Rv1173 - c.1323G>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
2 Sensitive
1 RR-TB
3 HR-TB
81 MDR-TB
50 Pre-XDR-TB
1 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 124 |
| lineage2.2;lineage4.2.1 | 1 |
| lineage4.3.1 | 5 |
| lineage2.2.1;lineage4.2.1 | 6 |
| lineage4.1.2.1;lineage4.2.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 138 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816369 | Pre-XDR-TB | lineage4.2.1 | gb | SRR7645933 | MDR-TB | lineage4.2.1 | None | SRR5153888 | MDR-TB | lineage4.2.1 | None | SRR7646033 | MDR-TB | lineage4.2.1 | None | ERR403277 | MDR-TB | lineage2.2;lineage4.2.1 | None | ERR10762289 | MDR-TB | lineage4.2.1 | None | SRR10525354 | Pre-XDR-TB | lineage4.2.1 | None | SRR10525365 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273653 | Pre-XDR-TB | lineage4.2.1 | None | ERR11798653 | MDR-TB | lineage4.2.1 | None | SRR29274171 | Pre-XDR-TB | lineage4.2.1 | None | SRR10380122 | MDR-TB | lineage4.2.1 | None | ERR13291231 | Pre-XDR-TB | lineage4.2.1 | None | SRR6832514 | HR-TB | lineage4.2.1 | None | SRR14782342 | MDR-TB | lineage4.2.1 | None | ERR10762298 | MDR-TB | lineage4.2.1 | None | SRR6832296 | HR-TB | lineage4.2.1 | None | SRR10379889 | MDR-TB | lineage4.2.1 | None | SRR29273753 | Pre-XDR-TB | lineage4.2.1 | None | SRR29126671 | Sensitive | lineage4.3.1 | None | SRR29273894 | Pre-XDR-TB | lineage4.2.1 | None | ERR10762238 | MDR-TB | lineage4.2.1 | None | SRR5153855 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR4872273 | MDR-TB | lineage4.2.1 | None | SRR29273993 | Pre-XDR-TB | lineage4.2.1 | None | SRR14801995 | MDR-TB | lineage4.2.1 | None | SAMN02584622 | MDR-TB | lineage4.2.1 | md | SAMN02584631 | MDR-TB | lineage4.2.1 | md | ERR7910962 | MDR-TB | lineage4.2.1 | md | ERR7910980 | MDR-TB | lineage4.2.1 | md | SRR1166201 | MDR-TB | lineage4.2.1 | None | ERR8665591 | MDR-TB | lineage4.2.1 | None | SRR28498548 | MDR-TB | lineage4.2.1 | None | ERR5865773 | MDR-TB | lineage4.2.1 | None | SRR14782159 | RR-TB | lineage2.2.1;lineage4.2.1 | None | SRR6511612 | MDR-TB | lineage4.2.1 | None | ERR137271 | MDR-TB | lineage2.2.1;lineage4.2.1 | ru | ERR229953 | MDR-TB | lineage4.2.1 | ru | ERR067615 | Pre-XDR-TB | lineage4.2.1 | ru | ERR137274 | MDR-TB | lineage4.2.1 | ru | ERR108485 | MDR-TB | lineage4.2.1 | ru | ERR067577 | MDR-TB | lineage4.2.1 | ru | ERR067691 | MDR-TB | lineage4.2.1 | ru | ERR133834 | MDR-TB | lineage4.2.1 | ru | ERR229988 | MDR-TB | lineage2.2.1;lineage4.2.1 | ru | ERR067728 | MDR-TB | lineage4.2.1 | ru | ERR133849 | MDR-TB | lineage4.2.1 | ru | ERR067733 | MDR-TB | lineage4.2.1 | ru | ERR108425 | MDR-TB | lineage4.2.1 | ru | ERR067609 | MDR-TB | lineage4.2.1 | ru | ERR234654 | MDR-TB | lineage4.2.1 | ru | ERR2516995 | Pre-XDR-TB | lineage4.2.1 | gb | ERR2516351 | MDR-TB | lineage4.3.1 | be | ERR4815445 | Pre-XDR-TB | lineage4.2.1 | gb | SRR1168978 | MDR-TB | lineage4.2.1 | None | SRR6807675 | MDR-TB | lineage4.2.1 | None | SRR7592372 | Pre-XDR-TB | lineage4.2.1 | None | SRR14782381 | HR-TB | lineage4.2.1 | None | ERR13285793 | MDR-TB | lineage4.2.1 | None | ERR7975645 | MDR-TB | lineage4.3.1 | None | ERR5865774 | MDR-TB | lineage4.2.1 | None | ERR5865989 | MDR-TB | lineage4.2.1 | None | ERR11798654 | MDR-TB | lineage4.2.1 | None | ERR5866072 | MDR-TB | lineage4.2.1 | None | SRR14802222 | Pre-XDR-TB | lineage4.2.1 | None | ERR11798655 | MDR-TB | lineage4.2.1 | None | SRR6256976 | Pre-XDR-TB | lineage4.2.1 | ru | SRR10379890 | MDR-TB | lineage4.2.1 | None | ERR4407516 | Sensitive | lineage4.3.1 | None | ERR11043925 | Pre-XDR-TB | lineage4.2.1 | None | ERR13291384 | Pre-XDR-TB | lineage4.2.1 | None | ERR13285729 | Pre-XDR-TB | lineage4.2.1 | None | ERR13276161 | Pre-XDR-TB | lineage4.2.1 | None | SRR998857 | Pre-XDR-TB | lineage4.2.1 | None | SRR7592352 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273841 | Pre-XDR-TB | lineage4.2.1 | None | SRR7592337 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273986 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273945 | Pre-XDR-TB | lineage4.2.1 | None | SRR29274158 | Pre-XDR-TB | lineage4.2.1 | None | ERR11798652 | MDR-TB | lineage4.2.1 | None | SRR10525341 | Pre-XDR-TB | lineage4.2.1 | None | SRR16089533 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273755 | Pre-XDR-TB | lineage4.2.1 | None | ERR229974 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR13285833 | MDR-TB | lineage4.2.1 | None | SRR29539548 | Pre-XDR-TB | lineage4.2.1 | None | ERR13284144 | MDR-TB | lineage4.2.1 | None | SRR29273947 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273625 | MDR-TB | lineage4.2.1 | None | SRR29273990 | Pre-XDR-TB | lineage4.2.1 | None | SRR23310997 | MDR-TB | lineage4.2.1 | None | SRR1169016 | MDR-TB | lineage4.2.1 | None | ERR13285803 | MDR-TB | lineage4.2.1 | None | SRR29274169 | Pre-XDR-TB | lineage4.2.1 | None | SRR1166144 | MDR-TB | lineage4.2.1 | None | ERR2864242 | MDR-TB | lineage4.2.1 | pt | ERR10762242 | Pre-XDR-TB | lineage4.2.1 | None | SRR28646090 | XDR-TB | lineage4.2.1 | None | ERR7911270 | MDR-TB | lineage4.2.1 | md | SRR28351409 | MDR-TB | lineage4.2.1 | None | ERR7911047 | Pre-XDR-TB | lineage4.2.1 | md | ERR7910894 | MDR-TB | lineage4.2.1 | md | SRR24827269 | Pre-XDR-TB | lineage4.2.1 | None | SRR28351522 | MDR-TB | lineage4.2.1 | None | SRR7592385 | Pre-XDR-TB | lineage4.2.1 | None | SRR16088478 | MDR-TB | lineage4.2.1 | None | SRR29274170 | Pre-XDR-TB | lineage4.2.1 | None | ERR10762441 | Pre-XDR-TB | lineage4.2.1 | None | ERR13285726 | MDR-TB | lineage4.2.1 | None | SRR29052887 | Pre-XDR-TB | lineage4.2.1 | None | ERR3639765 | MDR-TB | lineage4.2.1 | None | ERR13106399 | MDR-TB | lineage4.2.1 | None | SRR6807700 | Pre-XDR-TB | lineage4.2.1 | None | SRR10525350 | Pre-XDR-TB | lineage4.2.1 | None | SRR29273667 | MDR-TB | lineage4.2.1 | None | ERR11081873 | MDR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR21677637 | Pre-XDR-TB | lineage4.2.1 | None | ERR5866008 | MDR-TB | lineage4.2.1 | None | ERR5866071 | MDR-TB | lineage4.2.1 | None | SRR5153230 | MDR-TB | lineage4.2.1 | None | ERR13285826 | MDR-TB | lineage4.2.1 | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | ERR13284801 | MDR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR29273950 | Pre-XDR-TB | lineage4.2.1 | None | ERR3794362 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR12031346 | MDR-TB | lineage4.3.1 | None | SRR28646054 | Pre-XDR-TB | lineage4.2.1 | None | ERR4829708 | MDR-TB | lineage4.2.1 | it | SRR3743377 | Pre-XDR-TB | lineage4.2.1 | None | SRR14782749 | MDR-TB | lineage4.2.1 | None | SRR28498407 | MDR-TB | lineage4.2.1 | None | ERR13292534 | Pre-XDR-TB | lineage4.2.1 | None | SRR23310913 | MDR-TB | lineage4.2.1 | None | ERR10762491 | MDR-TB | lineage4.2.1 | None | SRR10379983 | Pre-XDR-TB | lineage4.2.1 | None | ERR11080889 | MDR-TB | lineage4.2.1 | None | SRR10380121 | MDR-TB | lineage4.2.1 | None |
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