Rv1173 - c.396C>T
Drug resistance types
84 Sensitive
1 RR-TB
21 HR-TB
21 MDR-TB
43 Pre-XDR-TB
6 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 152 |
| lineage4.3.2 | 23 |
| lineage2.2.1;lineage3 | 2 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage1.2.1.2.1;lineage2.2.1 | 1 |
| lineage1.1.1.1;lineage2.2.1 | 1 |
| lineage2.2.1;lineage4.5 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage2.2.1;lineage3;lineage4.1.1.3;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 187 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5073563 | Sensitive | lineage2.2.1 | vn | ERR4797510 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798666 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799148 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797975 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798249 | Pre-XDR-TB | lineage2.2.1 | in | ERR9119252 | Sensitive | lineage2.2.1 | None | SRR21689860 | Sensitive | lineage4.3.2 | None | ERR4195332 | Sensitive | lineage4.3.2 | None | SRR27450360 | Sensitive | lineage2.2.1 | None | ERR4799299 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798997 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285624 | HR-TB | lineage2.2.1 | None | ERR4796509 | Pre-XDR-TB | lineage2.2.1 | in | ERR9892007 | Sensitive | lineage2.2.1 | None | SRR21689876 | Sensitive | lineage4.3.2 | None | SRR5067570 | Sensitive | lineage2.2.1 | vn | SRR26399635 | Sensitive | lineage2.2.1 | None | SRR25827543 | XDR-TB | lineage2.2.1;lineage3 | None | ERR9119279 | HR-TB | lineage2.2.1 | None | ERR13267119 | HR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR13266119 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266691 | Pre-XDR-TB | lineage2.2.1 | None | SRR5073961 | Other | lineage2.2.1 | vn | SRR26399937 | HR-TB | lineage2.2.1 | None | SRR21690960 | Sensitive | lineage4.3.2 | None | SRR26399492 | Other | lineage2.2.1 | None | SRR30333232 | Sensitive | lineage2.2.1 | None | ERR13262066 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732939 | Sensitive | lineage2.2.1 | None | ERR13260028 | MDR-TB | lineage2.2.1 | None | ERR4799472 | Pre-XDR-TB | lineage2.2.1 | in | SRR5073568 | HR-TB | lineage2.2.1 | vn | ERR13266634 | Other | lineage2.2.1 | None | ERR13261201 | MDR-TB | lineage2.2.1 | None | ERR9121157 | Sensitive | lineage4.3.2 | None | ERR4831225 | Sensitive | lineage2.2.1 | de | SRR26399758 | Other | lineage2.2.1 | None | ERR4797967 | MDR-TB | lineage2.2.1 | in | ERR4798760 | Pre-XDR-TB | lineage2.2.1 | in | ERR13291330 | Sensitive | lineage2.2.1 | None | SRR26399743 | HR-TB | lineage2.2.1 | None | SRR5074148 | Sensitive | lineage2.2.1 | vn | SRR26399241 | Sensitive | lineage1.2.1.2.1;lineage2.2.1 | None | SRR21690984 | Sensitive | lineage4.3.2 | None | SRR28351186 | Pre-XDR-TB | lineage2.2.1 | None | DRR261180 | Sensitive | lineage2.2.1 | None | SRR5073917 | Other | lineage2.2.1 | vn | ERR2843528 | Sensitive | lineage2.2.1 | None | SRR28044618 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737809 | MDR-TB | lineage2.2.1 | None | ERR4831327 | Sensitive | lineage4.3.2 | de | ERR4799519 | Pre-XDR-TB | lineage2.2.1 | in | SRR5065470 | RR-TB | lineage2.2.1 | vn | ERR4831826 | MDR-TB | lineage2.2.1 | vn | ERR4831866 | MDR-TB | lineage2.2.1 | vn | ERR4830375 | Sensitive | lineage2.2.1 | vn | ERR4830359 | Other | lineage1.1.1.1;lineage2.2.1 | vn | ERR4830333 | Sensitive | lineage2.2.1 | vn | ERR4828421 | Sensitive | lineage2.2.1 | vn | ERR4828429 | Sensitive | lineage2.2.1;lineage4.5 | vn | SRR5073828 | Sensitive | lineage2.2.1 | vn | SRR1735588 | Sensitive | lineage2.2.1 | None | ERR13266989 | MDR-TB | lineage2.2.1 | None | ERR4797438 | Pre-XDR-TB | lineage2.2.1 | in | SRR21690110 | Sensitive | lineage4.3.2 | None | SRR5067340 | HR-TB | lineage2.2.1 | vn | ERR11068598 | Sensitive | lineage2.2.1 | None | SRR29050775 | Sensitive | lineage2.2.1 | None | SRR21677059 | Sensitive | lineage2.2.1 | None | SRR21691112 | Sensitive | lineage4.3.2 | None | SRR5067478 | Sensitive | lineage2.2.1 | vn | ERR4799440 | Pre-XDR-TB | lineage2.2.1 | in | SRR5065669 | Sensitive | lineage2.2.1 | vn | SRR26399220 | Sensitive | lineage2.2.1 | None | SRR26400051 | Sensitive | lineage2.2.1 | None | ERR4796389 | Pre-XDR-TB | lineage2.2.1 | in | SRR26399909 | Sensitive | lineage2.2.1 | None | ERR3275844 | Sensitive | lineage4.3.2 | nl | ERR4798274 | Pre-XDR-TB | lineage2.2.1 | in | SRR5067462 | HR-TB | lineage2.2.1 | vn | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4797580 | Pre-XDR-TB | lineage2.2.1 | in | SRR27450438 | Other | lineage2.2.1 | None | SRR5073935 | MDR-TB | lineage2.2.1 | vn | SRR25827747 | XDR-TB | lineage2.2.1;lineage3.1.2 | None | SRR22251066 | HR-TB | lineage2.2.1 | None | SRR8217905 | Sensitive | lineage2.2.1 | None | ERR4799083 | MDR-TB | lineage2.2.1 | in | ERR13266659 | Pre-XDR-TB | lineage2.2.1 | None | ERR2503439 | Sensitive | lineage2.2.1 | fi | ERR3275740 | Sensitive | lineage4.3.2 | nl | SRR8217888 | Sensitive | lineage2.2.1 | None | ERR4797898 | XDR-TB | lineage2.2.1 | in | ERR4828642 | HR-TB | lineage2.2.1 | None | SRR5065221 | Sensitive | lineage2.2.1 | vn | SRR24083705 | Sensitive | lineage2.2.1 | None | ERR13267033 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261465 | Pre-XDR-TB | lineage2.2.1 | None | ERR9121200 | Sensitive | lineage4.3.2 | None | SRR5067502 | Other | lineage2.2.1 | vn | DRR184897 | Sensitive | lineage2.2.1 | vn | ERR9119426 | Sensitive | lineage2.2.1 | None | SRR29230860 | Sensitive | lineage2.2.1 | None | SRR22249833 | Other | lineage2.2.1 | None | ERR13262158 | Pre-XDR-TB | lineage2.2.1 | None | SRR5067439 | MDR-TB | lineage2.2.1 | vn | SRR21689991 | Sensitive | lineage4.3.2 | None | SRR25827791 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175245 | Pre-XDR-TB | lineage2.2.1 | None | SRR21690746 | Sensitive | lineage4.3.2 | None | ERR4816381 | HR-TB | lineage2.2.1 | gb | ERR4819443 | Sensitive | lineage4.3.2 | gb | ERR4830420 | Sensitive | lineage2.2.1 | vn | SRR5067251 | HR-TB | lineage2.2.1 | vn | ERR4799011 | MDR-TB | lineage2.2.1 | in | ERR4796690 | Pre-XDR-TB | lineage2.2.1 | in | SRR5065321 | Sensitive | lineage2.2.1 | None | SRR26399173 | HR-TB | lineage2.2.1 | None | ERR9119200 | Sensitive | lineage2.2.1 | None | SRR24083658 | Sensitive | lineage2.2.1 | None | SRR5065434 | Sensitive | lineage2.2.1 | vn | ERR11067609 | Sensitive | lineage4.3.2 | None | ERR3275862 | Sensitive | lineage4.3.2 | nl | ERR13266394 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800497 | Pre-XDR-TB | lineage2.2.1 | in | ERR13278956 | MDR-TB | lineage2.2.1 | None | SRR5073878 | Sensitive | lineage2.2.1 | vn | SRR5073712 | Sensitive | lineage2.2.1 | vn | SRR22175213 | XDR-TB | lineage2.2.1 | None | DRR261189 | Sensitive | lineage2.2.1 | None | ERR11043130 | MDR-TB | lineage2.2.1 | None | SRR21689898 | Sensitive | lineage4.3.2 | None | ERR4195693 | Sensitive | lineage4.3.2 | None | SRR5067686 | HR-TB | lineage2.2.1 | vn | ERR1035098 | Pre-XDR-TB | lineage2.2.1 | vn | SRR29051432 | HR-TB | lineage2.2.1 | None | ERR13266696 | Pre-XDR-TB | lineage2.2.1 | None | SRR5067706 | Sensitive | lineage2.2.1 | vn | ERR11044961 | Sensitive | lineage2.2.1 | None | SRR26399154 | Sensitive | lineage2.2.1 | None | ERR13260967 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266079 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798368 | Pre-XDR-TB | lineage2.2.1 | in | DRR184979 | Sensitive | lineage2.2.1 | vn | SRR30146986 | Sensitive | lineage2.2.1 | None | SRR25827503 | Pre-XDR-TB | lineage2.2.1 | None | SRR21690841 | Sensitive | lineage4.3.2 | None | ERR13266671 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800282 | Pre-XDR-TB | lineage2.2.1 | in | SRR5067316 | Sensitive | lineage2.2.1 | vn | SRR26399868 | Sensitive | lineage2.2.1 | None | SRR29050728 | Sensitive | lineage2.2.1;lineage4.5 | None | ERR13290874 | Pre-XDR-TB | lineage2.2.1 | None | SRR24083633 | Sensitive | lineage2.2.1 | None | SRR25827780 | XDR-TB | lineage2.2.1;lineage4.8 | None | SRR24083661 | Sensitive | lineage2.2.1 | None | SRR5073976 | Sensitive | lineage2.2.1 | vn | SRR5067595 | HR-TB | lineage2.2.1 | vn | SRR25827790 | XDR-TB | lineage2.2.1;lineage3 | None | SRR26399345 | Other | lineage2.2.1 | None | SRR26399864 | Other | lineage2.2.1 | None | ERR13290862 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267118 | Pre-XDR-TB | lineage2.2.1 | None | SRR21689933 | HR-TB | lineage2.2.1 | None | SRR26399787 | Sensitive | lineage2.2.1 | None | SRR1735586 | Sensitive | lineage2.2.1 | None | SRR5065530 | Sensitive | lineage2.2.1 | vn | DRR261182 | Sensitive | lineage2.2.1 | None | ERR13285422 | Sensitive | lineage4.3.2 | None | ERR4798355 | MDR-TB | lineage2.2.1 | in | ERR4798816 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4.1.1.3;lineage4.9 | in | SRR26399426 | Sensitive | lineage2.2.1 | None | ERR3275957 | Sensitive | lineage4.3.2 | nl | ERR3276157 | Sensitive | lineage4.3.2 | nl | ERR7911508 | MDR-TB | lineage2.2.1 | vn | ERR7911516 | MDR-TB | lineage2.2.1 | vn | ERR4798033 | MDR-TB | lineage2.2.1 | in | SRR5065512 | Sensitive | lineage2.2.1 | vn | SRR5073638 | HR-TB | lineage2.2.1 | vn | SRR25827430 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR4831768 | HR-TB | lineage2.2.1 | vn | ERR4831750 | HR-TB | lineage2.2.1 | vn | ERR4831764 | MDR-TB | lineage2.2.1 | vn | ERR4831984 | MDR-TB | lineage2.2.1 | vn | ERR4831771 | MDR-TB | lineage2.2.1 | vn | ERR4830284 | HR-TB | lineage2.2.1 | vn |
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