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SRA data
Rv1221
- c.342G>A
Drug resistance types
2 Sensitive
0 RR-TB
0 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
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lineage
Count
lineage
Count
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
2
lineage4.3.4.2
2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
lineage2.2.1.1
1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
1
La1.6;La3;M.canetti;lineage4.2;lineage4.9
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
9
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1679651
Sensitive
lineage4.3.4.2
ng
ERR4798406
MDR-TB
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
None
ERR4831417
Sensitive
lineage4.3.4.2
de
ERR5311079
Other
La1.6;La3;M.canetti;lineage4.2;lineage4.9
None
ERR5311091
Other
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
None
SRR28389873
Other
lineage2.2.1.1
None
SRR6046362
MDR-TB
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
None
SRR6046460
MDR-TB
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
None
SRR6046482
Other
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
None
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