lineage | Count |
---|---|
lineage4.2.1 | 1 |
lineage4.4 | 1 |
lineage4.6.1.2 | 1 |
lineage2.2.1 | 20 |
lineage4.3.4.1 | 1 |
lineage3.1.2 | 1 |
lineage2.2.1.1 | 1 |
lineage4.2.1.1 | 1 |
lineage4.3.2 | 2 |
lineage2.2.2 | 5 |
lineage2.1 | 1 |
lineage3 | 3 |
lineage4.5 | 1 |
lineage4.3.3 | 2 |
lineage4.8 | 1 |
lineage1.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 43 |
ID | Drug resistance | Lineage | Country iso2 | SRR27332322 | HR-TB | lineage4.2.1 | None | ERR767957 | HR-TB | lineage4.4 | th | ERR6358775 | MDR-TB | lineage4.6.1.2 | None | ERR2206620 | Sensitive | lineage2.2.1 | None | SRR25515886 | MDR-TB | lineage2.2.1 | None | SRR6824557 | MDR-TB | lineage2.2.1 | cn | ERR2935859 | HR-TB | lineage4.3.4.1 | None | SRR25207158 | Pre-XDR-TB | lineage2.2.1 | None | SRR17406777 | Sensitive | lineage3.1.2 | None | SRR13232587 | Pre-XDR-TB | lineage2.2.1 | None | ERR11774983 | Sensitive | lineage2.2.1.1 | None | SRR6832548 | MDR-TB | lineage4.2.1.1 | None | SRR14164856 | Sensitive | lineage4.3.2 | None | SRR13232585 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723851 | MDR-TB | lineage2.2.1 | cn | SRR1013683 | Pre-XDR-TB | lineage2.2.2 | None | SRR10040541 | MDR-TB | lineage2.2.1 | None | SRR10809026 | MDR-TB | lineage2.1 | None | SAMN02360616 | Pre-XDR-TB | lineage2.2.2 | kr | SRR1049069 | Pre-XDR-TB | lineage2.2.2 | None | ERR8665763 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316400 | RR-TB | lineage2.2.1 | None | SRR28046175 | Sensitive | lineage3 | None | ERR13290773 | Pre-XDR-TB | lineage4.5 | None | ERR7737663 | MDR-TB | lineage2.2.1 | None | SRR23862151 | HR-TB | lineage2.2.1 | None | SRR1723660 | MDR-TB | lineage2.2.1 | cn | SRR1049068 | Pre-XDR-TB | lineage2.2.2 | None | SRR6831928 | MDR-TB | lineage4.3.3 | None | SRR25534407 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665762 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287780 | HR-TB | lineage4.8 | pe | ERR4797565 | MDR-TB | lineage1.2.2.2 | in | ERR688016 | Pre-XDR-TB | lineage3 | None | ERR1034584 | Pre-XDR-TB | lineage3 | pk | SRR24256127 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013682 | Pre-XDR-TB | lineage2.2.2 | None | SRR29538970 | Pre-XDR-TB | lineage4.3.3 | None | ERR7362018 | Pre-XDR-TB | lineage2.2.1 | None | SRR14164411 | Sensitive | lineage4.3.2 | None | SRR27069432 | MDR-TB | lineage2.2.1 | None | SRR12420705 | MDR-TB | lineage2.2.1 | None | SRR6824390 | MDR-TB | lineage2.2.1 | cn |
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