TB-Profiler
Home
Upload
SRA data
Rv1173
- c.516C>G
Drug resistance types
3 Sensitive
0 RR-TB
2 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage2.2.1
3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
2
lineage2.1;lineage4.9
1
lineage4.8
1
M.canetti;lineage4.9;lineage9
1
La1.7.X-unk4;lineage4.9
1
Showing 1 to 6 of 6 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
9
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR133835
HR-TB
lineage4.8
ru
ERR234102
Sensitive
lineage2.2.1
cn
SRR15723148
Sensitive
lineage2.2.1
None
SRR15723168
Sensitive
lineage2.2.1
None
SRR3675520
Other
La1.7.X-unk4;lineage4.9
None
SRR6046362
MDR-TB
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
None
SRR6046460
MDR-TB
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
None
Showing 1 to 9 of 9 entries
Previous
1
Next