lineage | Count |
---|---|
lineage4.8 | 3 |
lineage4 | 42 |
lineage2.2.1 | 9 |
lineage4.9 | 2 |
lineage1.2.1.2.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.2.1 | 8 |
lineage4.4.1.2 | 1 |
lineage4.1.2.1 | 3 |
lineage4.4.2 | 2 |
lineage4.5 | 2 |
lineage2.2.2 | 1 |
lineage4.8.2 | 1 |
lineage4.2.2.1 | 1 |
lineage4.2.2.2 | 3 |
spoligotype | Count |
---|---|
None | 80 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR13285134 | MDR-TB | lineage4.8 | None |
ERR13260151 | MDR-TB | lineage4 | None |
SRR6824559 | MDR-TB | lineage2.2.1 | cn |
ERR4812883 | MDR-TB | lineage4.9 | pe |
ERR751679 | Sensitive | lineage1.2.1.2.1 | th |
ERR751411 | MDR-TB | lineage4 | pe |
ERR751356 | MDR-TB | lineage4 | pe |
ERR11049099 | MDR-TB | lineage4.1.1.3 | None |
ERR2677401 | Pre-XDR-TB | lineage4.2.1 | de |
SRR7755735 | MDR-TB | lineage4.2.1 | None |
ERR4812485 | Pre-XDR-TB | lineage4 | pe |
ERR3287536 | MDR-TB | lineage4 | None |
SRR28393369 | MDR-TB | lineage4 | None |
ERR3287443 | MDR-TB | lineage4 | pe |
ERR4813603 | MDR-TB | lineage4 | None |
ERR233382 | Sensitive | lineage4.4.1.2 | np |
ERR1034755 | MDR-TB | lineage4 | pe |
ERR13284322 | MDR-TB | lineage4 | None |
SRR23402844 | Sensitive | lineage4.1.2.1 | None |
SRR10306027 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4457924 | MDR-TB | lineage4 | None |
SRR12142343 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6824484 | XDR-TB | lineage4.4.2 | cn |
ERR11081547 | MDR-TB | lineage4.1.2.1 | None |
ERR2516458 | MDR-TB | lineage4 | pe |
ERR4811471 | Other | lineage4.5 | cn |
ERR8976092 | XDR-TB | lineage2.2.2 | None |
SRR16915706 | Sensitive | lineage4 | None |
SRR28393626 | MDR-TB | lineage4 | None |
ERR718546 | Sensitive | lineage4.5 | th |
SRR28393595 | MDR-TB | lineage2.2.1 | None |
SRR28393265 | MDR-TB | lineage4 | None |
ERR751540 | MDR-TB | lineage4 | pe |
ERR751488 | MDR-TB | lineage4 | pe |
SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6785405 | HR-TB | lineage4.2.1 | None |
SRR6484864 | Sensitive | lineage4.2.1 | None |
SRR28393689 | MDR-TB | lineage4 | None |
SRR7646073 | MDR-TB | lineage4.2.1 | None |
ERR11043237 | Pre-XDR-TB | lineage4.2.1 | None |
ERR4813115 | MDR-TB | lineage4 | None |
ERR11775682 | Sensitive | lineage4.2.1 | None |
ERR2510175 | MDR-TB | lineage4 | pe |
SRR28393848 | MDR-TB | lineage4 | None |
ERR11082091 | MDR-TB | lineage4 | None |
ERR4457925 | MDR-TB | lineage4 | None |
ERR11043528 | MDR-TB | lineage4.8 | None |
ERR2514905 | Sensitive | lineage4.8.2 | gb |
SRR25207266 | Pre-XDR-TB | lineage4.4.2 | None |
ERR3287445 | MDR-TB | lineage4 | pe |
SRR29053249 | Sensitive | lineage4 | None |
ERR13285165 | MDR-TB | lineage4.1.2.1 | None |
SRR6832203 | HR-TB | lineage2.2.1 | None |
SRR1013581 | Pre-XDR-TB | lineage2.2.1 | None |
ERR7339051 | MDR-TB | lineage4 | None |
ERR4812772 | MDR-TB | lineage4 | pe |
ERR7339052 | MDR-TB | lineage4 | None |
ERR1034737 | MDR-TB | lineage4 | pe |
SRR29274262 | MDR-TB | lineage4.2.2.1 | None |
SRR28394078 | MDR-TB | lineage4 | None |
ERR4814598 | Sensitive | lineage4.9 | gb |
ERR751521 | MDR-TB | lineage4 | pe |
ERR751478 | MDR-TB | lineage4 | pe |
ERR779923 | MDR-TB | lineage4 | pe |
ERR751465 | MDR-TB | lineage4 | pe |
ERR751531 | MDR-TB | lineage4 | pe |
ERR751526 | MDR-TB | lineage4 | pe |
ERR751452 | Pre-XDR-TB | lineage4 | pe |
SRR13870364 | Pre-XDR-TB | lineage4 | None |
ERR12549779 | Sensitive | lineage4.8 | None |
ERR2513956 | Sensitive | lineage4.2.2.2 | gb |
SRR19315451 | Sensitive | lineage4 | None |
SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3287527 | MDR-TB | lineage4 | None |
ERR13267579 | Pre-XDR-TB | lineage4.2.1 | None |
ERR7737871 | MDR-TB | lineage4.2.2.2 | None |
ERR3287696 | MDR-TB | lineage4 | pe |
ERR4457843 | MDR-TB | lineage4 | None |
SRR1723568 | MDR-TB | lineage2.2.1 | cn |
SRR29230966 | Sensitive | lineage4.2.2.2 | None |