Rv0682 - p.Lys88Met
Drug resistance types
0 Sensitive
4 RR-TB
29 HR-TB
94 MDR-TB
29 Pre-XDR-TB
4 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 18 |
| lineage4.3.3 | 14 |
| lineage4.3.2 | 1 |
| lineage4.1 | 1 |
| lineage4.8 | 6 |
| lineage1.1.2 | 6 |
| lineage4.1.2.1 | 7 |
| lineage4.6.2.2 | 2 |
| lineage1.2.2.2 | 2 |
| lineage1.1.3.1 | 3 |
| 9 | |
| lineage1.1.3 | 1 |
| lineage4 | 4 |
| lineage1.1.1 | 1 |
| lineage4.2.1 | 21 |
| lineage4.2.1;lineage2.2.1 | 2 |
| lineage1.1.1.1 | 6 |
| lineage4.3.3;lineage4.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.2.2.2;lineage3.1.1;lineage2.2.1;lineage1.1.2 | 1 |
| lineage4.3.3;lineage4.2.2.2;lineage3.1.1;lineage2.2;lineage1.1 | 1 |
| lineage4.2.2.2;lineage3.1.1;lineage2.2.1 | 1 |
| lineage4.2.2.2;lineage3.1.1;lineage1.1.2 | 1 |
| lineage4.3.3;lineage4.2.2.2;lineage3.1.1;lineage2.2.1 | 1 |
| lineage4.5 | 2 |
| lineage1.2.2.2;La1.3 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.2.2.2;lineage2.2.1 | 1 |
| lineage3 | 9 |
| lineage3.1.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.6.4;lineage4.3.3 | 1 |
| lineage4.4.1.2 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage5.1.5 | 8 |
| lineage5.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.2.2.2 | 12 |
| lineage4.3.4.1 | 1 |
| lineage4.2.2.2;lineage3.1.1 | 2 |
| lineage4.2.2 | 1 |
| lineage4.3.1 | 4 |
| lineage4.2.1.1 | 1 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.4.1.2;lineage2.2.1 | 1 |
| lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 170 |
Geographic prevalence
Country level data for this variant is available for 51 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21733095 | Other | lineage2.2.1 | None | ERR9029858 | MDR-TB | lineage4.3.3 | None | ERR772260 | MDR-TB | lineage4.3.2 | None | ERR8773958 | Other | lineage4.1 | None | SRR10525335 | MDR-TB | lineage4.8 | None | ERR9030519 | MDR-TB | lineage1.1.2 | None | SRR10380054 | HR-TB | lineage4.1.2.1 | None | ERR9030384 | MDR-TB | lineage1.1.2 | None | ERR9119556 | Pre-XDR-TB | lineage4.6.2.2 | None | ERR9125268 | RR-TB | lineage1.2.2.2 | None | SRR1163305 | MDR-TB | lineage1.1.3.1 | None | SRR1144834 | MDR-TB | None | SRR1163293 | MDR-TB | lineage1.1.3.1 | None | SRR1146286 | MDR-TB | lineage1.1.3 | None | SRR12142419 | HR-TB | lineage2.2.1 | None | SRR1166317 | HR-TB | lineage4 | None | SRR11662163 | MDR-TB | lineage1.1.1 | None | SRR14782793 | MDR-TB | lineage4.2.1 | None | SRR14782794 | MDR-TB | lineage4.2.1 | None | SRR14801981 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR14801544 | HR-TB | lineage4.1.2.1 | None | SRR14801615 | MDR-TB | lineage4.2.1 | None | SRR14801614 | MDR-TB | lineage4.2.1 | None | SRR16370414 | MDR-TB | lineage1.1.1.1 | None | SRR14807644 | MDR-TB | lineage4.2.1 | None | SRR16058393 | RR-TB | lineage1.2.2.2 | None | SRR14801991 | MDR-TB | lineage4.2.1 | None | SRR14802012 | MDR-TB | lineage4.2.1 | None | SRR14802041 | Pre-XDR-TB | lineage4.3.3;lineage4.2.1 | None | SRR14802075 | MDR-TB | lineage4.2.1 | None | SRR14807475 | MDR-TB | lineage4.2.1 | None | SRR14807558 | MDR-TB | lineage4.2.1 | None | SRR18002883 | Pre-XDR-TB | lineage2.2.1 | None | SRR16509481 | MDR-TB | lineage4.3.3 | None | SRR16370461 | MDR-TB | lineage4.3.4.2 | None | SRR18003008 | Pre-XDR-TB | lineage2.2.2 | None | SRR18715198 | MDR-TB | lineage4.1.2.1 | None | SRR19392724 | MDR-TB | lineage4.2.2.2;lineage3.1.1;lineage2.2.1;lineage1.1.2 | None | SRR19428523 | HR-TB | lineage4.3.3;lineage4.2.2.2;lineage3.1.1;lineage2.2;lineage1.1 | None | SRR19428504 | MDR-TB | lineage4.2.2.2;lineage3.1.1;lineage2.2.1 | None | SRR19428529 | MDR-TB | lineage4.2.2.2;lineage3.1.1;lineage1.1.2 | None | SRR20969660 | MDR-TB | lineage2.2.1 | None | SRR19428563 | Other | lineage4.3.3;lineage4.2.2.2;lineage3.1.1;lineage2.2.1 | None | ERR11080894 | HR-TB | lineage4.5 | None | SRR25340859 | MDR-TB | lineage1.2.2.2;La1.3 | None | SRR21576712 | MDR-TB | lineage1.2.1.2 | None | SRR22175219 | XDR-TB | lineage4.2.2.2;lineage2.2.1 | None | SRR21674628 | MDR-TB | lineage3 | None | ERR11082614 | MDR-TB | lineage1.1.2 | None | ERR11080891 | MDR-TB | lineage4.3.3 | None | ERR11081477 | MDR-TB | lineage4.2.1 | None | ERR11081075 | MDR-TB | lineage3.1.1 | None | ERR11081389 | MDR-TB | lineage4.2.2.1 | None | ERR11082948 | MDR-TB | lineage4 | None | SRR26112448 | HR-TB | lineage4.3.3 | None | SRR23938656 | Other | lineage2.2.1 | None | ERR11243582 | MDR-TB | lineage4.2.1 | None | SRR25340828 | HR-TB | lineage1.2.2.2;La1.3 | None | SRR25827778 | MDR-TB | lineage2.2.1 | None | SAMEA2534726 | HR-TB | lineage2.2.1 | th | SRR1723619 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5341322 | Pre-XDR-TB | lineage3 | in | SRR5485411 | MDR-TB | None | SRR3086367 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035319 | MDR-TB | lineage4.6.4;lineage4.3.3 | br | SRR3085296 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035329 | Pre-XDR-TB | lineage4.3.3 | br | ERR3275322 | HR-TB | lineage1.1.1.1 | nl | SRR1723776 | MDR-TB | lineage2.2.1 | cn | ERR1034735 | MDR-TB | lineage4.3.3 | pe | SRR6824586 | MDR-TB | lineage2.2.1 | cn | SRR6824379 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5485403 | RR-TB | None | SRR5485400 | MDR-TB | None | ERR2510607 | Pre-XDR-TB | lineage3 | None | SRR5065268 | HR-TB | lineage4.5 | vn | SRR5065206 | HR-TB | lineage4.4.1.2 | vn | SRR5485404 | MDR-TB | None | SRR5067455 | Other | lineage1.1.1.1 | vn | ERR2510394 | Pre-XDR-TB | lineage2.2.1 | None | ERR551563 | Other | lineage3 | None | ERR552036 | XDR-TB | lineage4.3.3 | None | SRR5153719 | Pre-XDR-TB | lineage4.2.1 | None | ERR751438 | MDR-TB | lineage4.1.2.1 | pe | SRR1166137 | Pre-XDR-TB | lineage4.8 | ro | ERR553139 | MDR-TB | lineage2.2.1 | uz | SRR2100064 | Other | lineage3 | None | ERR7911149 | MDR-TB | lineage1.1.1.1 | vn | SAMN02414928 | MDR-TB | lineage1.1.3.1 | se | SRR5338521 | MDR-TB | lineage1.2.1.2.1 | None | ERR1203070 | MDR-TB | lineage5.1.5 | gh | ERR502508 | Pre-XDR-TB | lineage5.1.5 | gh | ERR502509 | Pre-XDR-TB | lineage5.1.5 | gh | ERR3170404 | MDR-TB | lineage5.1.1 | gh | SRR23310985 | MDR-TB | lineage4.2.1 | None | ERR702410 | HR-TB | lineage5.1.5 | gh | ERR702428 | HR-TB | lineage5.1.5 | gh | SRR5486886 | Pre-XDR-TB | lineage4.8 | None | ERR2446184 | HR-TB | lineage1.1.1.1 | nl | ERR1334051 | HR-TB | lineage5.1.5 | gh | ERR3335755 | Pre-XDR-TB | lineage3.1.3 | pk | ERR4797791 | HR-TB | lineage1.1.2 | in | ERR4798983 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR4798893 | HR-TB | lineage3 | in | ERR2843534 | HR-TB | lineage2.2.1 | None | ERR1215480 | MDR-TB | lineage5.1.5 | gh | ERR2516208 | MDR-TB | lineage4.3.3 | be | ERR4798843 | XDR-TB | lineage4.2.2.2 | in | ERR4797926 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR4828410 | HR-TB | lineage2.2.1 | None | ERR4799165 | Pre-XDR-TB | lineage3 | in | ERR2517624 | HR-TB | lineage1.1.1.1 | nl | SRR6485171 | RR-TB | lineage4.8 | None | SRR8651595 | MDR-TB | lineage2.2.1 | cn | SRR6484911 | HR-TB | lineage4.2.1 | None | ERR4800309 | XDR-TB | lineage4.2.2.2 | in | ERR4799628 | Pre-XDR-TB | lineage4.3.4.1 | in | SRR6257090 | HR-TB | lineage4.2.1 | None | ERR4830619 | MDR-TB | lineage4.2.1 | tm | ERR3077954 | MDR-TB | lineage4.2.2.2 | None | ERR3077947 | MDR-TB | lineage4.2.2.2 | None | ERR3077998 | MDR-TB | lineage4.2.2.2;lineage3.1.1 | None | ERR3077963 | MDR-TB | lineage4.2.2.2;lineage3.1.1 | None | ERR3077960 | MDR-TB | lineage4.2.2 | None | ERR3078007 | MDR-TB | lineage4.2.2.2 | None | ERR3078000 | MDR-TB | lineage4.2.2.2 | None | ERR4812187 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4831493 | Pre-XDR-TB | lineage3 | None | ERR4830722 | Pre-XDR-TB | lineage4.3.1 | dz | SRR6785182 | Other | lineage4.2.1.1 | None | ERR4830732 | MDR-TB | lineage4.3.1 | dz | ERR4872154 | Pre-XDR-TB | lineage4.6.2.2 | None | ERR5917747 | HR-TB | lineage4.2.1 | by | ERR4830672 | MDR-TB | lineage4.3.1 | dz | SRR9738489 | MDR-TB | lineage4.8 | None | ERR4830734 | MDR-TB | lineage4.3.1 | dz | ERR12117945 | MDR-TB | lineage4.3.3 | None | SRR7592387 | Pre-XDR-TB | lineage4.8 | None | SRR7652996 | MDR-TB | lineage4.2.1 | None | ERR10225516 | MDR-TB | lineage1.1.2 | None | ERR11043467 | MDR-TB | lineage4.2.1 | None | ERR11043766 | MDR-TB | lineage4 | None | ERR11043794 | MDR-TB | lineage4 | None | ERR3287521 | MDR-TB | lineage4.3.3 | None | ERR11044503 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR1215464 | HR-TB | lineage5.1.5 | None | ERR4821992 | MDR-TB | lineage1.1.2 | gb | ERR3287686 | MDR-TB | lineage4.3.3 | None | ERR3470647 | Other | lineage3 | None | ERR4553437 | MDR-TB | None | ERR3639802 | MDR-TB | lineage4.3.3 | None | ERR4596929 | MDR-TB | lineage4.2.2.2;lineage3 | None | ERR4553449 | MDR-TB | None | ERR4553772 | MDR-TB | None | ERR4596911 | MDR-TB | lineage4.2.2.2 | None | ERR4596908 | MDR-TB | lineage4.2.2.2 | None | ERR4553584 | MDR-TB | None | ERR4596921 | MDR-TB | lineage4.3.4.2.1 | None | ERR4596936 | MDR-TB | lineage4.2.2.2 | None | ERR4596941 | MDR-TB | lineage4.3.4.2.1 | None | ERR4831988 | HR-TB | lineage4.4.1.2;lineage2.2.1 | vn | ERR4832064 | HR-TB | lineage4.4.1.2 | vn | ERR2514340 | HR-TB | lineage4.3.3 | gb | ERR4832009 | HR-TB | lineage4.4.1.2 | vn | ERR5866002 | MDR-TB | lineage4.1.2.1 | None | ERR11798651 | MDR-TB | lineage4.2.1 | None | ERR4800158 | MDR-TB | lineage4.2.2.2 | None | SRR16088544 | Pre-XDR-TB | lineage4.2.1;lineage2.2.1 | None | ERR6358738 | Other | lineage4.9 | None | ERR6879030 | MDR-TB | lineage4.3.3 | None |
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