lineage | Count |
---|---|
lineage4.5 | 7 |
lineage2.2.1 | 2 |
lineage1.1.1 | 3 |
lineage4.1.2 | 2 |
lineage4.3.2.1 | 8 |
lineage4.3.4.2 | 4 |
lineage4.1.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.1.2.1 | 2 |
lineage2.2.1.1 | 1 |
lineage2.2.1;lineage4.5 | 1 |
lineage4.3.4.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 35 |
ID | Drug resistance | Lineage | Country iso2 | ERR9125635 | HR-TB | lineage4.5 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR117694 | HR-TB | lineage1.1.1 | None | ERR2179667 | MDR-TB | lineage4.5 | cn | SRR29231830 | MDR-TB | lineage4.1.2 | None | SRR21733120 | MDR-TB | lineage2.2.1 | None | ERR2515407 | Pre-XDR-TB | lineage4.3.2.1 | za | ERR2653199 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR28389877 | MDR-TB | lineage4.1.1 | None | SRR26331614 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR751968 | HR-TB | lineage1.1.1 | th | ERR553350 | MDR-TB | lineage4.3.2.1 | sz | SRR26056429 | HR-TB | lineage1.2.1.2.1 | None | ERR4809304 | XDR-TB | lineage4.3.2.1 | za | SRR16370329 | HR-TB | lineage4.5 | None | SRR10341357 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR16058436 | HR-TB | lineage4.5 | None | SAMN03246657 | MDR-TB | lineage4.5 | cn | SRR29881209 | HR-TB | lineage4.1.2.1 | None | ERR9806710 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR6003544 | MDR-TB | lineage2.2.1.1 | au | SRR5709938 | Pre-XDR-TB | lineage4.3.4.2 | th | ERR1193898 | MDR-TB | lineage4.3.2.1 | sz | ERR10748266 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR1723944 | MDR-TB | lineage2.2.1;lineage4.5 | None | SRR10828207 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR3256203 | MDR-TB | lineage4.3.4.1 | ph | ERR8975598 | HR-TB | lineage4.4.1.1 | None | SRR2100256 | HR-TB | lineage1.1.1 | None | SRR28357655 | HR-TB | lineage4.1.2.1 | None | ERR2707029 | MDR-TB | lineage4.1.2 | cd | SRR6824640 | MDR-TB | lineage4.5 | cn | SRR1723945 | MDR-TB | lineage4.5 | None | SRR5710019 | Pre-XDR-TB | lineage4.8 | th | ERR10610248 | Pre-XDR-TB | lineage4.3.2.1 | None |
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