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SRA data
Rv1854c
- c.1239T>C
Drug resistance types
1 Sensitive
0 RR-TB
9 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.9
4
lineage2.1;lineage4.1.1.1;lineage6.3
2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
M.canetti;lineage2.1;lineage4.9;lineage6.3
2
M.canetti;lineage2.1;lineage4.1.2.1
1
M.canetti;lineage2.1
1
La1.7.1
1
La2;M.canetti
1
M.canetti;lineage2.2
1
lineage2.1;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
18
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1873396
Pre-XDR-TB
M.canetti;lineage2.2
None
ERR234659
Other
None
ERR266126
Sensitive
La2;M.canetti
None
ERR278594
HR-TB
lineage2.1;lineage4.9
None
ERR323041
HR-TB
M.canetti;lineage2.1
None
ERR3797016
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR386953
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR5311096
HR-TB
M.canetti;lineage2.1;lineage4.9;lineage6.3
None
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