lineage | Count |
---|---|
lineage2.2.1 | 9 |
lineage4.9 | 2 |
lineage3 | 2 |
lineage4.6.1.1 | 2 |
lineage4.1.3 | 2 |
lineage2.2.1.1 | 7 |
lineage4.4.1.1 | 1 |
lineage4.1.1.1 | 2 |
lineage4.3.3 | 2 |
lineage4.3.2.1 | 2 |
lineage2.2;lineage4.2.2.2 | 1 |
lineage1.1.2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.3.4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 35 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR29093692 | MDR-TB | lineage2.2.1 | None |
ERR2510394 | Pre-XDR-TB | lineage2.2.1 | None |
ERR10610134 | MDR-TB | lineage4.9 | None |
SRR5341326 | MDR-TB | lineage3 | in |
SRR23650984 | HR-TB | lineage4.9 | None |
ERR1199131 | MDR-TB | lineage4.6.1.1 | ug |
ERR552432 | MDR-TB | lineage4.1.3 | cg |
ERR552431 | MDR-TB | lineage4.1.3 | cg |
SRR11567817 | Pre-XDR-TB | lineage2.2.1.1 | None |
ERR4827972 | MDR-TB | lineage2.2.1 | None |
SRR25389515 | MDR-TB | lineage2.2.1 | None |
SRR29772425 | Pre-XDR-TB | lineage4.4.1.1 | None |
SRR15661608 | MDR-TB | lineage2.2.1.1 | None |
SRR11567818 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR11567819 | MDR-TB | lineage2.2.1.1 | None |
SRR25389463 | HR-TB | lineage2.2.1 | None |
SRR29772742 | HR-TB | lineage4.1.1.1 | None |
ERR4809254 | MDR-TB | lineage2.2.1.1 | za |
ERR13288872 | MDR-TB | lineage2.2.1.1 | None |
SRR25389462 | MDR-TB | lineage2.2.1 | None |
SRR8651610 | Pre-XDR-TB | lineage2.2.1.1 | cn |
SRR13583410 | MDR-TB | lineage4.3.3 | None |
ERR9806683 | MDR-TB | lineage4.3.2.1 | None |
SRR18593214 | MDR-TB | lineage2.2;lineage4.2.2.2 | None |
SRR5341420 | MDR-TB | lineage1.1.2 | in |
SRR10185953 | MDR-TB | lineage2.2.1 | None |
ERR987780 | MDR-TB | lineage4.6.1.1 | None |
SRR29094459 | MDR-TB | lineage4.1.2.1 | None |
SRR5341416 | MDR-TB | lineage3 | in |
SRR6855922 | Pre-XDR-TB | lineage2.2.1 | None |
ERR10610279 | MDR-TB | lineage4.3.2.1 | None |
SRR29050874 | MDR-TB | lineage4.3.3 | None |
ERR2515156 | Pre-XDR-TB | lineage2.2.1 | za |
ERR8975451 | HR-TB | lineage4.1.1.1 | None |
ERR4809228 | MDR-TB | lineage4.3.4.2.1 | za |