Rv1918c - c.1750C>T
Drug resistance types
191 Sensitive
5 RR-TB
31 HR-TB
32 MDR-TB
30 Pre-XDR-TB
3 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 42 |
| lineage4.1.2.1 | 11 |
| lineage4.5 | 9 |
| lineage4.7 | 2 |
| lineage2.2.1 | 33 |
| lineage4.3.3 | 17 |
| lineage4.8;lineage4.1.2.1 | 1 |
| lineage4.3.4.2 | 11 |
| La1.4 | 1 |
| lineage2.2.2 | 6 |
| lineage1.1.2 | 8 |
| lineage3 | 14 |
| lineage1.2.1.2 | 6 |
| lineage4.1 | 23 |
| lineage2.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.2 | 3 |
| lineage4 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.2.1 | 19 |
| lineage5.1.1 | 25 |
| lineage3.1 | 2 |
| lineage4.1.1.2 | 12 |
| lineage4.3.4.1 | 1 |
| lineage4.4.2 | 12 |
| lineage4.4.1.2 | 2 |
| lineage4.4.1.1 | 7 |
| lineage1.1.3.1 | 9 |
| lineage4.1.1.3 | 1 |
| lineage4.2.2.2 | 5 |
| lineage1.2.2.2 | 3 |
| lineage4.3.4.1;lineage4.1.2.1 | 1 |
| lineage4.2.2.2;lineage3 | 1 |
| La1.3 | 3 |
| lineage4.6.2 | 1 |
| lineage1.2.1.2.1 | 3 |
| lineage4.6.1.2 | 1 |
| lineage4.3 | 1 |
| lineage1.2.1 | 1 |
| lineage4.1.1 | 4 |
| La1.8.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 315 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11067963 | Sensitive | lineage4.8 | None | ERR11068405 | Sensitive | lineage4.1.2.1 | None | ERR11068006 | Sensitive | lineage4.8 | None | ERR11068210 | Sensitive | lineage4.8 | None | ERR11068655 | Sensitive | lineage4.5 | None | ERR11068641 | Sensitive | lineage4.8 | None | ERR11068711 | Sensitive | lineage4.8 | None | ERR11068670 | Sensitive | lineage4.1.2.1 | None | ERR11069109 | MDR-TB | lineage4.7 | None | ERR11068969 | MDR-TB | lineage2.2.1 | None | ERR11081152 | XDR-TB | lineage4.3.3 | None | ERR11080998 | Sensitive | lineage4.8 | None | ERR11081306 | Sensitive | lineage4.3.3 | None | ERR11081405 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081335 | Sensitive | lineage4.8 | None | ERR11081809 | XDR-TB | lineage4.3.3 | None | ERR11081546 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11081575 | Sensitive | lineage4.8;lineage4.1.2.1 | None | ERR11081913 | MDR-TB | lineage4.3.3 | None | ERR11082372 | Sensitive | lineage4.3.4.2 | None | ERR11082321 | Sensitive | lineage4.1.2.1 | None | ERR11082412 | Sensitive | lineage4.1.2.1 | None | ERR11082582 | Sensitive | lineage4.3.4.2 | None | SRR14519131 | Sensitive | lineage2.2.1 | None | ERR11082583 | Sensitive | lineage4.3.4.2 | None | ERR11082584 | Sensitive | lineage4.3.4.2 | None | SRR23562879 | Other | La1.4 | None | SRR14519136 | Sensitive | lineage2.2.1 | None | SRR24466774 | Sensitive | lineage4.8 | None | SRR14519156 | Sensitive | lineage2.2.2 | None | SRR28119733 | Sensitive | lineage2.2.1 | None | SRR2467268 | HR-TB | lineage1.1.2 | None | SRR2467270 | HR-TB | lineage3 | None | ERR4815787 | Other | lineage2.2.1 | None | ERR1465861 | Sensitive | lineage4.8 | None | ERR1465977 | Sensitive | lineage4.8 | None | ERR4815354 | Other | lineage1.2.1.2 | None | SRR3105791 | Pre-XDR-TB | lineage3 | None | SRR3544723 | Sensitive | lineage4.1 | None | ERR4814739 | MDR-TB | lineage2.2 | None | ERR216980 | Sensitive | lineage4.3.4.2.1 | mw | SRR7517760 | Sensitive | lineage4.6.2.2 | ci | SRR3732705 | Sensitive | lineage4.3.2 | None | ERR2184344 | Sensitive | lineage4 | None | SRR4033525 | Sensitive | lineage4.3.2.1 | None | ERR4817265 | Sensitive | lineage4.2.1 | None | ERR2510820 | Other | lineage4.8 | None | ERR2510547 | Pre-XDR-TB | lineage3 | None | ERR11049245 | Sensitive | lineage5.1.1 | None | ERR11049253 | Sensitive | lineage4.8 | None | ERR234158 | Sensitive | lineage3.1 | None | SRR7439414 | Sensitive | lineage4.1.1.2 | ca | ERR11049699 | Sensitive | lineage4.8 | None | SRR5152973 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4819193 | Other | lineage4.2.1 | None | ERR4819112 | Sensitive | lineage1.1.2 | None | SRR5152950 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR5153594 | MDR-TB | lineage4.3.3 | None | ERR553065 | Sensitive | lineage3.1 | de | ERR1193770 | Sensitive | lineage4.3.4.1 | pt | SRR5153909 | Sensitive | lineage4.1 | None | SRR2024961 | Pre-XDR-TB | lineage2.2.1 | cn | SRR7439416 | Sensitive | lineage4.1.1.2 | ca | SAMN02360592 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN03648080 | HR-TB | lineage1.1.2 | None | SRR7439412 | Sensitive | lineage4.1.1.2 | ca | SRR7439413 | Sensitive | lineage4.1.1.2 | ca | SRR2024955 | Pre-XDR-TB | lineage2.2.1 | cn | SRR7439417 | Sensitive | lineage4.1.1.2 | ca | ERR550938 | Sensitive | lineage4.8 | de | SRR23340074 | MDR-TB | lineage4.3.3 | None | ERR551163 | Sensitive | lineage4.4.2 | de | SRR5486881 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11049337 | Sensitive | lineage4.8 | None | ERR2653014 | Other | lineage4.4.1.2 | None | SRR5535775 | Sensitive | lineage4.6.2.2 | None | ERR278520 | HR-TB | lineage1.1.2 | None | ERR4827985 | MDR-TB | lineage4.8 | None | ERR4821328 | Sensitive | lineage4.2.1 | None | ERR11049734 | Sensitive | lineage4.1.2.1 | None | ERR4821419 | Sensitive | lineage2.2.1 | None | ERR4827424 | HR-TB | lineage4.1 | None | ERR4821465 | Other | lineage3 | None | ERR4827429 | MDR-TB | lineage4.8 | None | SRR5818675 | Sensitive | lineage1.1.2 | None | ERR4827949 | MDR-TB | lineage4.8 | None | ERR4822215 | Sensitive | lineage3 | None | ERR4827820 | Sensitive | lineage4.5 | None | ERR4827565 | HR-TB | lineage4.8 | None | ERR3148063 | MDR-TB | lineage5.1.1 | None | ERR4828117 | MDR-TB | lineage4.8 | None | ERR4828128 | MDR-TB | lineage4.8 | None | ERR4829192 | Other | lineage4.4.1.1 | None | SRR6650199 | Sensitive | lineage1.1.3.1 | None | ERR11067331 | Sensitive | lineage4.8 | None | SRR6650249 | Sensitive | lineage1.1.3.1 | None | SRR6480609 | Sensitive | lineage4.1.1.3 | None | SRR6650169 | Sensitive | lineage1.1.3.1 | None | ERR4830065 | MDR-TB | lineage4.8 | None | ERR4829493 | Sensitive | lineage5.1.1 | None | ERR2517299 | Sensitive | lineage4.4.2 | nl | SRR6356942 | MDR-TB | lineage4.3.3 | None | SRR6650358 | Sensitive | lineage1.1.3.1 | None | ERR3078000 | MDR-TB | lineage4.2.2.2 | None | SRR6831988 | Sensitive | lineage4.1 | None | ERR4872251 | MDR-TB | lineage5.1.1 | None | ERR4831485 | Pre-XDR-TB | lineage3 | None | ERR294254 | Sensitive | lineage4.8 | None | ERR4872250 | MDR-TB | lineage5.1.1 | None | SRR6831812 | RR-TB | lineage4.3.3 | None | SRR6831971 | Sensitive | lineage4.2.1 | None | SRR6797868 | Sensitive | lineage1.2.2.2 | None | SRR6832030 | Sensitive | lineage4.3.4.2 | None | SRR6797325 | Sensitive | lineage1.1.3.1 | None | SRR6797524 | Sensitive | lineage1.1.3.1 | None | SRR6785174 | Sensitive | lineage4.3.4.2 | None | SRR6785294 | Sensitive | lineage4.3.3 | None | SRR6930934 | Pre-XDR-TB | lineage4.1 | None | SRR6797624 | Other | lineage1.1.3.1 | None | SRR6797673 | Sensitive | lineage1.1.3.1 | None | SRR6832751 | Sensitive | lineage4.2.1 | None | SRR6824423 | Sensitive | lineage4.4.2 | None | SRR7131092 | Sensitive | lineage4.4.1.1 | None | ERR4815804 | Sensitive | lineage4.2.1 | gb | SRR7131048 | Other | lineage4.4.1.1 | None | ERR4815203 | HR-TB | lineage3 | gb | SRR7131096 | Other | lineage4.8 | None | SRR7645894 | Sensitive | lineage4.3.4.1;lineage4.1.2.1 | None | SRR7131108 | Other | lineage4.4.1.1 | None | SRR924719 | Sensitive | lineage4.2.1 | None | SRR7131203 | Other | lineage4.4.1.1 | None | SRR7645876 | HR-TB | lineage4.1 | None | SRR958504 | Sensitive | lineage4.2.1 | None | SRR7646039 | HR-TB | lineage4.1 | None | SRR7646034 | RR-TB | lineage4.1 | None | SRR7645984 | Sensitive | lineage4.8 | None | ERR11466335 | Sensitive | lineage4.4.1.1 | None | ERR11067541 | HR-TB | lineage4.3.3 | None | SRR7755640 | Sensitive | lineage4.1 | None | ERR4818608 | Sensitive | lineage4.2.1 | gb | ERR10395962 | Sensitive | lineage4.8 | None | ERR11043615 | XDR-TB | lineage4.3.3 | None | ERR10969102 | Sensitive | lineage4.8 | None | ERR11043067 | Sensitive | lineage4.3.4.2 | None | ERR11043635 | Sensitive | lineage4.2.1 | None | ERR10465781 | Sensitive | lineage4.5 | None | ERR11043289 | Sensitive | lineage5.1.1 | None | ERR11043374 | MDR-TB | lineage4.3.3 | None | ERR114512 | HR-TB | lineage3 | None | ERR11043913 | Sensitive | lineage4.1 | None | ERR11044852 | Sensitive | lineage4.2.1 | None | ERR11044883 | Sensitive | lineage4.2.1 | None | ERR11043707 | Sensitive | lineage4.2.1 | None | ERR11043849 | Sensitive | lineage4.8 | None | ERR11044721 | Sensitive | lineage4.1.1.2 | None | ERR11044739 | Sensitive | lineage4.3.3 | None | ERR11044945 | Sensitive | lineage4.1 | None | ERR11044946 | Sensitive | lineage4.1 | None | ERR117646 | HR-TB | lineage1.1.2 | None | ERR351858 | Sensitive | lineage3 | None | ERR117631 | Sensitive | lineage4.8 | None | ERR3273130 | Pre-XDR-TB | lineage4.4.2 | None | ERR3323723 | Sensitive | lineage4.2.2.2 | None | ERR3470608 | Sensitive | lineage1.1.3.1 | None | ERR11049389 | Sensitive | lineage5.1.1 | None | ERR4162008 | Sensitive | lineage5.1.1 | None | ERR386790 | Sensitive | lineage3 | None | ERR4162009 | Sensitive | lineage5.1.1 | None | ERR4162012 | Sensitive | lineage5.1.1 | None | ERR4162006 | Sensitive | lineage5.1.1 | None | ERR4162013 | Sensitive | lineage5.1.1 | None | ERR4162010 | Sensitive | lineage5.1.1 | None | ERR4162014 | Sensitive | lineage5.1.1 | None | ERR4162030 | Sensitive | lineage5.1.1 | None | ERR4162029 | Sensitive | lineage5.1.1 | None | ERR4162018 | HR-TB | lineage5.1.1 | None | ERR4162027 | Sensitive | lineage5.1.1 | None | ERR4192369 | Sensitive | lineage5.1.1 | None | ERR4162023 | Sensitive | lineage5.1.1 | None | ERR4192373 | Sensitive | lineage5.1.1 | None | ERR4195496 | Sensitive | lineage4.2.1 | None | ERR4192370 | Sensitive | lineage5.1.1 | None | ERR4596929 | MDR-TB | lineage4.2.2.2;lineage3 | None | ERR4596936 | MDR-TB | lineage4.2.2.2 | None | ERR11049477 | Sensitive | lineage4.2.2.2 | None | ERR4596908 | MDR-TB | lineage4.2.2.2 | None | ERR4812688 | Sensitive | lineage4.3.2 | None | ERR4769540 | Other | La1.3 | None | ERR4800100 | Sensitive | lineage3 | None | ERR4812264 | Sensitive | lineage4.4.2 | None | ERR4769468 | Other | La1.3 | None | ERR4769535 | Other | La1.3 | None | ERR4797841 | HR-TB | lineage2.2.1 | None | ERR11049566 | Sensitive | lineage4.8 | None | ERR4800706 | HR-TB | lineage2.2.1 | None | ERR5866092 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866091 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866467 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR5987355 | MDR-TB | lineage2.2.1 | None | ERR9119253 | Sensitive | lineage4.3.3 | None | SRR16915726 | Sensitive | lineage4.3.3 | None | ERR6397177 | Sensitive | lineage3 | None | ERR6866461 | Sensitive | lineage4.3.2 | None | ERR6866591 | Sensitive | lineage4.4.2 | None | ERR11049939 | HR-TB | lineage4.8 | None | ERR7764397 | Sensitive | lineage4.7 | None | ERR9117742 | Other | lineage4.6.2 | None | ERR11050102 | HR-TB | lineage1.2.1.2 | None | ERR9119642 | MDR-TB | lineage5.1.1 | None | ERR9119870 | MDR-TB | lineage2.2.1 | None | ERR9121461 | Sensitive | lineage4.2.1 | None | ERR11050060 | Sensitive | lineage4.8 | None | ERR9119643 | MDR-TB | lineage5.1.1 | None | ERR9125153 | Sensitive | lineage1.2.1.2.1 | None | ERR987762 | Sensitive | lineage4.6.1.2 | None | SRR057725 | Sensitive | lineage4.1.1.2 | None | SRR057510 | Sensitive | lineage4.1.1.2 | None | SRR058377 | Sensitive | lineage4.1.1.2 | None | SRR057731 | Sensitive | lineage4.1.1.2 | None | SRR1013623 | Pre-XDR-TB | lineage2.2.2 | None | SRR058375 | Sensitive | lineage4.1.1.2 | None | SRR058418 | Sensitive | lineage4.1.1.2 | None | SRR1013624 | Pre-XDR-TB | lineage2.2.2 | None | ERR11050235 | Sensitive | lineage4.1 | None | SRR10305621 | RR-TB | lineage2.2.1 | None | SRR10808395 | Sensitive | lineage2.2.2 | None | SRR10525360 | MDR-TB | lineage4.1.2.1 | None | SRR1049010 | Pre-XDR-TB | lineage2.2.2 | None | SRR10525374 | Pre-XDR-TB | lineage4.8 | None | SRR10808681 | Sensitive | lineage4 | None | SRR10809189 | Sensitive | lineage4.3 | None | SRR10809001 | Sensitive | lineage1.2.1 | None | SRR11972366 | Sensitive | lineage2.2.1 | None | ERR11050381 | Other | lineage4.1 | None | SRR1169095 | Sensitive | lineage4.2.1 | None | SRR12931699 | HR-TB | lineage4.1.2.1 | None | SRR12416832 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR12931684 | HR-TB | lineage4.1.2.1 | None | SRR13423545 | HR-TB | lineage2.2.1 | None | SRR13232756 | Pre-XDR-TB | lineage4.3.3 | None | SRR12931736 | HR-TB | lineage4.1.2.1 | None | SRR13870383 | Pre-XDR-TB | lineage4.1.1 | None | SRR13583366 | MDR-TB | lineage4.3.4.2 | None | SRR13870393 | Pre-XDR-TB | lineage4.1.1 | None | SRR14296402 | Other | La1.8.1 | None | SRR14519703 | Sensitive | lineage1.2.2.2 | None | SRR14519797 | HR-TB | lineage1.2.1.2 | None | SRR14519788 | HR-TB | lineage1.2.1.2 | None | SRR14519942 | Other | lineage1.2.1.2 | None | ERR11050561 | Sensitive | lineage4.8 | None | SRR14519933 | Sensitive | lineage1.2.1.2 | None | SRR14520002 | HR-TB | lineage1.2.1.2.1 | None | SRR14520100 | Sensitive | lineage4.8 | None | SRR14636678 | Sensitive | lineage4.4.2 | None | SRR14520102 | Other | lineage4.8 | None | SRR14781937 | HR-TB | lineage4.1 | None | ERR11050576 | Sensitive | lineage1.2.2.2 | None | SRR14782416 | HR-TB | lineage2.2.1 | None | SRR14781930 | Sensitive | lineage4.1 | None | SRR14782470 | Sensitive | lineage4.8 | None | SRR14801370 | Sensitive | lineage4.1 | None | SRR14801369 | Sensitive | lineage4.1 | None | SRR15315734 | HR-TB | lineage4.5 | None | SRR14801562 | Sensitive | lineage4.1 | None | SRR14801642 | Sensitive | lineage4.1 | None | SRR1510069 | Sensitive | lineage1.2.1.2.1 | None | SRR14801646 | Sensitive | lineage2.2.1 | None | SRR15315920 | Sensitive | lineage4.5 | None | SRR15316144 | Sensitive | lineage2.2.1 | None | SRR15316399 | MDR-TB | lineage2.2.1 | None | SRR15368906 | Sensitive | lineage4.5 | None | SRR15399233 | Sensitive | lineage4.4.1.2 | None | SRR16370681 | MDR-TB | lineage1.1.1.1 | None | SRR15723240 | Sensitive | lineage4.5 | None | SRR16088514 | Sensitive | lineage4.1 | None | SRR16370494 | MDR-TB | lineage4.1.1 | None | SRR18149507 | Sensitive | lineage3.1.2.1 | None | SRR16588747 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213791 | HR-TB | lineage1.1.2 | None | ERR11050759 | Sensitive | lineage5.1.1 | None | SRR18213944 | Sensitive | lineage3 | None | SRR18715097 | Pre-XDR-TB | lineage4.3.3 | None | SRR18715090 | RR-TB | lineage4.1 | None | SRR18548990 | Sensitive | lineage2.2 | None | SRR18665468 | Sensitive | lineage4.1.1 | None | SRR19115701 | Sensitive | lineage4.2.1 | None | SRR19304069 | RR-TB | lineage4.8 | None | SRR19304018 | Sensitive | lineage4.2.1 | None | SRR19612255 | Sensitive | lineage2.2.1 | None | ERR11050795 | Sensitive | lineage4.8 | None | SRR20969572 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969553 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632774 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969562 | HR-TB | lineage2.2.1 | None | SRR20969664 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969777 | MDR-TB | lineage4.2.2 | None | SRR20969804 | Sensitive | lineage2.2.1 | None | SRR20969793 | Sensitive | lineage4.4.2 | None | SRR21277060 | Sensitive | lineage4.5 | None | SRR2100907 | HR-TB | lineage1.1.2 | None | SRR2100359 | HR-TB | lineage3 | None | SRR21277095 | Sensitive | lineage4.4.2 | None | SRR21277527 | MDR-TB | lineage2.2.1 | None | SRR21277244 | Sensitive | lineage2.2.1 | None | SRR21277450 | Other | lineage2.2.1 | None | ERR11050869 | Other | lineage4.5 | None | SRR21277626 | Sensitive | lineage2.2.1.1 | None | SRR21279382 | Sensitive | lineage4.4.2 | None | SRR21277786 | Sensitive | lineage4.4.2 | None | SRR21279443 | Sensitive | lineage4.4.2 | None | SRR22048412 | Sensitive | lineage4.8 | None | SRR21677863 | Sensitive | lineage4.8 | None | SRR22048420 | Sensitive | lineage4.1 | None | SRR21279463 | Sensitive | lineage4.2 | None | SRR22048525 | Sensitive | lineage4.2.1 | None |
|---|
