Rv1484 - c.-100C>A
Drug resistance types
42 Sensitive
3 RR-TB
39 HR-TB
46 MDR-TB
37 Pre-XDR-TB
8 XDR-TB
3 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.3 | 8 |
| lineage2.2.1 | 39 |
| lineage4.1.2;lineage4.2;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.2.1 | 21 |
| lineage4.2.1.1 | 12 |
| lineage4.2.1 | 8 |
| lineage2.2.1.1 | 9 |
| lineage4.2.1.1;lineage4.3.3 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage4.1.2.1;lineage4.2.1;lineage4.9 | 18 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.1.2.1;lineage4.2;lineage4.9 | 4 |
| lineage4.8 | 8 |
| lineage3 | 1 |
| lineage4.1.2.1;lineage4.2 | 5 |
| lineage4.1.4 | 2 |
| lineage3.1.2 | 5 |
| lineage4.1.2;lineage4.2.1;lineage4.9 | 8 |
| lineage4.1.2.1 | 8 |
| lineage4.3.3 | 1 |
| lineage4.3.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1;lineage4.2.1;lineage4.9 | 1 |
| lineage4.1.2;lineage4.2.1 | 1 |
| lineage4.1.1.3;lineage4.1.2.1 | 1 |
| lineage1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 178 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1049976 | MDR-TB | lineage4.1.3 | None | ERR144609 | Sensitive | lineage2.2.1 | ru | SRR1214558 | Sensitive | lineage4.1.2;lineage4.2;lineage4.9 | None | SRR1220961 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | ERR5917752 | MDR-TB | lineage4.2.1.1 | by | ERR4820269 | MDR-TB | lineage4.2.1 | gb | ERR13258004 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1214598 | Sensitive | lineage4.1.2.1;lineage4.2.1 | None | SRR13232729 | MDR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR8774435 | MDR-TB | lineage4.3.4.2.1 | None | ERR789237 | Pre-XDR-TB | lineage2.2.1 | None | ERR789235 | XDR-TB | lineage2.2.1 | None | SRR1218484 | Sensitive | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR1219270 | Sensitive | lineage4.1.2.1;lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18911992 | Sensitive | lineage1.2.2.2 | None | ERR4822370 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1233653 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR1222231 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR1223039 | Sensitive | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR1223380 | Sensitive | lineage4.1.2.1;lineage4.2.1 | None | SRR17658004 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822349 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR998830 | MDR-TB | lineage4.1.3 | None | SRR1218875 | HR-TB | lineage4.1.2.1;lineage4.2;lineage4.9 | None | SRR6832382 | HR-TB | lineage4.2.1 | None | ERR13276226 | Pre-XDR-TB | lineage4.2.1 | None | SRR1231689 | Sensitive | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | ERR2516811 | MDR-TB | lineage4.2.1.1 | gb | ERR13258513 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR16115883 | Other | lineage1.2.2.2 | None | ERR8773611 | MDR-TB | lineage2.2.1 | None | SRR23862123 | Other | lineage4.8 | None | SRR12420513 | RR-TB | lineage2.2.1 | None | SRR7517690 | XDR-TB | lineage2.2.1 | None | ERR978257 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093124 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR8773609 | MDR-TB | lineage2.2.1 | None | SRR1228489 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR12882611 | HR-TB | lineage3 | None | SRR21747027 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424759 | Pre-XDR-TB | lineage2.2.1 | None | SRR1215725 | HR-TB | lineage4.1.2.1;lineage4.2 | None | ERR13194038 | MDR-TB | lineage2.2.1.1 | None | ERR13290787 | Pre-XDR-TB | lineage2.2.1 | None | SRR998850 | MDR-TB | lineage4.1.3 | None | SRR13870409 | Pre-XDR-TB | lineage4.1.4 | None | ERR4813795 | Sensitive | lineage4.8 | br | ERR4796672 | Pre-XDR-TB | lineage2.2.1 | in | ERR13262152 | HR-TB | lineage3.1.2 | None | ERR13258454 | RR-TB | lineage2.2.1 | None | SRR1220107 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR12420414 | Sensitive | lineage2.2.1 | None | SRR1224855 | HR-TB | lineage4.1.2.1;lineage4.2;lineage4.9 | None | SRR1221524 | Sensitive | lineage4.1.2;lineage4.2.1;lineage4.9 | None | SRR1215865 | Sensitive | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR1219178 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR1228639 | Sensitive | lineage4.1.2;lineage4.2.1;lineage4.9 | None | ERR13284443 | MDR-TB | lineage4.2.1.1 | None | SRR1222721 | HR-TB | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR28394038 | MDR-TB | lineage4.1.2.1 | None | SRR28393960 | MDR-TB | lineage4.1.2.1 | None | SRR28393961 | MDR-TB | lineage4.1.2.1 | None | SRR1218737 | HR-TB | lineage4.1.2.1;lineage4.2 | None | SRR28393655 | MDR-TB | lineage4.1.2.1 | None | SRR998851 | MDR-TB | lineage4.1.3 | None | SRR1222234 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR1223101 | HR-TB | lineage4.1.2.1;lineage4.2 | None | SRR1223327 | Sensitive | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR1222355 | Sensitive | lineage4.1.2;lineage4.2.1;lineage4.9 | None | SRR1230845 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | ERR2516744 | MDR-TB | lineage4.2.1 | gb | SRR1232603 | HR-TB | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR1215907 | HR-TB | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR3724998 | MDR-TB | lineage4.1.3 | ci | SRR28351280 | Pre-XDR-TB | lineage2.2.1 | None | ERR4423738 | MDR-TB | lineage4.3.4.2.1 | None | ERR11068896 | Pre-XDR-TB | lineage2.2.1 | None | SRR1226239 | HR-TB | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR23340068 | MDR-TB | lineage4.2.1.1 | None | SRR3724799 | MDR-TB | lineage4.3.4.2.1 | cd | ERR978256 | XDR-TB | lineage2.2.1 | None | SRR29055400 | MDR-TB | lineage2.2.1 | None | SRR998852 | MDR-TB | lineage4.1.3 | None | SRR1221213 | HR-TB | lineage4.1.2.1;lineage4.2;lineage4.9 | None | SRR1221335 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR7657754 | Pre-XDR-TB | lineage2.2.1 | None | ERR11080875 | MDR-TB | lineage4.2.1.1 | None | SRR1223171 | HR-TB | lineage4.1.2.1;lineage4.2 | None | SRR15369027 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801698 | HR-TB | lineage4.2.1 | None | ERR3132179 | Pre-XDR-TB | lineage2.2.1 | None | SRR1221238 | Sensitive | lineage4.1.2.1;lineage4.2.1 | None | ERR13291535 | MDR-TB | lineage2.2.1 | None | ERR789239 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266893 | Pre-XDR-TB | lineage2.2.1 | None | SRR1231779 | Sensitive | lineage4.1.2;lineage4.2.1;lineage4.9 | None | SRR1233283 | Sensitive | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR1232675 | Sensitive | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR24256149 | Pre-XDR-TB | lineage4.3.3 | None | SRR1214735 | HR-TB | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR1218199 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR13180240 | MDR-TB | lineage2.2.1 | None | SRR1221638 | Sensitive | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR23340038 | XDR-TB | lineage4.2.1.1 | None | ERR3014618 | MDR-TB | lineage4.3.1 | tn | ERR8975904 | Sensitive | lineage4.1.1.3 | None | SRR28393962 | MDR-TB | lineage4.1.2.1 | None | SRR28393656 | MDR-TB | lineage4.1.4 | None | ERR4799756 | MDR-TB | lineage3.1.2 | in | ERR11067358 | Sensitive | lineage1.1.3.1 | None | ERR8665966 | MDR-TB | lineage4.2.1.1 | None | ERR1465811 | HR-TB | lineage4.1.2.1 | co | ERR789236 | XDR-TB | lineage2.2.1 | None | SRR5341292 | HR-TB | lineage2.2.1 | in | DRR130086 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR28393259 | MDR-TB | lineage4.1.2.1 | None | ERR4798032 | Pre-XDR-TB | lineage3.1.2 | in | ERR13194010 | Pre-XDR-TB | lineage2.2.2 | None | ERR13245232 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13259964 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR1218217 | Sensitive | lineage4.1.2;lineage4.2.1;lineage4.9 | None | SRR1219131 | Sensitive | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR1221359 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR12420406 | Sensitive | lineage2.2.1;lineage4 | None | SRR1232598 | Sensitive | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | ERR7363110 | Sensitive | lineage4.8 | None | SRR1230902 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | ERR4814028 | Sensitive | lineage4.8 | br | SRR23340060 | MDR-TB | lineage4.2.1.1 | None | SRR7069531 | MDR-TB | lineage4.2.1 | None | SRR7070621 | MDR-TB | lineage4.2.1 | None | SRR998849 | MDR-TB | lineage4.1.3 | None | SRR1218486 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | ERR4797037 | Pre-XDR-TB | lineage3.1.2 | None | ERR3132175 | Pre-XDR-TB | lineage2.2.1 | None | SRR1232755 | Sensitive | lineage4.1.2.1;lineage4.2;lineage4.9 | None | SRR1214359 | Sensitive | lineage4.1.2;lineage4.2.1;lineage4.9 | None | ERR13261350 | MDR-TB | lineage3.1.2 | None | ERR4814072 | Sensitive | lineage4.8 | None | SRR1226259 | HR-TB | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR1231414 | Sensitive | lineage4.1.2.1;lineage4.2.1 | None | SRR12420476 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814108 | Sensitive | lineage4.8 | br | ERR4797228 | Pre-XDR-TB | lineage2.2.1 | in | SRR1223082 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR998829 | MDR-TB | lineage4.1.3 | None | SRR23340031 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR789234 | XDR-TB | lineage2.2.1 | None | SRR1216250 | Sensitive | lineage4.1.2;lineage4.2.1;lineage4.9 | None | SRR1215539 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR1219259 | Sensitive | lineage4.1.2;lineage4.2.1;lineage4.9 | None | ERR4813908 | Sensitive | lineage4.8 | br | ERR4813918 | Sensitive | lineage4.8 | br | ERR13266490 | XDR-TB | lineage2.2.1 | None | DRR130147 | RR-TB | lineage2.2.1 | None | ERR11044238 | Pre-XDR-TB | lineage4.2.1 | None | SRR1220983 | Sensitive | lineage4.1;lineage4.2.1;lineage4.9 | None | ERR4800480 | Pre-XDR-TB | lineage2.2.1 | in | SRR23340066 | MDR-TB | lineage4.2.1.1 | None | SRR23340030 | Pre-XDR-TB | lineage4.2.1.1 | None | DRR130084 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR12420416 | Other | lineage2.2.1 | None | ERR8665965 | MDR-TB | lineage4.2.1.1 | None | SRR1222345 | Sensitive | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR29231803 | MDR-TB | lineage4.3.4.2.1 | None | SRR1232411 | Sensitive | lineage4.1.2;lineage4.2.1 | None | ERR789238 | XDR-TB | lineage2.2.1 | None | SRR1222245 | HR-TB | lineage4.1.2.1;lineage4.2.1;lineage4.9 | None | SRR17657952 | Pre-XDR-TB | lineage2.2.1 | None | SRR1215627 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR1221272 | HR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR1222872 | HR-TB | lineage4.1.2.1;lineage4.2 | None | SRR28394219 | MDR-TB | lineage4.1.1.3;lineage4.1.2.1 | None | SRR28393982 | MDR-TB | lineage4.1.2.1 | None | ERR768038 | Sensitive | lineage1.1 | th | ERR2707190 | MDR-TB | lineage4.3.4.2.1 | cd |
|---|
