lineage | Count |
---|---|
lineage4.1.2.1 | 2 |
lineage4 | 8 |
lineage2.2.2 | 7 |
lineage4.5 | 5 |
lineage4.8 | 4 |
lineage3.1.1 | 1 |
lineage2.2.1 | 14 |
lineage3 | 7 |
lineage4.6.1.2 | 4 |
lineage4.3.3 | 2 |
lineage4.1.1.3 | 1 |
lineage4.6.1.1 | 1 |
lineage4.1.2.1;lineage4.3 | 1 |
lineage4.1.4 | 2 |
lineage4.1.1 | 2 |
lineage4.4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 62 |
ID | Drug resistance | Lineage | Country iso2 | SRR29274163 | MDR-TB | lineage4.1.2.1 | None | ERR3287517 | MDR-TB | lineage4 | None | SRR25207090 | Pre-XDR-TB | lineage2.2.2 | None | SRR20969675 | Other | lineage4.5 | None | SRR21690950 | HR-TB | lineage4.8 | None | ERR3287654 | Other | lineage4 | pe | ERR11067821 | MDR-TB | lineage3.1.1 | None | ERR5864516 | MDR-TB | lineage2.2.1 | None | ERR11811390 | HR-TB | lineage2.2.1 | None | ERR2307746 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173572 | MDR-TB | lineage3 | None | ERR8774328 | MDR-TB | lineage4.6.1.2 | None | SRR30182503 | Sensitive | lineage3 | None | ERR2516430 | Pre-XDR-TB | lineage4 | pe | ERR3273123 | MDR-TB | lineage2.2.1 | None | SRR12420421 | MDR-TB | lineage2.2.1 | None | SRR10305618 | Pre-XDR-TB | lineage4.5 | None | ERR4812995 | MDR-TB | lineage4.3.3 | None | SRR25207353 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173751 | MDR-TB | lineage3 | None | SRR15369073 | Sensitive | lineage2.2.1 | None | SRR28394004 | MDR-TB | lineage4 | None | ERR2516645 | Pre-XDR-TB | lineage4 | pe | ERR10748556 | MDR-TB | lineage4.1.1.3 | None | ERR2516534 | Pre-XDR-TB | lineage4 | pe | SRR28394026 | Pre-XDR-TB | lineage4 | None | SRR6824462 | Pre-XDR-TB | lineage4.5 | cn | ERR4799007 | Sensitive | lineage3 | in | SRR1166228 | MDR-TB | lineage4.8 | ro | ERR4810851 | Pre-XDR-TB | lineage2.2.2 | cn | SRR12420791 | MDR-TB | lineage2.2.1 | None | SRR16088118 | Sensitive | lineage4.3.3 | None | SAMN02628506 | MDR-TB | lineage3 | ir | SRR20969659 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043569 | Sensitive | lineage4.1.2.1 | None | ERR4796788 | MDR-TB | lineage3 | in | ERR4810477 | Pre-XDR-TB | lineage2.2.2 | cn | ERR11489020 | MDR-TB | lineage2.2.1 | None | SRR16089912 | HR-TB | lineage4.8 | None | ERR1199014 | Sensitive | lineage4.6.1.1 | ug | SRR10040549 | Pre-XDR-TB | lineage2.2.2 | None | SRR25207198 | Pre-XDR-TB | lineage2.2.2 | None | SRR10809008 | HR-TB | lineage4.1.2.1;lineage4.3 | None | ERR11488932 | MDR-TB | lineage2.2.1 | None | SRR20139558 | Pre-XDR-TB | lineage4.1.4 | None | ERR2516706 | MDR-TB | lineage4 | pe | SRR21276960 | MDR-TB | lineage2.2.1 | None | ERR2184428 | Sensitive | lineage4.1.1 | pe | ERR8774329 | MDR-TB | lineage4.6.1.2 | None | ERR4423677 | MDR-TB | lineage4.6.1.2 | None | SRR10808587 | Sensitive | lineage4.1.1 | None | SRR8651623 | MDR-TB | lineage2.2.1 | cn | ERR11811371 | HR-TB | lineage2.2.1 | None | ERR4423676 | MDR-TB | lineage4.6.1.2 | None | ERR4796828 | MDR-TB | lineage3 | in | ERR13291472 | HR-TB | lineage4.8 | None | SRR7592355 | Pre-XDR-TB | lineage4.1.4 | None | SRR12420400 | Pre-XDR-TB | lineage2.2.1 | None | ERR2179638 | Pre-XDR-TB | lineage4.5 | cn | ERR4811328 | Pre-XDR-TB | lineage2.2.2 | cn | SRR7276686 | Sensitive | lineage4.4.1.1 | None | SRR1723927 | Pre-XDR-TB | lineage4.5 | cn |
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