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SRA data
Rv1854c
- c.1340_1348delAGCTGGCCG
Drug resistance types
11 Sensitive
0 RR-TB
0 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
lineage3.1.1
7
lineage2.2.1
4
lineage4.2.2.1
1
lineage2.2.1.1;lineage4.3.4.2.1
1
lineage4.5
1
lineage1.1.3.2
1
lineage4.8
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
16
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11252508
Sensitive
lineage1.1.3.2
None
ERR13289790
Sensitive
lineage3.1.1
None
ERR13289978
Sensitive
lineage3.1.1
None
ERR176504
Sensitive
lineage3.1.1
mw
ERR181717
Sensitive
lineage3.1.1
mw
ERR2041770
MDR-TB
lineage4.8
rs
ERR245766
Sensitive
lineage3.1.1
mw
ERR8975157
Sensitive
lineage2.2.1.1;lineage4.3.4.2.1
None
SRR10333503
Sensitive
lineage2.2.1
None
SRR12199463
Other
lineage4.5
None
Showing 1 to 10 of 16 entries
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