Rv1918c - c.1344A>G
Drug resistance types
137 Sensitive
7 RR-TB
25 HR-TB
17 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 11 |
| lineage1.1.3.1 | 2 |
| lineage2.2.2 | 1 |
| lineage2.2.1 | 12 |
| 2 | |
| lineage1.2.1.2.1 | 2 |
| La1.7.X-unk4 | 1 |
| lineage4 | 20 |
| La1.2 | 3 |
| La1.7 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.3.3 | 13 |
| lineage4.1.1.3 | 1 |
| lineage3.1.1 | 4 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.2.2.1 | 1 |
| lineage4.8 | 100 |
| lineage4.3.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.9 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2 | 3 |
| lineage1.1.2 | 2 |
| lineage4.1.4 | 1 |
| lineage2.2.1.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.2.1 | 3 |
| lineage4.2.2.2 | 2 |
| lineage4.4.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3.3;lineage2.2.1 | 1 |
| lineage4.7 | 2 |
| La1.6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 214 |
Geographic prevalence
Country level data for this variant is available for 33 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11972268 | Sensitive | lineage3 | None | SRR11972166 | Sensitive | lineage1.1.3.1 | None | SRR11972171 | RR-TB | lineage2.2.2 | None | SRR11972168 | Sensitive | lineage3 | None | SRR12199426 | Sensitive | lineage1.1.3.1 | None | SRR11972434 | Sensitive | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12199389 | Other | None | SRR12199416 | HR-TB | lineage1.2.1.2.1 | None | SRR13986565 | Other | La1.7.X-unk4 | None | SRR12199451 | Sensitive | lineage4 | None | SRR13986564 | Other | La1.2 | None | SRR13986561 | Other | La1.7 | None | SRR13986568 | Other | La1.2 | None | SRR13986567 | Other | La1.2 | None | SRR14088364 | MDR-TB | lineage3 | None | SRR14164453 | HR-TB | lineage4.4.1.1 | None | SRR14164356 | Sensitive | lineage4.3.3 | None | SRR14088367 | MDR-TB | lineage3 | None | SRR14088384 | MDR-TB | lineage3 | None | SRR21677867 | Sensitive | lineage4.1.1.3 | None | SRR17163499 | MDR-TB | lineage3.1.1 | None | SRR2099925 | Sensitive | lineage4.3.4.2.1 | None | SRR14164680 | Sensitive | lineage4.3.3 | None | SRR14164804 | Sensitive | lineage4.1.2.1 | None | SRR14164997 | Sensitive | lineage4.3.3 | None | SRR16149152 | MDR-TB | lineage4.2.2.1 | None | SRR21240030 | Sensitive | lineage4.3.3 | None | SRR3391832 | HR-TB | lineage4.8 | None | ERR4814437 | Other | lineage4.1.2.1 | None | ERR4815312 | Sensitive | lineage3 | gb | ERR4815043 | Sensitive | lineage4.1.2.1 | None | ERR2486973 | Sensitive | lineage4.3.2 | None | ERR2229534 | Sensitive | lineage4.8 | dk | ERR2229531 | Sensitive | lineage4.8 | None | ERR2228985 | Sensitive | lineage4 | None | ERR2229538 | HR-TB | lineage4.8 | None | ERR2228948 | Sensitive | lineage4.8 | None | ERR2229551 | Sensitive | lineage4.8 | None | ERR2229010 | Sensitive | lineage4 | None | ERR2229005 | Sensitive | lineage4.8 | None | ERR2229028 | Sensitive | lineage4.8 | None | ERR2229057 | HR-TB | lineage4 | None | ERR1950027 | Sensitive | lineage4.8 | None | ERR2229745 | HR-TB | lineage4.8 | None | ERR2229040 | Sensitive | lineage4 | None | ERR2229046 | Sensitive | lineage4.8 | dk | ERR2229091 | Sensitive | lineage4.8 | None | ERR2229561 | Sensitive | lineage4.8 | None | ERR2229082 | Sensitive | lineage4.8 | None | ERR2229092 | Other | lineage4.8 | None | ERR2229103 | Sensitive | lineage4.8 | None | ERR2229096 | Sensitive | lineage4 | None | ERR2229098 | Sensitive | lineage4.8 | None | ERR2229748 | RR-TB | lineage4 | None | ERR2229105 | HR-TB | lineage4.8 | None | ERR2229107 | Sensitive | lineage4 | None | ERR2229135 | Sensitive | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229142 | HR-TB | lineage4.8 | None | ERR2229744 | Sensitive | lineage4.8 | None | ERR2229589 | HR-TB | lineage4.8 | None | ERR2229158 | Sensitive | lineage4 | None | ERR2229587 | Sensitive | lineage4.8 | None | ERR2229144 | Other | lineage4.8 | None | ERR2229152 | Sensitive | lineage4.8 | None | ERR2229177 | Sensitive | lineage4 | None | ERR2229168 | Other | lineage4 | None | ERR2229599 | Sensitive | lineage4.8 | None | ERR2229180 | Other | lineage4 | None | ERR2229171 | Sensitive | lineage4 | None | ERR2229762 | HR-TB | lineage4.8 | None | ERR2229175 | Other | lineage4.8 | None | ERR2229190 | Sensitive | lineage4.8 | None | ERR2229184 | Sensitive | lineage4.8 | None | ERR2229600 | Sensitive | lineage4.8 | None | ERR2229751 | Sensitive | lineage4.8 | None | ERR4817117 | Sensitive | lineage4.3.2.1 | None | ERR2229605 | Sensitive | lineage4.8 | None | ERR2229228 | HR-TB | lineage4.8 | None | ERR2229200 | Sensitive | lineage4.8 | None | ERR2229201 | Sensitive | lineage4.8 | dk | ERR2229768 | Sensitive | lineage4 | None | ERR2229766 | Sensitive | lineage4.8 | None | ERR2229764 | HR-TB | lineage4.8 | None | SRR3732650 | MDR-TB | lineage4.3.3 | None | ERR2229313 | Sensitive | lineage4.8 | None | ERR2229243 | Sensitive | lineage4.8 | None | ERR2229242 | Sensitive | lineage4.8 | dk | ERR2229231 | RR-TB | lineage4.8 | None | ERR2229237 | Sensitive | lineage4.8 | None | ERR2229628 | Sensitive | lineage4.8 | None | ERR2229254 | Sensitive | lineage4.8 | dk | ERR2229633 | Sensitive | lineage4.8 | None | ERR2229638 | Sensitive | lineage4.8 | None | ERR2229370 | Sensitive | lineage4.8 | None | ERR2229311 | Sensitive | lineage4.8 | None | ERR2229320 | Sensitive | lineage4.8 | None | ERR2229318 | Sensitive | lineage4.8 | dk | ERR2229376 | Other | lineage4.8 | None | ERR2229650 | Sensitive | lineage4.8 | None | ERR2229310 | Sensitive | lineage4.8 | dk | ERR2229662 | Sensitive | lineage4.8 | dk | ERR2229344 | Sensitive | lineage4.8 | dk | ERR2229659 | Sensitive | lineage4.8 | None | ERR2229354 | Sensitive | lineage4.8 | dk | ERR2229374 | Sensitive | lineage4.8 | None | ERR2229400 | Sensitive | lineage4.8 | None | ERR2229377 | Other | lineage4.8 | None | ERR2229679 | Sensitive | lineage4.8 | dk | ERR2229401 | Sensitive | lineage4.8 | None | ERR2229397 | Sensitive | lineage4.8 | None | ERR2229399 | Sensitive | lineage4.8 | None | ERR2229394 | Other | lineage4.8 | None | ERR2229411 | Sensitive | lineage4 | None | ERR2229402 | Sensitive | lineage4.8 | None | ERR2229466 | Sensitive | lineage4.8 | dk | ERR2229459 | Sensitive | lineage4.8 | dk | ERR2229414 | Sensitive | lineage4.8 | None | ERR2229693 | HR-TB | lineage4 | None | ERR2229428 | Sensitive | lineage4.8 | None | ERR2229440 | Sensitive | lineage4.8 | None | ERR2229452 | Sensitive | lineage4.8 | None | ERR2229707 | Sensitive | lineage4.8 | None | ERR2229717 | Sensitive | lineage4 | None | ERR2229495 | Sensitive | lineage4.8 | dk | ERR2229483 | Sensitive | lineage4.8 | None | ERR2228817 | Sensitive | lineage4 | None | ERR2229494 | HR-TB | lineage4.8 | None | ERR2229504 | Sensitive | lineage4.8 | None | ERR2229501 | HR-TB | lineage4.9 | None | ERR2228823 | Sensitive | lineage4 | None | ERR2229487 | Sensitive | lineage4.8 | None | ERR2229729 | Sensitive | lineage4 | None | ERR2229500 | Sensitive | lineage4.8 | None | ERR2229497 | Sensitive | lineage4.8 | None | ERR2229513 | RR-TB | lineage4.8 | None | ERR2228871 | Sensitive | lineage4.8 | dk | ERR2229512 | Sensitive | lineage4.8 | None | ERR2228868 | Sensitive | lineage4.8 | None | ERR2229726 | Sensitive | lineage4.8 | None | ERR2228883 | Sensitive | lineage4.8 | dk | ERR2228881 | Sensitive | lineage4.8 | dk | ERR2229514 | Sensitive | lineage4.8 | None | ERR2229737 | HR-TB | lineage4.8 | None | ERR2229731 | Sensitive | lineage4.8 | None | ERR4816927 | Sensitive | lineage3 | None | ERR2228896 | Sensitive | lineage4.8 | dk | ERR2229523 | Sensitive | lineage4.8 | None | ERR2245345 | HR-TB | lineage3.1.1 | no | ERR2245336 | Sensitive | lineage3.1.1 | no | ERR4818736 | Sensitive | lineage1.2.2.2 | None | ERR2510682 | Pre-XDR-TB | lineage2.2.1 | it | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR2503516 | Sensitive | lineage1.1.2 | fi | ERR2503397 | Sensitive | lineage4.1.4 | fi | ERR2512737 | Sensitive | lineage3 | gb | ERR4818539 | Other | lineage4.1.2.1 | None | SRR5526782 | MDR-TB | lineage2.2.1.1 | None | ERR2517058 | Sensitive | lineage3 | None | ERR2486965 | Sensitive | lineage4.1.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2513758 | Sensitive | lineage4.3.1.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR2513895 | Sensitive | lineage4.8 | None | ERR4819353 | Sensitive | lineage4.6.1.1 | gb | ERR4819378 | Other | lineage4.8 | None | ERR2515032 | Other | lineage3 | None | ERR4821133 | Sensitive | lineage4.8 | gb | ERR4821261 | Sensitive | lineage1.1.2 | None | ERR4828359 | Sensitive | lineage1.1.1.1 | None | SRR6046308 | Sensitive | lineage4.9 | None | ERR4821404 | HR-TB | lineage1.2.1.2.1 | gb | SRR6485140 | Other | lineage4.2.1 | None | ERR4830829 | MDR-TB | lineage4.2.2.2 | et | ERR4830872 | MDR-TB | lineage4.4.1.1 | sz | SRR6485056 | Sensitive | lineage2.2.1 | None | SRR6479538 | Other | None | SRR6257067 | HR-TB | lineage4.2.1 | None | SRR6256977 | Pre-XDR-TB | lineage2.2.1 | ru | SRR6257044 | MDR-TB | lineage2.2.1 | None | SRR6257062 | Sensitive | lineage4.8 | None | SRR6257064 | Sensitive | lineage4.3.3 | None | SRR6257068 | Sensitive | lineage2.2.1 | None | SRR6785216 | Sensitive | lineage4.8 | None | SRR6257066 | MDR-TB | lineage4.3.3 | None | ERR4831818 | HR-TB | lineage4.4.2 | vn | SRR6785211 | HR-TB | lineage2.2.1 | None | ERR4831873 | MDR-TB | lineage2.2.1 | vn | SRR6789632 | Sensitive | lineage4.9.1 | None | SRR8420473 | Sensitive | lineage4.4.1.1 | None | ERR4831894 | MDR-TB | lineage2.2.1.1 | None | SRR998858 | Pre-XDR-TB | lineage2.2.1 | None | SRR998855 | Sensitive | lineage4.3.3;lineage2.2.1 | None | SRR8420472 | Sensitive | lineage4.4.1.1 | None | ERR4195238 | Other | lineage4.3.4.2 | None | ERR4132452 | MDR-TB | lineage4.3.3 | None | ERR4407499 | Sensitive | lineage4.7 | None | ERR4195691 | Sensitive | lineage4.3.3 | None | ERR4407453 | HR-TB | lineage4.2.2.2 | None | ERR9121192 | Sensitive | lineage4.3.3 | None | ERR4769566 | Other | La1.6 | None | ERR9285885 | Sensitive | lineage4.4.1.1 | None | ERR9121800 | Other | lineage4.3.4.2 | None | ERR9285859 | Sensitive | lineage3.1.1 | None | ERR9892005 | HR-TB | lineage4.7 | None | SRR1002690 | MDR-TB | lineage2.2.1 | None | SRR1002685 | HR-TB | lineage4.3.3 | None | SRR1002691 | HR-TB | lineage4.2.1 | None | SRR1002698 | Sensitive | lineage4.8 | None | SRR1002693 | MDR-TB | lineage4.3.3 | None | SRR1002701 | Sensitive | lineage4.3.3 | None | SRR1002695 | Sensitive | lineage2.2.1 | None |
|---|
