lineage | Count |
---|---|
lineage4.8 | 8 |
lineage3.1.1 | 2 |
lineage2.2.1 | 38 |
lineage4.4.2;lineage1.1.1.1 | 1 |
lineage4.2.2.2;lineage2.2.1 | 1 |
lineage2.2.1.1 | 8 |
lineage3 | 8 |
lineage4.6.5 | 1 |
lineage1.1.2 | 1 |
lineage2.2.1.2 | 1 |
lineage2.2.2 | 7 |
lineage4.2.2.1 | 1 |
lineage4.2.2.2 | 1 |
lineage2.2 | 2 |
lineage2.2.1;lineage1.2.2.2 | 1 |
lineage4 | 1 |
lineage3.1.2.1 | 2 |
lineage4.7 | 2 |
lineage4.1.2.1 | 2 |
lineage3.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.8.1 | 1 |
spoligotype | Count |
---|---|
None | 91 |
ID | Drug resistance | Lineage | Country iso2 | ERR4195620 | HR-TB | lineage4.8 | None | ERR4596895 | MDR-TB | lineage3.1.1 | None | ERR2515373 | MDR-TB | lineage2.2.1 | za | ERR4596899 | MDR-TB | lineage3.1.1 | None | ERR4830343 | HR-TB | lineage4.4.2;lineage1.1.1.1 | vn | ERR2515263 | MDR-TB | lineage2.2.1 | za | ERR9286006 | HR-TB | lineage4.2.2.2;lineage2.2.1 | None | ERR5865400 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987281 | HR-TB | lineage2.2.1.1 | None | SRR26936936 | MDR-TB | lineage2.2.1.1 | None | SRR26112303 | HR-TB | lineage2.2.1 | None | ERR9120026 | HR-TB | lineage2.2.1.1 | None | ERR9120027 | HR-TB | lineage2.2.1.1 | None | ERR9121749 | HR-TB | lineage4.8 | None | SRR10305715 | HR-TB | lineage2.2.1 | None | ERR987747 | MDR-TB | lineage3 | None | SRR10185948 | MDR-TB | lineage2.2.1 | None | SRR10305965 | Pre-XDR-TB | lineage2.2.1 | None | SRR10809102 | MDR-TB | lineage4.6.5 | None | SRR10306032 | MDR-TB | lineage2.2.1 | None | SRR10766999 | MDR-TB | lineage2.2.1.1 | None | SRR10808756 | HR-TB | lineage4.8 | None | SRR15661599 | MDR-TB | lineage2.2.1.1 | None | SRR12416845 | MDR-TB | lineage2.2.1 | None | SRR15014600 | MDR-TB | lineage1.1.2 | None | SRR15014678 | MDR-TB | lineage2.2.1.1 | None | SRR15014700 | MDR-TB | lineage2.2.1.2 | None | SRR21576656 | MDR-TB | lineage2.2.1 | None | SRR15723095 | HR-TB | lineage2.2.1 | None | SRR15904139 | MDR-TB | lineage2.2.2 | None | SRR16149144 | MDR-TB | lineage4.2.2.1 | None | SRR16370537 | MDR-TB | lineage2.2.2 | None | ERR11067673 | HR-TB | lineage4.2.2.2 | None | SRR671781 | Pre-XDR-TB | lineage2.2.1 | cn | ERR10610244 | MDR-TB | lineage2.2 | None | ERR9806737 | MDR-TB | lineage2.2 | None | SRR25534273 | HR-TB | lineage2.2.1 | None | SRR25827646 | Pre-XDR-TB | lineage2.2.1;lineage1.2.2.2 | None | SRR1723638 | Pre-XDR-TB | lineage2.2.1 | cn | SRR671736 | MDR-TB | lineage2.2.1 | cn | SRR671744 | MDR-TB | lineage2.2.1 | cn | SRR21887725 | MDR-TB | lineage2.2.1 | None | SRR28240124 | HR-TB | lineage4 | None | SRR671819 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824654 | MDR-TB | lineage2.2.1 | cn | SRR6824546 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824617 | HR-TB | lineage2.2.1 | cn | ERR2510583 | MDR-TB | lineage3 | None | SRR1723840 | MDR-TB | lineage2.2.1 | cn | SRR6117338 | MDR-TB | lineage2.2.1.1 | au | ERR1035094 | HR-TB | lineage2.2.1 | vn | SRR671848 | MDR-TB | lineage2.2.1 | cn | SRR5067701 | HR-TB | lineage2.2.2 | vn | SRR5073959 | HR-TB | lineage2.2.2 | vn | SRR5065567 | HR-TB | lineage2.2.2 | vn | SRR5073660 | HR-TB | lineage2.2.2 | vn | ERR718337 | HR-TB | lineage2.2.1 | th | ERR751484 | MDR-TB | lineage4.8 | pe | DRR185120 | HR-TB | lineage2.2.1 | vn | ERR502886 | MDR-TB | lineage2.2.1 | None | ERR4798126 | HR-TB | lineage3 | in | ERR7911117 | MDR-TB | lineage2.2.2 | vn | SRR5338516 | Pre-XDR-TB | lineage2.2.1 | None | ERR270668 | HR-TB | lineage3.1.2.1 | None | ERR4830141 | MDR-TB | lineage2.2.1 | tj | SRR2099961 | HR-TB | lineage3.1.2.1 | None | SAMEA2533484 | MDR-TB | lineage2.2.1 | uz | SRR1166162 | MDR-TB | lineage4.7 | ro | ERR4827953 | MDR-TB | lineage2.2.1 | None | ERR4798938 | Pre-XDR-TB | lineage3 | in | SRR6480431 | HR-TB | lineage4.8 | None | ERR4811343 | MDR-TB | lineage2.2.1 | cn | ERR4830967 | Pre-XDR-TB | lineage4.1.2.1 | np | ERR4800507 | HR-TB | lineage3.1.2 | in | ERR4800199 | MDR-TB | lineage4.8 | in | SRR6982354 | HR-TB | lineage4.3.4.2.1 | None | ERR2510529 | MDR-TB | lineage3 | pk | ERR4830760 | MDR-TB | lineage3 | ir | ERR2510496 | Pre-XDR-TB | lineage3 | pk | ERR3287821 | MDR-TB | lineage4.8 | pe | ERR3287812 | MDR-TB | lineage4.8 | pe | DRR130076 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510294 | Pre-XDR-TB | lineage3 | pk | SRR7592332 | MDR-TB | lineage4.7 | None | DRR130181 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488619 | MDR-TB | lineage4.8.1 | None | DRR130180 | Pre-XDR-TB | lineage2.2.1 | None | DRR130182 | MDR-TB | lineage2.2.1 | None | ERR10680162 | MDR-TB | lineage4.1.2.1 | None | ERR10748536 | MDR-TB | lineage2.2.1 | None | ERR3273200 | MDR-TB | lineage2.2.1 | None |
---|