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SRA data
Rv1173
- c.1959G>A
Drug resistance types
1 Sensitive
0 RR-TB
6 HR-TB
9 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.9
11
M.canetti;lineage2.1;lineage4.9;lineage6.3
2
lineage2.1;lineage2.2;lineage6.3
1
lineage4.9
1
lineage2.1;lineage4.9
1
lineage1.2.1.2.1
1
La1.8.1
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
18
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR3468544
Other
lineage2.1;lineage4.9
None
ERR3468607
Other
lineage4.9
None
ERR3797016
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR3797023
HR-TB
La1.8.1
None
ERR4188342
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR4188350
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR5311078
MDR-TB
M.canetti;lineage2.1;lineage4.9;lineage6.3
None
ERR5311081
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR5311083
HR-TB
M.canetti;lineage2.1;lineage4.9
None
Showing 1 to 10 of 18 entries
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