lineage | Count |
---|---|
lineage4.1.1 | 1 |
M.canetti;lineage2.1;lineage6.3 | 1 |
lineage4.7 | 2 |
lineage4.9 | 2 |
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
lineage4.2.1 | 1 |
lineage4.1.2.1 | 3 |
lineage2.1;lineage4.1.1.1;lineage6.3 | 1 |
lineage2.1;lineage2.2;lineage6.3 | 1 |
lineage2.2.1 | 1 |
lineage4.5;lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 15 |
ID | Drug resistance | Lineage | Country iso2 | ERR6866430 | Sensitive | lineage4.1.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR13285038 | MDR-TB | lineage4.7 | None | ERR2707150 | MDR-TB | lineage4.9 | cd | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR23311029 | MDR-TB | lineage4.2.1 | None | SRR29274024 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9738552 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR20969897 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830157 | HR-TB | lineage4.5;lineage4.8 | None | SRR29273674 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29230774 | MDR-TB | lineage4.9 | None | ERR11069020 | MDR-TB | lineage4.7 | None |
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