Rv1484 - c.-100C>A
Drug resistance types
15 Sensitive
1 RR-TB
4 HR-TB
30 MDR-TB
25 Pre-XDR-TB
6 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1.1 | 11 |
| lineage4.3.4.2.1 | 4 |
| lineage4.1.3 | 8 |
| lineage2.2.1 | 25 |
| lineage4.2.1 | 5 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.3.1 | 1 |
| lineage4.1 | 1 |
| lineage3.1.2 | 3 |
| lineage1.1 | 1 |
| lineage3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage6.3.1;lineage4.1.3 | 1 |
| lineage4.3.3;lineage4.2.1.1 | 1 |
| lineage4.1.4 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.8 | 7 |
| lineage4 | 2 |
| lineage2.2.2 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 82 |
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2516811 | MDR-TB | lineage4.2.1.1 | gb | ERR2707190 | MDR-TB | lineage4.3.4.2.1 | cd | SRR23340031 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR5535687 | MDR-TB | lineage4.1.3 | None | SRR23340038 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR23340030 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR7657754 | Pre-XDR-TB | lineage2.2.1 | None | SRR23340060 | MDR-TB | lineage4.2.1.1 | None | SRR23340066 | MDR-TB | lineage4.2.1.1 | None | SRR23340068 | MDR-TB | lineage4.2.1.1 | None | SRR6832382 | HR-TB | lineage4.2.1 | None | ERR11067358 | Sensitive | lineage1.1.3.1 | None | ERR3132175 | Pre-XDR-TB | lineage2.2.1 | None | ERR3132179 | Pre-XDR-TB | lineage2.2.1 | None | SRR7517690 | XDR-TB | lineage2.2.1 | None | SRR7517820 | XDR-TB | lineage2.2.1 | None | SRR998829 | MDR-TB | lineage4.1.3 | None | ERR4822349 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4822370 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR3014618 | MDR-TB | lineage4.3.1 | tn | SRR998830 | MDR-TB | lineage4.1.3 | None | SRR998850 | MDR-TB | lineage4.1.3 | None | SRR998849 | MDR-TB | lineage4.1.3 | None | SRR998851 | MDR-TB | lineage4.1 | None | SRR998852 | MDR-TB | lineage4.1.3 | None | ERR4797228 | Pre-XDR-TB | lineage2.2.1 | in | DRR130084 | Pre-XDR-TB | lineage2.2.1.1 | None | DRR130147 | RR-TB | lineage2.2.1 | None | ERR144609 | Sensitive | lineage2.2.1 | ru | DRR130086 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11044238 | Pre-XDR-TB | lineage4.2.1 | None | ERR4423738 | MDR-TB | lineage4.3.4.2.1 | None | ERR4796672 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797037 | Pre-XDR-TB | lineage3.1.2 | None | ERR4798032 | Pre-XDR-TB | lineage3.1.2 | in | ERR5917752 | MDR-TB | lineage4.2.1.1 | by | ERR4799756 | MDR-TB | lineage3.1.2 | in | ERR4800480 | Pre-XDR-TB | lineage2.2.1 | in | ERR789236 | XDR-TB | lineage2.2.1 | None | ERR768038 | Sensitive | lineage1.1 | th | ERR789239 | Pre-XDR-TB | lineage2.2.1 | None | ERR789238 | XDR-TB | lineage2.2.1 | None | ERR789237 | Pre-XDR-TB | lineage2.2.1 | None | ERR789235 | XDR-TB | lineage2.2.1 | None | ERR789234 | XDR-TB | lineage2.2.1 | None | ERR8774435 | MDR-TB | lineage4.3.4.2.1 | None | ERR8665966 | MDR-TB | lineage4.2.1.1 | None | ERR8665965 | MDR-TB | lineage4.2.1.1 | None | ERR8773609 | MDR-TB | lineage2.2.1 | None | ERR8773611 | MDR-TB | lineage2.2.1 | None | SRR12882611 | HR-TB | lineage3 | None | ERR8975904 | Sensitive | lineage4.1.1.3 | None | SRR1049976 | MDR-TB | lineage4.1.3 | None | SRR1049962 | Sensitive | lineage6.3.1;lineage4.1.3 | None | SRR13180240 | MDR-TB | lineage2.2.1 | None | SRR13232729 | MDR-TB | lineage4.3.3;lineage4.2.1.1 | None | SRR14801698 | HR-TB | lineage4.2.1 | None | SRR13870409 | Pre-XDR-TB | lineage4.1.4 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR15369027 | Pre-XDR-TB | lineage2.2.1 | None | SRR18911992 | Sensitive | lineage1.2.2.2 | None | SRR16115883 | Sensitive | lineage1.2.2.2 | None | SRR22424759 | Pre-XDR-TB | lineage2.2.1 | None | SRR21747027 | Pre-XDR-TB | lineage2.2.1 | None | ERR7363110 | Sensitive | lineage4.8 | None | ERR11068896 | Pre-XDR-TB | lineage2.2.1 | None | ERR11080875 | MDR-TB | lineage4.2.1.1 | None | SRR23862123 | Other | lineage4 | None | ERR8025719 | Pre-XDR-TB | lineage2.2.2 | None | ERR4814072 | Sensitive | lineage4 | None | ERR4813908 | Sensitive | lineage4.8 | br | ERR4813795 | Sensitive | lineage4.8 | br | ERR1465811 | HR-TB | lineage4.1.2.1 | co | ERR4813918 | Sensitive | lineage4.8 | br | ERR4814028 | Sensitive | lineage4.8 | br | SRR3724998 | MDR-TB | lineage4.1.3 | ci | ERR4814108 | Sensitive | lineage4.8 | br | SRR3724799 | MDR-TB | lineage4.3.4.2.1 | cd | ERR2229284 | Sensitive | lineage4.8 | None | ERR4820269 | MDR-TB | lineage4.2.1 | gb | SRR5341292 | Pre-XDR-TB | lineage2.2.1 | in | ERR2516744 | MDR-TB | lineage4.2.1 | gb |
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