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SRA data
Rv1854c
- c.462T>C
Drug resistance types
0 Sensitive
0 RR-TB
3 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
2
La1.7;M.canetti;lineage4.9
2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
1
lineage2.2.1
1
La1.2.BCG
1
M.canetti;lineage4.9
1
Showing 1 to 8 of 8 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
12
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR13245563
Pre-XDR-TB
lineage2.2.1
None
ERR3797014
Other
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR3797017
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR3797044
Other
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9
None
ERR3797046
HR-TB
lineage4.9
None
ERR4798262
HR-TB
La1.2.BCG
None
SRR6044835
Other
lineage4.9
None
SRR6045399
Other
M.canetti;lineage4.9
None
SRR6045887
Other
La1.7;M.canetti;lineage4.9
None
SRR6046362
MDR-TB
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
None
Showing 1 to 10 of 12 entries
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