Rv0682 - c.9C>T
Drug resistance types
1 Sensitive
7 RR-TB
0 HR-TB
3 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
305 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2.BCG | 312 |
| La1.8.2;La1.2.BCG | 1 |
| lineage4.1.2 | 1 |
| lineage4;La1.2.BCG | 1 |
| La1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 317 |
Geographic prevalence
Country level data for this variant is available for 62 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14782003 | Other | La1.2.BCG | None | SRR14781838 | Other | La1.2.BCG | None | SRR14781940 | Other | La1.2.BCG | None | SRR13986557 | Other | La1.8.2;La1.2.BCG | None | SRR14782268 | Other | La1.2.BCG | None | SRR14782351 | Other | La1.2.BCG | None | SRR14782465 | Other | La1.2.BCG | None | SRR14782722 | Other | La1.2.BCG | None | SRR14782548 | Other | La1.2.BCG | None | SRR14782713 | Other | La1.2.BCG | None | SRR14801882 | Other | La1.2.BCG | None | SRR14782719 | Other | La1.2.BCG | None | SRR14782824 | Other | La1.2.BCG | None | SRR14802226 | Other | La1.2.BCG | None | SRR14807675 | Other | La1.2.BCG | None | SRR14802224 | Other | La1.2.BCG | None | SRR15676433 | Other | La1.2.BCG | None | SRR15676435 | Other | La1.2.BCG | None | SRR15676438 | Other | La1.2.BCG | None | SRR15676437 | Other | La1.2.BCG | None | SRR15676434 | Other | La1.2.BCG | None | SRR16058167 | Other | La1.2.BCG | None | SRR16058141 | Other | La1.2.BCG | None | SRR15676436 | Other | La1.2.BCG | None | SRR15676439 | Other | La1.2.BCG | None | SRR16058128 | Other | La1.2.BCG | None | SRR16058264 | Other | La1.2.BCG | None | SRR16058186 | Other | La1.2.BCG | None | SRR16089408 | Other | La1.2.BCG | None | SRR16058482 | Other | La1.2.BCG | None | SRR16089681 | Other | La1.2.BCG | None | SRR16089543 | Other | La1.2.BCG | None | SRR16089542 | Other | La1.2.BCG | None | SRR16089905 | Other | La1.2.BCG | None | SRR1735643 | Other | La1.2.BCG | gb | ERR11050679 | Other | La1.2.BCG | None | SRR1735567 | Other | La1.2.BCG | None | SRR1735661 | Other | La1.2.BCG | gb | SRR1735707 | Other | La1.2.BCG | None | SRR16097556 | Other | La1.2.BCG | None | SRR16100722 | Other | La1.2.BCG | None | SRR16278275 | Other | La1.2.BCG | None | SRR17592374 | Other | La1.2.BCG | None | SRR1735706 | Other | La1.2.BCG | gb | SRR1735681 | Other | La1.2.BCG | gb | SRR1735703 | Other | La1.2.BCG | gb | SRR17592368 | Other | La1.2.BCG | None | SRR17592376 | Other | La1.2.BCG | None | SRR17592382 | Other | La1.2.BCG | None | SRR17592369 | Other | La1.2.BCG | None | SRR17592380 | Other | La1.2.BCG | None | SRR17592377 | Other | La1.2.BCG | None | SRR17592379 | Other | La1.2.BCG | None | SRR17592387 | Other | La1.2.BCG | None | SRR17592386 | Other | La1.2.BCG | None | SRR17592378 | Other | La1.2.BCG | None | SRR17592383 | Other | La1.2.BCG | None | SRR17592384 | Other | La1.2.BCG | None | SRR17592385 | Other | La1.2.BCG | None | SRR17592381 | Other | La1.2.BCG | None | SRR18897163 | Other | La1.2.BCG | None | SRR18911455 | Other | La1.2.BCG | None | SRR18911229 | Other | La1.2.BCG | None | SRR18897169 | Other | La1.2.BCG | None | ERR11067742 | Other | La1.2.BCG | None | SRR21878053 | Other | La1.2.BCG | None | SRR21878054 | Other | La1.2.BCG | None | ERR11067904 | Other | La1.2.BCG | None | ERR11068388 | Other | La1.2.BCG | None | ERR11067938 | Other | La1.2.BCG | None | ERR11068110 | Other | La1.2.BCG | None | SRR8102332 | Other | La1.2.BCG | None | ERR11068638 | Other | La1.2.BCG | None | ERR4815180 | Other | La1.2.BCG | gb | ERR161048 | Other | La1.2.BCG | mw | ERR4815226 | Other | La1.2.BCG | gb | SRR3647355 | Other | La1.2.BCG | None | ERR4815781 | Other | La1.2.BCG | gb | ERR4814567 | Other | La1.2.BCG | None | ERR4814591 | Other | La1.2.BCG | None | SRR3675257 | Other | La1.2.BCG | gb | ERR11049622 | Other | La1.2.BCG | None | SRR3675315 | Other | La1.2.BCG | None | ERR4814867 | Other | La1.2.BCG | gb | ERR4814840 | Other | La1.2.BCG | None | ERR4815533 | Other | La1.2.BCG | gb | ERR4816011 | Other | La1.2.BCG | gb | ERR4817318 | Other | La1.2.BCG | gb | ERR4816167 | Other | La1.2.BCG | gb | ERR4816052 | Other | La1.2.BCG | None | ERR4816055 | Other | La1.2.BCG | None | ERR4816090 | Other | La1.2.BCG | None | ERR11049655 | Other | La1.2.BCG | None | ERR4817396 | RR-TB | La1.2.BCG | None | ERR212052 | Other | La1.2.BCG | mw | ERR4816465 | Other | La1.2.BCG | gb | ERR4817185 | Other | La1.2.BCG | gb | ERR4816595 | Other | La1.2.BCG | gb | ERR4816666 | Other | La1.2.BCG | gb | ERR4817421 | Other | La1.2.BCG | gb | ERR4816682 | Other | La1.2.BCG | gb | ERR11050992 | Other | La1.2.BCG | None | ERR228166 | Other | La1.2.BCG | None | ERR4816886 | Other | La1.2.BCG | None | ERR4819064 | Other | La1.2.BCG | gb | ERR4818704 | Other | La1.2.BCG | gb | SRR4035836 | Sensitive | lineage4.1.2 | None | ERR234151 | Other | La1.2.BCG | None | ERR4818051 | Other | La1.2.BCG | None | ERR4818819 | Other | La1.2.BCG | gb | ERR4818422 | Other | La1.2.BCG | gb | ERR2512549 | Other | La1.2.BCG | gb | ERR4818297 | Other | La1.2.BCG | gb | ERR4818908 | Other | La1.2.BCG | None | SAMN02414848 | Other | La1.2.BCG | se | ERR2516376 | Other | La1.2.BCG | be | ERR4818639 | Other | La1.2.BCG | None | ERR4819139 | RR-TB | La1.2.BCG | None | ERR4818509 | RR-TB | La1.2.BCG | gb | ERR4817646 | Other | La1.2.BCG | None | ERR4820706 | Other | La1.2.BCG | None | ERR4819270 | Other | La1.2.BCG | gb | ERR11049331 | Other | La1.2.BCG | None | ERR4820278 | Other | La1.2.BCG | None | ERR4820289 | Other | La1.2.BCG | gb | ERR4819463 | Other | La1.2.BCG | None | ERR4819451 | Other | La1.2.BCG | None | ERR2517166 | Other | La1.2.BCG | nl | ERR2517179 | Other | La1.2.BCG | nl | ERR4820343 | Other | La1.2.BCG | gb | ERR4819733 | Other | La1.2.BCG | gb | ERR4820361 | Other | La1.2.BCG | None | ERR4820855 | Other | La1.2.BCG | gb | ERR4819691 | Other | La1.2.BCG | None | ERR4819762 | Other | La1.2.BCG | None | ERR2516215 | Other | La1.2.BCG | be | ERR4819826 | Other | La1.2.BCG | None | ERR4820780 | RR-TB | La1.2.BCG | gb | ERR2514832 | Other | La1.2.BCG | None | ERR4820009 | Other | La1.2.BCG | gb | ERR551427 | Other | La1.2.BCG | None | ERR2517304 | Other | lineage4;La1.2.BCG | nl | ERR4820602 | Other | La1.2.BCG | gb | ERR2516191 | Other | La1.2.BCG | be | ERR4820842 | Other | La1.2.BCG | gb | ERR2517495 | Other | La1.2.BCG | nl | ERR2516307 | Other | La1.2.BCG | be | ERR2516311 | Other | La1.2.BCG | be | ERR4820186 | Other | La1.2.BCG | None | ERR4820965 | Other | La1.2.BCG | gb | SRR5485728 | Other | La1.2.BCG | None | ERR4821117 | Other | La1.2.BCG | None | ERR4821255 | Other | La1.2.BCG | None | ERR4821440 | Other | La1.2.BCG | None | ERR4822011 | Other | La1.2.BCG | gb | ERR4822030 | Other | La1.2.BCG | None | ERR4822100 | Other | La1.2.BCG | None | ERR4822040 | Other | La1.2.BCG | None | ERR4822052 | Other | La1.2.BCG | None | ERR4821464 | Other | La1.2.BCG | None | ERR4821455 | Other | La1.2.BCG | gb | ERR4822113 | Other | La1.2.BCG | None | SRR6045637 | Other | La1.2.BCG | None | ERR4821547 | Other | La1.2.BCG | None | ERR4821698 | Other | La1.2.BCG | None | ERR4821748 | Other | La1.2.BCG | None | SRR6046018 | Other | La1.2.BCG | None | SRR6045990 | Other | La1.2.BCG | None | SRR6046156 | Other | La1.2.BCG | None | SRR6045068 | Other | La1.2 | None | ERR2815610 | Other | La1.2.BCG | None | ERR2815602 | Other | La1.2.BCG | None | ERR4829455 | Other | La1.2.BCG | it | ERR4829038 | Other | La1.2.BCG | it | ERR11049744 | Other | La1.2.BCG | None | ERR4829548 | Other | La1.2.BCG | it | ERR4829499 | Other | La1.2.BCG | None | ERR4829642 | Other | La1.2.BCG | it | ERR4829543 | Other | La1.2.BCG | it | ERR4829633 | Other | La1.2.BCG | it | ERR4829644 | Other | La1.2.BCG | it | ERR4831182 | Other | La1.2.BCG | de | SRR6046614 | Other | La1.2.BCG | None | ERR11067380 | Other | La1.2.BCG | None | ERR4829650 | Other | La1.2.BCG | None | ERR5102809 | Other | La1.2.BCG | None | ERR11049787 | Other | La1.2.BCG | None | SRR6930897 | XDR-TB | La1.2.BCG | None | SRR8234774 | Other | La1.2.BCG | None | ERR5102811 | Other | La1.2.BCG | None | SRR7983756 | Other | La1.2.BCG | None | ERR5102810 | Other | La1.2.BCG | None | SRR7983754 | Other | La1.2.BCG | None | ERR11067503 | Other | La1.2.BCG | None | SRR9596056 | RR-TB | La1.2.BCG | None | SRR8234778 | Other | La1.2.BCG | None | SRR9596057 | Other | La1.2.BCG | None | SRR9596064 | Other | La1.2.BCG | None | SRR9596059 | Other | La1.2.BCG | None | SRR9596061 | Other | La1.2.BCG | None | SRR9596058 | Other | La1.2.BCG | None | SRR9596060 | Other | La1.2.BCG | None | SRR9596063 | Other | La1.2.BCG | None | SRR9596066 | Other | La1.2.BCG | None | SRR9596065 | Other | La1.2.BCG | None | SRR9596062 | Other | La1.2.BCG | None | SRR8668953 | Other | La1.2.BCG | None | SRR9596067 | Other | La1.2.BCG | None | SRR9596068 | Other | La1.2.BCG | None | SRR9596069 | RR-TB | La1.2.BCG | None | SRR9596070 | Other | La1.2.BCG | None | SRR7496578 | Other | La1.2.BCG | None | ERR11067586 | Other | La1.2.BCG | None | ERR11067543 | Other | La1.2.BCG | None | SRR8886989 | Other | La1.2.BCG | None | SRR8886988 | Other | La1.2.BCG | None | ERR11043674 | Other | La1.2.BCG | None | ERR017778 | Other | La1.2.BCG | None | ERR019852 | Other | La1.2.BCG | None | DRR305355 | Other | La1.2.BCG | None | ERR1034667 | Other | La1.2.BCG | bg | ERR1035141 | Other | La1.2.BCG | sa | ERR11043503 | Other | La1.2.BCG | None | ERR11044379 | Other | La1.2.BCG | None | ERR11044175 | Other | La1.2.BCG | None | ERR4797984 | Other | La1.2.BCG | in | ERR4195591 | Other | La1.2.BCG | None | ERR11044748 | Other | La1.2.BCG | None | ERR387001 | Other | La1.2.BCG | None | ERR400388 | Other | La1.2.BCG | None | ERR4363286 | Other | La1.2.BCG | None | ERR4363287 | Other | La1.2.BCG | None | ERR11049842 | Other | La1.2.BCG | None | ERR11049843 | Other | La1.2.BCG | None | ERR757417 | Other | La1.2.BCG | None | ERR757353 | Other | La1.2 | None | ERR766218 | Other | La1.2.BCG | None | ERR766224 | Other | La1.2.BCG | None | ERR766214 | Other | La1.2.BCG | None | ERR766217 | Other | La1.2.BCG | None | ERR766216 | Other | La1.2.BCG | None | ERR766225 | Other | La1.2.BCG | None | ERR766213 | Other | La1.2.BCG | None | ERR766219 | Other | La1.2.BCG | None | ERR766222 | Other | La1.2.BCG | None | ERR766220 | Other | La1.2.BCG | None | ERR766226 | Other | La1.2.BCG | None | ERR766215 | Other | La1.2.BCG | None | ERR766223 | Other | La1.2.BCG | None | ERR766221 | Other | La1.2.BCG | None | ERR11049990 | Other | La1.2.BCG | None | ERR9121663 | Other | La1.2.BCG | None | ERR9125581 | Other | La1.2.BCG | None | ERR9125558 | Other | La1.2.BCG | None | ERR9811808 | Other | La1.2.BCG | None | ERR9125853 | Other | La1.2.BCG | None | ERR9899661 | Other | La1.2.BCG | None | ERR9125703 | Other | La1.2.BCG | None | ERR9125787 | Other | La1.2.BCG | None | ERR9125888 | Other | La1.2.BCG | None | ERR9286004 | Other | La1.2.BCG | None | SRR10232124 | Other | La1.2.BCG | None | SRR10232121 | Other | La1.2.BCG | None | SRR10232122 | Other | La1.2.BCG | None | SRR10232123 | Other | La1.2.BCG | None | SRR10303300 | Other | La1.2.BCG | None | SRR10321144 | Other | La1.2.BCG | None | SRR10321135 | Other | La1.2.BCG | None | SRR10321131 | Other | La1.2.BCG | None | SRR10379919 | Other | La1.2.BCG | None | SRR10321147 | Other | La1.2.BCG | None | SRR10321153 | Other | La1.2.BCG | None | SRR10997357 | Other | La1.2.BCG | None | SRR10430327 | Other | La1.2.BCG | None | SRR10997359 | Other | La1.2.BCG | None | SRR10997360 | MDR-TB | La1.2.BCG | None | SRR10997354 | Other | La1.2.BCG | None | SRR10997356 | Other | La1.2.BCG | None | SRR10997355 | Other | La1.2.BCG | None | SRR10997362 | MDR-TB | La1.2.BCG | None | SRR10997361 | MDR-TB | La1.2.BCG | None | SRR10997358 | RR-TB | La1.2.BCG | None | SRR1166866 | Other | La1.2.BCG | None | SRR1162747 | Other | La1.2.BCG | None | SRR1165461 | Other | La1.2.BCG | None | ERR11050420 | Other | La1.2.BCG | None | SRR1167144 | Other | La1.2.BCG | None | SRR13014435 | Other | La1.2.BCG | None | ERR11050474 | Other | La1.2.BCG | None | SRR13180228 | Other | La1.2.BCG | None | SRR13180255 | Other | La1.2.BCG | None | SRR13180234 | Other | La1.2.BCG | None | SRR13180304 | Other | La1.2.BCG | None | SRR13180285 | Other | La1.2.BCG | None | SRR13180244 | Other | La1.2.BCG | None | SRR13180278 | Other | La1.2.BCG | None | SRR13180287 | Other | La1.2.BCG | None | SRR13180338 | Other | La1.2.BCG | None | SRR13180318 | Other | La1.2.BCG | None | SRR13399336 | Other | La1.2.BCG | None | SRR13180347 | Other | La1.2.BCG | None | SRR13180348 | Other | La1.2.BCG | None | SRR13180379 | Other | La1.2.BCG | None | SRR13399330 | Other | La1.2.BCG | None | SRR13399334 | Other | La1.2.BCG | None | SRR13399333 | Other | La1.2.BCG | None | SRR13399335 | Other | La1.2.BCG | None | SRR13399340 | Other | La1.2.BCG | None | SRR13399331 | Other | La1.2.BCG | None | SRR13399341 | Other | La1.2.BCG | None | SRR13399332 | Other | La1.2.BCG | None | SRR13399339 | Other | La1.2.BCG | None | SRR13399338 | Other | La1.2.BCG | None | SRR13399342 | Other | La1.2.BCG | None | SRR13399337 | Other | La1.2.BCG | None | SRR13399343 | Other | La1.2.BCG | None | SRR13767788 | Other | La1.2.BCG | None |
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