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SRA data
Rv1819c
- c.249C>G
Drug resistance types
0 Sensitive
0 RR-TB
4 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
M.canetti;lineage2.1;lineage6.3
1
lineage2.1;lineage2.2;lineage6.3
1
Showing 1 to 5 of 5 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
7
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR8976043
HR-TB
lineage2.1;lineage2.2;lineage6.3
None
SRR6325442
HR-TB
lineage2.1;lineage4.1.1.1;lineage6.3
None
SRR6325444
MDR-TB
M.canetti;lineage2.1;lineage6.3
None
SRR6325445
HR-TB
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
None
SRR6325447
MDR-TB
lineage2.1;lineage4.1.1.1;lineage6.3
None
SRR6325448
HR-TB
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
None
Showing 1 to 7 of 7 entries
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