Rv1694 - c.-89C>A

Drug resistance types
134 Sensitive 2 RR-TB 10 HR-TB 3 MDR-TB 9 Pre-XDR-TB 2 XDR-TB 13 Other
lineage Counts
lineage Count
lineage3 168
lineage3;lineage4.4.1.2 1
lineage1.2.1.2.1;lineage3 1
lineage2.2.1;lineage3 3
spoligotype Counts
spoligotype Count
None 173
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR28044917 Sensitive lineage3 None
SRR7585418 XDR-TB lineage3 in
ERR13388683 Sensitive lineage3 None
SRR29126148 HR-TB lineage3 None
SRR22251833 Sensitive lineage3 None
ERR4798938 Pre-XDR-TB lineage3 in
SRR22249520 Sensitive lineage3 None
SRR28044748 Sensitive lineage3 None
SRR28044745 Sensitive lineage3 None
SRR28045244 Sensitive lineage3 None
SRR28351663 Pre-XDR-TB lineage3 None
SRR28351582 XDR-TB lineage3 None
SRR28351550 Sensitive lineage3 None
SRR28044724 Pre-XDR-TB lineage3 None
SRR29356711 Sensitive lineage3 None
SRR21732504 Sensitive lineage3 None
ERR2514917 Sensitive lineage3 gb
SRR2100321 HR-TB lineage3 None
ERR4195806 Other lineage3 None
SRR6046405 Sensitive lineage3 gb
SRR2100195 Sensitive lineage3 None
SRR16058229 HR-TB lineage3 None
ERR4819150 Sensitive lineage3 None
SRR24799215 Sensitive lineage3 None
SRR21689999 Sensitive lineage3 None
SRR30182890 Sensitive lineage3 None
SRR28045207 Pre-XDR-TB lineage3 None
ERR4820972 Sensitive lineage3 gb
SRR6152700 Sensitive lineage3 ca
ERR2446336 Sensitive lineage3 nl
ERR9125885 Other lineage3 None
ERR3275280 Sensitive lineage3 nl
ERR9125864 Sensitive lineage3 None
ERR2517412 Sensitive lineage3 nl
SRR28351324 Pre-XDR-TB lineage3;lineage4.4.1.2 None
ERR11082718 Sensitive lineage3 None
SRR28044653 Sensitive lineage3 None
ERR4815621 Sensitive lineage3 gb
SRR28044943 Sensitive lineage3 None
SRR22424894 HR-TB lineage3 None
SRR24223019 Sensitive lineage3 None
SRR28044740 Sensitive lineage3 None
ERR11050936 Sensitive lineage3 None
ERR2513494 Sensitive lineage3 gb
ERR775785 Sensitive lineage3 th
SRR19324966 Sensitive lineage3 None
SRR22249643 Sensitive lineage3 None
SRR29096551 HR-TB lineage3 None
ERR386779 Sensitive lineage3 None
SRR28045433 Other lineage3 None
ERR4819503 Sensitive lineage3 None
SRR22251058 Sensitive lineage3 None
SRR7069244 Sensitive lineage3 None
SRR18213911 Sensitive lineage3 None
ERR2514397 Sensitive lineage1.2.1.2.1;lineage3 gb
SRR28859823 Sensitive lineage3 None
ERR13292432 Other lineage3 None
SRR7069516 Sensitive lineage3 None
SRR28044741 Sensitive lineage3 None
ERR11049976 Other lineage3 None
SRR25827837 Sensitive lineage3 None
ERR2513043 Sensitive lineage3 None
SRR21689650 Sensitive lineage3 None
SRR6045441 Sensitive lineage3 gb
SRR2100532 Sensitive lineage3 None
ERR4820201 Sensitive lineage3 gb
SRR28351444 MDR-TB lineage3 None
SRR28351322 Pre-XDR-TB lineage3 None
SRR28045213 Sensitive lineage3 None
SRR7069267 Sensitive lineage3 None
SRR7069541 Sensitive lineage3 None
ERR114473 HR-TB lineage3 None
SRR28044346 MDR-TB lineage3 None
SRR29440654 Sensitive lineage3 None
ERR4800536 RR-TB lineage3 in
SRR29441122 Sensitive lineage3 None
ERR387053 Sensitive lineage3 None
ERR4799840 HR-TB lineage3 in
SRR22250206 Sensitive lineage3 None
ERR13272980 Sensitive lineage3 None
SRR16058268 Sensitive lineage3 None
ERR400489 Sensitive lineage3 gb
SRR29096429 Sensitive lineage3 None
ERR2512499 Sensitive lineage2.2.1;lineage3 gb
ERR2513286 Sensitive lineage3 gb
SRR5341431 Sensitive lineage3 in
ERR228181 Sensitive lineage3 None
SRR8380954 Other lineage3 in
ERR4798546 Sensitive lineage3 in
SRR22250158 Sensitive lineage3 None
SRR26056418 Sensitive lineage3 None
ERR4816817 Other lineage3 gb
ERR4816013 Sensitive lineage3 None
SRR16058470 Other lineage3 None
ERR484748 Sensitive lineage3 None
ERR9125433 HR-TB lineage3 None
ERR13273052 Sensitive lineage3 None
SRR23252664 Sensitive lineage3 None
ERR13266425 Sensitive lineage3 None
ERR278585 Sensitive lineage3 None
SRR6046171 Sensitive lineage3 None
SRR5341280 HR-TB lineage3 in
ERR2515031 Sensitive lineage2.2.1;lineage3 gb
SRR22249786 Sensitive lineage3 None
SRR22249453 Sensitive lineage3 None
SRR6797486 Sensitive lineage3 None
ERR4800469 Sensitive lineage3 in
ERR3275159 Sensitive lineage3 nl
SRR22251513 Other lineage3 None
ERR4817525 Sensitive lineage3 gb
SRR25827370 MDR-TB lineage2.2.1;lineage3 None
ERR13266046 RR-TB lineage3 None
ERR5979464 Sensitive lineage3 None
SRR6153269 Sensitive lineage3 ca
ERR351847 Sensitive lineage3 None
ERR13261095 Sensitive lineage3 None
ERR13260915 Sensitive lineage3 None
ERR4798720 Other lineage3 in
ERR4800492 Sensitive lineage3 in
SRR5341235 Pre-XDR-TB lineage3 in
SRR6797675 Sensitive lineage3 None
ERR2446100 Sensitive lineage3 nl
SRR22250133 Sensitive lineage3 None
SRR25827536 Pre-XDR-TB lineage3 None
SRR28045169 Sensitive lineage3 None
SRR28351437 Pre-XDR-TB lineage3 None
ERR13285680 Sensitive lineage3 None
SRR29440675 Sensitive lineage3 None
SRR29440823 Sensitive lineage3 None
SRR7070001 Sensitive lineage3 None
ERR11082993 Sensitive lineage3 None
ERR13290009 Sensitive lineage3 None
ERR228175 Sensitive lineage3 None
SRR28044746 Sensitive lineage3 None
ERR13388685 Sensitive lineage3 None
ERR10465907 Sensitive lineage3 None
ERR4814927 Sensitive lineage3 gb
ERR13273148 Sensitive lineage3 None
SRR14088353 Sensitive lineage3 None
SRR27450541 Sensitive lineage3 None
SRR5341433 Other lineage3 in
SRR29096440 Other lineage3 None
ERR11050558 Sensitive lineage3 None
ERR117625 Sensitive lineage3 None
SRR6153104 Sensitive lineage3 ca
ERR4820691 Sensitive lineage3 gb
ERR12544088 Sensitive lineage3 None
SRR22251976 Sensitive lineage3 None
SRR3105795 Sensitive lineage3 None
SRR2100538 Sensitive lineage3 None
SRR29096382 Sensitive lineage3 None
SRR21732790 Sensitive lineage3 None
SRR30182316 Sensitive lineage3 None
ERR4831065 Sensitive lineage3 np
ERR2514954 Sensitive lineage3 gb
ERR386944 Sensitive lineage3 None
ERR5979408 Sensitive lineage3 None
ERR2513239 Sensitive lineage3 gb
SRR21732224 Sensitive lineage3 None
ERR4831050 Sensitive lineage3 np
ERR4819369 Sensitive lineage3 gb
SRR29440677 Sensitive lineage3 None
ERR4797886 Sensitive lineage3 in
ERR4798659 Sensitive lineage3 in
ERR4799079 Sensitive lineage3 in
ERR2512466 Sensitive lineage3 gb
SRR21728171 Sensitive lineage3 None
ERR4797449 Sensitive lineage3 in
ERR4831054 Sensitive lineage3 np
SRR22249576 Sensitive lineage3 None
ERR11068318 HR-TB lineage3 None
SRR2101186 Sensitive lineage3 None
ERR9121403 Other lineage3 None