Rv1173 - c.1143C>T
Drug resistance types
4 Sensitive
1 RR-TB
14 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 24 |
| M.canetti;lineage1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| lineage1.2.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 33 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02381032 | HR-TB | lineage2.2.1 | ug | SRR1140676 | HR-TB | lineage2.2.1 | None | SRR6797688 | Other | lineage2.2.1 | None | SRR1049712 | HR-TB | lineage2.2.1 | None | ERR4830768 | HR-TB | lineage2.2.1 | ir | ERR4800706 | HR-TB | lineage2.2.1 | None | SRR10147696 | HR-TB | lineage2.2.1 | None | SRR6797687 | Other | lineage2.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR4830996 | Pre-XDR-TB | lineage2.2.1 | np | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR28045009 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044975 | Sensitive | lineage2.2.1 | None | ERR4830011 | HR-TB | lineage2.2.1 | ng | SRR3675545 | RR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4797841 | HR-TB | lineage2.2.1 | None | ERR4816022 | HR-TB | lineage2.2.1 | None | ERR4818018 | HR-TB | lineage2.2.1 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4553552 | MDR-TB | lineage2.2.1 | None | SRR1062922 | HR-TB | lineage2.2.1 | None | ERR4815928 | HR-TB | lineage2.2.1 | gb | SRR6797826 | Sensitive | lineage2.2.1 | None | ERR4796725 | MDR-TB | lineage1.2.2.2 | in | SRR19324817 | Sensitive | lineage2.2.1 | None | SRR23901993 | HR-TB | lineage2.2.1 | None | ERR4553536 | MDR-TB | lineage2.2.1 | None | SRR1049713 | HR-TB | lineage2.2.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6797618 | Sensitive | lineage2.2.1 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
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