineage | Country iso2 | ERR5865278 | MDR-TB | lineage2.2.1 | None | SRR21277286 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864863 | Pre-XDR-TB | lineage2.2.1 | None | ERR3148195 | Sensitive | lineage4.4.1.1 | mx | ERR13288938 | Pre-XDR-TB | lineage4.3.3 | None | ERR5864849 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864858 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971057 | Pre-XDR-TB | lineage4.3.3 | None | ERR5864862 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993253 | Pre-XDR-TB | lineage4.3.3 | None | SRR16087967 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865275 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865253 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865276 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864851 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864855 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864864 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516344 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082345 | MDR-TB | lineage2.2.1 | None | ERR5865254 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864859 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911395 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864856 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911396 | Pre-XDR-TB | lineage2.2.1 | None | SRR21657658 | Sensitive | lineage2.2.1 | None | SRR26558635 | HR-TB | lineage1.2.2.2 | None | ERR5864853 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864854 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864857 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865252 | Pre-XDR-TB | lineage2.2.1 | None | ERR13288930 | Pre-XDR-TB | lineage2.2.2 | None | ERR5865277 | MDR-TB | lineage2.2.1 | None | ERR5864865 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864850 | Pre-XDR-TB | lineage2.2.1 | None | ERR13430445 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262159 | Sensitive | lineage2.2.1 | None | ERR5865255 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911397 | Pre-XDR-TB | lineage2.2.1 | None | ERR13430440 | Pre-XDR-TB | lineage2.2.1 | None | ERR13430444 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824480 | MDR-TB | lineage4.2.2 | cn | ERR4799304 | Sensitive | lineage3 | in | SRR21732940 | Sensitive | lineage3 | None | ERR5864860 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864861 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992884 | MDR-TB | lineage4.3.3 | None | ERR5865279 | MDR-TB | lineage2.2.1 | None | ERR5864852 | Pre-XDR-TB | lineage2.2.1 | None |
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