lineage | Count |
---|---|
lineage4.6.1.2 | 1 |
lineage2.2.1 | 17 |
lineage4.7 | 4 |
lineage4.2.2.2 | 2 |
lineage2.2.1.1 | 11 |
lineage3 | 2 |
lineage4.3.3 | 1 |
lineage4.2.2 | 2 |
lineage4.2.1.1 | 1 |
lineage2.1 | 1 |
lineage4 | 2 |
lineage4.4.2 | 3 |
lineage4.1.2.1 | 7 |
lineage3.1.3 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 57 |
ID | Drug resistance | Lineage | Country iso2 | SRR29093847 | MDR-TB | lineage4.6.1.2 | None | SRR6785244 | HR-TB | lineage2.2.1 | None | ERR1034628 | HR-TB | lineage4.7 | br | ERR4818502 | HR-TB | lineage4.2.2.2 | gb | SRR22873602 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165685 | MDR-TB | lineage2.2.1.1 | None | ERR2513266 | HR-TB | lineage3 | gb | ERR2516457 | MDR-TB | lineage4.3.3 | pe | ERR6544662 | HR-TB | lineage4.7 | None | SRR12142321 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810990 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4810950 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02403606 | MDR-TB | lineage2.2.1.1 | za | SRR25207278 | MDR-TB | lineage2.2.1 | None | SRR25206974 | Pre-XDR-TB | lineage2.2.1 | None | SRR1011519 | Pre-XDR-TB | lineage4.2.2 | None | SRR28240160 | HR-TB | lineage4.2.1.1 | None | SRR6824494 | MDR-TB | lineage2.2.1 | cn | ERR13290675 | Pre-XDR-TB | lineage2.1 | None | ERR6544663 | HR-TB | lineage4.7 | None | SRR28393313 | Pre-XDR-TB | lineage4 | None | SRR1172035 | MDR-TB | lineage2.2.1.1 | None | SRR1723549 | MDR-TB | lineage2.2.1 | cn | SRR1169208 | MDR-TB | lineage2.2.1.1 | None | SRR1165684 | MDR-TB | lineage2.2.1.1 | None | SRR1172159 | MDR-TB | lineage2.2.1.1 | None | SRR833217 | Pre-XDR-TB | lineage4.2.2 | None | SRR15316091 | HR-TB | lineage4.4.2 | None | SRR12420590 | MDR-TB | lineage4.4.2 | None | SRR20969627 | HR-TB | lineage4.4.2 | None | SRR7069743 | HR-TB | lineage3 | None | SRR6824496 | MDR-TB | lineage2.2.1 | cn | SRR10305625 | MDR-TB | lineage2.2.1 | None | ERR11081724 | MDR-TB | lineage2.2.1 | None | SRR25207227 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680007 | MDR-TB | lineage4.1.2.1 | None | ERR10680029 | MDR-TB | lineage4.1.2.1 | None | SAMN02403607 | MDR-TB | lineage2.2.1.1 | za | ERR2510620 | MDR-TB | lineage3.1.3 | pk | ERR13194017 | Pre-XDR-TB | lineage2.2.1 | None | SRR29127052 | HR-TB | lineage4.1.2.1 | None | ERR13284794 | MDR-TB | lineage2.2.1 | None | SRR10305624 | MDR-TB | lineage2.2.1 | None | SRR1167332 | MDR-TB | lineage2.2.1.1 | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | SRR29096951 | HR-TB | lineage4.1.2.1 | None | SRR6824304 | MDR-TB | lineage2.2.1;lineage4 | cn | SRR1165705 | MDR-TB | lineage2.2.1.1 | None | SRR22424734 | MDR-TB | lineage4.2.2.2 | None | SRR29096113 | MDR-TB | lineage4.1.2.1 | None | SRR1169202 | MDR-TB | lineage2.2.1.1 | None | ERR1034618 | HR-TB | lineage4.7 | br | SRR8237353 | HR-TB | lineage2.2.1.1 | None | SRR28393947 | Pre-XDR-TB | lineage4 | None | SRR28394280 | MDR-TB | lineage4.8 | None | SRR1723588 | MDR-TB | lineage2.2.1 | cn | SRR29049024 | MDR-TB | lineage4.1.2.1 | None |
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