lineage | Count |
---|---|
lineage2.2.1 | 7 |
lineage4.5 | 4 |
lineage4.2.1 | 1 |
lineage4.3.3 | 6 |
lineage4.6.1.1 | 5 |
lineage1.2.1.2.1 | 1 |
lineage5.1.1 | 3 |
lineage4.2.2.2 | 1 |
lineage6.1.3 | 2 |
lineage4.1.2.1 | 3 |
lineage4.2.2 | 3 |
lineage4.1.2 | 1 |
lineage1.2.2.2;lineage4 | 1 |
lineage1.2.2.2 | 1 |
lineage4.4.1.1 | 2 |
lineage4.9.1 | 1 |
lineage4.4.2 | 1 |
spoligotype | Count |
---|---|
None | 43 |
ID | Drug resistance | Lineage | Country iso2 | SRR7516442 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125330 | MDR-TB | lineage4.5 | None | SRR12420790 | HR-TB | lineage2.2.1 | None | SRR14781993 | MDR-TB | lineage4.2.1 | None | SRR18715044 | MDR-TB | lineage4.3.3 | None | ERR4827775 | HR-TB | lineage4.5 | None | ERR1198976 | Sensitive | lineage4.6.1.1 | None | SRR18715341 | MDR-TB | lineage4.3.3 | None | SRR6930925 | MDR-TB | lineage1.2.1.2.1 | None | ERR11082881 | MDR-TB | lineage4.5 | None | ERR1198974 | Sensitive | lineage4.6.1.1 | None | ERR9121598 | HR-TB | lineage4.3.3 | None | ERR552189 | Other | lineage5.1.1 | cg | SRR26111941 | Sensitive | lineage4.2.2.2 | None | ERR552188 | Other | lineage5.1.1 | None | SAMEA3671546 | Sensitive | lineage4.6.1.1 | ug | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR16058058 | MDR-TB | lineage4.5 | None | ERR4797848 | Sensitive | lineage4.1.2.1 | in | ERR9786154 | Sensitive | lineage4.1.2.1 | None | SRR21576613 | MDR-TB | lineage4.2.2 | None | ERR1334032 | Other | lineage6.1.3 | None | SRR16088584 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR3273220 | MDR-TB | lineage4.1.2 | None | SRR12420777 | Sensitive | lineage2.2.1 | None | ERR1198975 | Sensitive | lineage4.6.1.1 | None | SRR22424871 | Sensitive | lineage1.2.2.2;lineage4 | None | ERR13261521 | Sensitive | lineage1.2.2.2 | None | SRR29539668 | MDR-TB | lineage4.3.3 | None | ERR4800664 | Sensitive | lineage4.2.2 | None | SRR671737 | MDR-TB | lineage2.2.1 | cn | SRR10040194 | MDR-TB | lineage4.2.2 | None | ERR4809153 | RR-TB | lineage4.4.1.1 | za | ERR11488432 | MDR-TB | lineage4.9.1 | None | ERR552187 | Other | lineage5.1.1 | None | ERR4195550 | HR-TB | lineage4.3.3 | None | ERR1198974_ERR1198975_ERR1198976 | Sensitive | lineage4.6.1.1 | None | SRR10305937 | Sensitive | lineage4.4.2 | None | ERR6866612 | Other | lineage4.3.3 | None | SRR12420425 | Sensitive | lineage2.2.1 | None | SRR28389835 | Sensitive | lineage4.4.1.1 | None | ERR12916925 | XDR-TB | lineage2.2.1 | None | SRR12420633 | Sensitive | lineage2.2.1 | None |
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