lineage | Count |
---|---|
lineage4.6.1.1 | 2 |
lineage2.2.1.1 | 6 |
lineage4.1.1 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.9 | 3 |
lineage2.2.1 | 5 |
lineage4.3.3 | 1 |
lineage1.1.2 | 2 |
lineage4.3.2.1 | 2 |
lineage4.2.2.2;lineage2.2 | 1 |
lineage3 | 2 |
lineage4.1.3 | 2 |
spoligotype | Count |
---|---|
None | 29 |
ID | Drug resistance | Lineage | Country iso2 | ERR987780 | MDR-TB | lineage4.6.1.1 | None | ERR4809254 | MDR-TB | lineage2.2.1.1 | za | ERR8975451 | HR-TB | lineage4.1.1 | None | ERR4809228 | MDR-TB | lineage4.3.4.2.1 | za | SRR11567817 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1013530 | HR-TB | lineage4.9 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR10185953 | MDR-TB | lineage2.2.1 | None | SRR11567818 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11567819 | MDR-TB | lineage2.2.1.1 | None | SRR15661608 | MDR-TB | lineage2.2.1.1 | None | SRR13583410 | MDR-TB | lineage4.3.3 | None | SRR15014765 | MDR-TB | lineage1.1.2 | None | ERR9806683 | MDR-TB | lineage4.3.2.1 | None | SRR18593214 | MDR-TB | lineage4.2.2.2;lineage2.2 | None | ERR245725 | HR-TB | lineage4.3.4.2.1 | mw | ERR10610134 | MDR-TB | lineage4.9 | None | ERR10610279 | MDR-TB | lineage4.3.2.1 | None | ERR2510394 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341420 | MDR-TB | lineage1.1.2 | in | SRR5341416 | MDR-TB | lineage3 | in | ERR4827972 | MDR-TB | lineage2.2.1 | None | ERR552431 | MDR-TB | lineage4.1.3 | cg | SRR5341326 | MDR-TB | lineage3 | in | ERR2515156 | Pre-XDR-TB | lineage2.2.1 | za | ERR552432 | MDR-TB | lineage4.1.3 | cg | SRR6855922 | Pre-XDR-TB | lineage2.2.1 | None | SRR8651610 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR1199131 | MDR-TB | lineage4.6.1.1 | ug |
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