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SRA data
Rv1694
- c.397dupC
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
3 MDR-TB
25 Pre-XDR-TB
4 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
12
lineage4.3.3
9
lineage2.2.1.1
6
lineage3.1.2.1
1
lineage4.2.1
1
lineage4.1.1.3
1
lineage4.8
1
lineage4.2.2.2
1
Showing 1 to 8 of 8 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
32
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11488597
Pre-XDR-TB
lineage4.1.1.3
None
ERR3287789
MDR-TB
lineage4.3.3
pe
ERR4799672
MDR-TB
lineage3.1.2.1
in
ERR4813116
Pre-XDR-TB
lineage4.3.3
None
ERR4813211
Pre-XDR-TB
lineage4.8
pe
ERR4830830
Pre-XDR-TB
lineage4.2.2.2
et
ERR550916
XDR-TB
lineage2.2.1
None
ERR552237
XDR-TB
lineage2.2.1
None
ERR5866299
Pre-XDR-TB
lineage4.3.3
None
ERR5866300
Pre-XDR-TB
lineage4.3.3
None
Showing 1 to 10 of 32 entries
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