lineage | Count |
---|---|
lineage4.8 | 37 |
lineage1.2.1.2.1 | 4 |
lineage4.1.1.1 | 1 |
lineage2.2.1 | 19 |
lineage4.3.4.1 | 5 |
lineage3 | 10 |
lineage4.1.2 | 8 |
lineage1.2.1.2 | 1 |
lineage4.3.3 | 7 |
lineage4.1.2.1 | 11 |
lineage4.3.2 | 7 |
lineage4.3.2.1 | 14 |
lineage4.2.2.1 | 2 |
lineage4.2.2.2 | 4 |
lineage1.1.2 | 3 |
lineage4.4.1.1 | 2 |
lineage4.6.1.1 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.3.4 | 1 |
lineage4.3.4.2 | 3 |
lineage4.1.1 | 1 |
lineage2.2 | 15 |
lineage2 | 1 |
lineage2.1 | 1 |
La1.8.1 | 4 |
lineage4.3 | 1 |
lineage1.1.3.3 | 1 |
lineage3.1.1 | 1 |
lineage4.5 | 3 |
1 | |
lineage1.1.3.2 | 1 |
spoligotype | Count |
---|---|
None | 172 |
ID | Drug resistance | Lineage | Country iso2 | ERR2229730 | Sensitive | lineage4.8 | dk | ERR2200073 | HR-TB | lineage1.2.1.2.1 | de | SRR4034781 | Sensitive | lineage4.1.1.1 | za | SRR4033184 | RR-TB | lineage2.2.1 | za | ERR2199871 | Sensitive | lineage4.3.4.1 | de | ERR1193841 | Sensitive | lineage4.3.4.1 | pt | SRR4035544 | RR-TB | lineage3 | za | ERR552687 | Other | lineage1.2.1.2.1 | de | ERR2199893 | HR-TB | lineage4.8 | de | ERR3275363 | Sensitive | lineage3 | nl | ERR2510813 | Sensitive | lineage4.8 | None | SRR4034704 | Sensitive | lineage4.1.2 | za | SRR4034380 | Sensitive | lineage4.1.2 | za | SRR5818674 | Sensitive | lineage3 | dj | ERR551656 | Sensitive | lineage4.8 | de | SRR4033209 | RR-TB | lineage2.2.1 | za | ERR552762 | Sensitive | lineage1.2.1.2 | de | ERR2515482 | RR-TB | lineage4.8 | None | ERR551902 | Sensitive | lineage4.3.3 | de | ERR3275368 | Sensitive | lineage3 | nl | ERR2229344 | Sensitive | lineage4.8 | dk | ERR2517265 | Sensitive | lineage4.1.2.1 | None | SRR4034454 | Sensitive | lineage4.3.2 | za | SRR4033543 | Sensitive | lineage4.3.2.1 | None | ERR553287 | Sensitive | lineage4.2.2.1 | de | SRR4034443 | Sensitive | lineage4.3.2 | za | ERR551454 | Sensitive | lineage4.8 | None | SRR4034019 | Sensitive | lineage4.3.2.1 | za | SRR5818569 | Sensitive | lineage4.2.2.2 | dj | ERR2200126 | Sensitive | lineage1.1.2 | de | SRR5818673 | Other | lineage4.2.2.2 | dj | ERR1465840 | Sensitive | lineage4.8 | None | ERR2510682 | Pre-XDR-TB | lineage2.2.1 | it | ERR2199962 | Sensitive | lineage4.3.3 | de | SRR4033152 | RR-TB | lineage2.2.1 | za | SRR5818678 | HR-TB | lineage3 | dj | SRR5818682 | RR-TB | lineage4.1.2 | None | ERR1465849 | Sensitive | lineage4.8 | None | ERR1465741 | HR-TB | lineage4.1.2.1 | pe | ERR2199903 | RR-TB | lineage4.8 | de | ERR552372 | Other | lineage2.2.1 | de | ERR2510681 | HR-TB | lineage4.4.1.1 | it | SRR5818701 | Sensitive | lineage4.1.2.1 | dj | SRR4033183 | RR-TB | lineage2.2.1 | za | ERR552512 | Sensitive | lineage4.8 | de | ERR551818 | Sensitive | lineage4.2.2.1 | de | ERR2229310 | Sensitive | lineage4.8 | dk | ERR2229370 | Sensitive | lineage4.8 | None | SRR4034304 | Sensitive | lineage4.1.2 | za | SRR4034623 | Sensitive | lineage4.3.2.1 | za | SRR4034618 | Sensitive | lineage4.3.3 | None | SRR8237300 | Other | lineage2.2.1 | ch | SRR4034429 | Sensitive | lineage4.4.1.1 | za | ERR2446136 | Sensitive | lineage3 | nl | SRR4034043 | Sensitive | lineage4.3.2.1 | za | ERR2517154 | Sensitive | lineage4.6.1.1 | nl | ERR2229335 | Sensitive | lineage4.8 | dk | SRR4033180 | RR-TB | lineage2.2.1 | za | SRR4034199 | Other | lineage4.3.2.1 | None | ERR2510721 | Sensitive | lineage4.1.2.1 | it | ERR1193809 | Sensitive | lineage4.3.4.1 | de | ERR2229388 | Sensitive | lineage4.8 | None | ERR2229382 | Sensitive | lineage4.8 | None | SRR5818698 | Sensitive | lineage1.1.2 | dj | ERR551756 | Sensitive | lineage4.3.3 | de | ERR2229309 | Sensitive | lineage4.8 | None | ERR551312 | Sensitive | lineage4.3.4.1 | de | ERR2229342 | Sensitive | lineage4.8 | dk | SRR4033201 | RR-TB | lineage2.2.1 | za | ERR2229341 | Sensitive | lineage4.8 | dk | ERR1465956 | Sensitive | lineage4.8 | ba | ERR553159 | Other | lineage2.2.1 | de | SRR4033972 | Sensitive | lineage4.3.2.1 | za | SRR4033659 | Sensitive | lineage4.4.1.1.1 | za | ERR2229327 | Sensitive | lineage4.8 | dk | SRR4034056 | Sensitive | lineage4.3.2.1 | za | SRR4033210 | HR-TB | lineage2.2.1 | None | ERR2229356 | Sensitive | lineage4.8 | dk | ERR1465864 | RR-TB | lineage4.8 | None | SRR4034057 | Sensitive | lineage4.3.2.1 | za | SRR5818573 | Sensitive | lineage2.2.1 | dj | ERR1193767 | Sensitive | lineage4.3.3 | np | SRR4033166 | RR-TB | lineage2.2.1 | za | ERR2229317 | HR-TB | lineage4.8 | dk | SRR4033194 | RR-TB | lineage2.2.1 | za | ERR550921 | Sensitive | lineage4.8 | de | ERR2229343 | Sensitive | lineage4.8 | dk | ERR10969110 | Other | lineage2.2.1.1 | None | SRR4033158 | RR-TB | lineage2.2.1 | za | ERR10969172 | MDR-TB | lineage4.3.4 | None | ERR10969157 | Sensitive | lineage4.3.2 | None | ERR10969186 | Sensitive | lineage4.3.3 | None | ERR10969164 | Sensitive | lineage4.3.4.1 | None | ERR10969220 | HR-TB | lineage4.3.4.2 | None | ERR10969205 | Sensitive | lineage4.1.1 | None | ERR8158003 | Other | lineage2.2 | None | ERR10969262 | Sensitive | lineage4.8 | None | ERR10969238 | Sensitive | lineage4.1.2 | None | ERR8158008 | Other | lineage2.2 | None | ERR8158037 | Sensitive | lineage2.2 | None | ERR8158011 | HR-TB | lineage2.2 | None | ERR8158063 | Sensitive | lineage2.2 | None | ERR8158042 | Sensitive | lineage2.2 | None | ERR8158041 | Sensitive | lineage2 | None | ERR8158059 | Other | lineage2.2 | None | ERR8158055 | Sensitive | lineage2.2 | None | ERR8158083 | Sensitive | lineage2.2 | None | ERR8158071 | Sensitive | lineage2.2 | None | ERR8158080 | Sensitive | lineage2.2 | None | ERR8158096 | HR-TB | lineage2.2 | None | ERR8158091 | Sensitive | lineage2.2 | None | ERR8158094 | Sensitive | lineage2.2 | None | ERR8158089 | Sensitive | lineage2.2 | None | SRR20139555 | HR-TB | lineage4.1.2.1 | None | ERR8773616 | MDR-TB | lineage2.1 | None | SRR23174148 | Other | La1.8.1 | None | SRR23174158 | Other | La1.8.1 | None | SRR23174150 | Other | La1.8.1 | None | SRR4033197 | RR-TB | lineage2.2.1 | za | SRR23174430 | Other | La1.8.1 | None | SRR4034439 | Sensitive | lineage4.3.2 | za | SRR4034437 | Sensitive | lineage4.3.2 | za | ERR1193822 | Sensitive | lineage4.3.3 | de | SRR4035847 | Sensitive | lineage4.3.2.1 | za | ERR2446139 | Sensitive | lineage1.2.1.2.1 | nl | SRR5818679 | HR-TB | lineage4.3 | dj | ERR4828783 | MDR-TB | lineage2.2.1 | None | ERR2229686 | Sensitive | lineage4.8 | None | ERR3275410 | Sensitive | lineage1.2.1.2.1 | nl | ERR2199974 | Sensitive | lineage4.1.2.1 | de | ERR550700 | Sensitive | lineage4.1.2.1 | de | SRR4034284 | Sensitive | lineage4.1.2 | za | ERR2446207 | Sensitive | lineage3 | nl | SRR4033193 | RR-TB | lineage2.2.1 | za | SRR7517735 | MDR-TB | lineage4.3.4.2 | ch | SRR4034336 | Sensitive | lineage4.3.2.1 | za | ERR551632 | HR-TB | lineage1.1.3.3 | de | ERR2229446 | Sensitive | lineage4.8 | None | SRR4034444 | Sensitive | lineage4.3.2 | za | ERR552248 | Sensitive | lineage4.1.2.1 | de | SRR5818683 | Sensitive | lineage3.1.1 | dj | ERR552266 | Sensitive | lineage4.5 | de | SRR5818703 | Sensitive | lineage4.2.2.2 | dj | SRR4034042 | Sensitive | lineage4.3.2.1 | za | ERR550846 | Sensitive | lineage3 | de | ERR551268 | Sensitive | lineage4.8 | de | SRR4034693 | Sensitive | lineage4.1.2 | za | SRR5818567 | Sensitive | dj | ERR2199915 | Sensitive | lineage4.5 | de | ERR2517446 | Sensitive | lineage3 | nl | SRR4034460 | Sensitive | lineage4.3.2 | za | ERR2229682 | Sensitive | lineage4.8 | dk | ERR552860 | Sensitive | lineage4.1.2.1 | de | SRR4033494 | Sensitive | lineage4.3.2.1 | None | ERR552832 | Sensitive | lineage4.5 | de | SRR5818675 | Sensitive | lineage1.1.2 | None | ERR2510857 | MDR-TB | lineage4.1.2.1 | None | ERR2229214 | Sensitive | lineage4.8 | dk | ERR1465869 | Sensitive | lineage4.8 | None | SRR4033211 | RR-TB | lineage2.2.1 | za | SRR4034204 | HR-TB | lineage4.3.2.1 | None | ERR2199809 | Sensitive | lineage4.3.4.2 | de | SRR4034041 | Sensitive | lineage4.3.2.1 | za | ERR2229688 | Sensitive | lineage4.8 | None | SRR4034302 | Sensitive | lineage4.1.2 | za | ERR2229353 | Sensitive | lineage4.8 | dk | ERR551077 | Sensitive | lineage4.1.2.1 | de | ERR1465841 | Sensitive | lineage4.8 | None | SRR5818602 | MDR-TB | lineage3 | dj | SRR5818581 | MDR-TB | lineage4.2.2.2 | dj | ERR2229089 | Sensitive | lineage4.8 | None | ERR2514714 | Sensitive | lineage1.1.3.2 | gb |
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