lineage | Count |
---|---|
lineage4.1.2.1 | 7 |
lineage4.3.3;lineage4.1.2.1 | 1 |
lineage3 | 8 |
lineage1.1.1 | 3 |
lineage4.4.1.1 | 2 |
lineage6 | 2 |
lineage4.6.2.2 | 3 |
lineage1.1.2 | 2 |
lineage2.2.1 | 16 |
lineage4.3.3 | 12 |
lineage4.8 | 84 |
lineage2.2.1.1 | 2 |
lineage1.1.3 | 1 |
lineage1.2.1.2.1 | 1 |
La1.7 | 1 |
lineage4 | 12 |
lineage4.2.2 | 1 |
lineage3.1.1 | 1 |
lineage4.9 | 1 |
lineage1.1.3.1 | 1 |
lineage4.1.2 | 3 |
lineage4.3.4.2 | 1 |
lineage4.5 | 2 |
lineage1.1.3.2 | 1 |
lineage4.3.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage2 | 1 |
lineage6.1.1 | 1 |
La1.8.2 | 1 |
spoligotype | Count |
---|---|
None | 173 |
ID | Drug resistance | Lineage | Country iso2 | ERR9786234 | Sensitive | lineage4.1.2.1 | None | ERR7975670 | MDR-TB | lineage4.3.3;lineage4.1.2.1 | None | ERR9117833 | Sensitive | lineage3 | None | ERR9786018 | Sensitive | lineage1.1.1 | None | ERR9285885 | Sensitive | lineage4.4.1.1 | None | ERR9787321 | Other | lineage6 | None | ERR9786579 | Sensitive | lineage4.6.2.2 | None | ERR983235 | MDR-TB | lineage1.1.2 | None | SRR1002690 | MDR-TB | lineage2.2.1 | None | SRR1002693 | MDR-TB | lineage4.3.3 | None | SRR11972159 | MDR-TB | lineage2.2.1 | None | SRR1002698 | Sensitive | lineage4.8 | None | SRR11972165 | MDR-TB | lineage2.2.1.1 | None | SRR11972170 | HR-TB | lineage3 | None | SRR11972350 | MDR-TB | lineage2.2.1 | None | SRR11972351 | MDR-TB | lineage2.2.1 | None | SRR11972362 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972392 | MDR-TB | lineage2.2.1 | None | SRR11972435 | Sensitive | lineage1.1.1 | None | SRR11972414 | MDR-TB | lineage1.1.2 | None | ERR2229537 | Sensitive | lineage4.8 | dk | SRR11972439 | MDR-TB | lineage1.1.3 | None | SRR12199388 | Other | lineage1.2.1.2.1 | None | SRR12830417 | Sensitive | lineage4.3.3 | None | SRR13986561 | Other | La1.7 | None | ERR2229577 | Sensitive | lineage4.8 | None | SRR3675250 | HR-TB | lineage3 | None | ERR2229551 | Sensitive | lineage4.8 | None | ERR2229050 | HR-TB | lineage4.8 | None | ERR2229557 | HR-TB | lineage4.8 | None | ERR1950038 | Sensitive | lineage4.8 | dk | ERR2229555 | HR-TB | lineage4.8 | None | SRR3675533 | Sensitive | lineage3 | None | ERR2229052 | Sensitive | lineage4.8 | None | ERR2229063 | Sensitive | lineage4.8 | dk | ERR2229073 | Sensitive | lineage4.8 | dk | ERR2229561 | Sensitive | lineage4.8 | None | ERR2229572 | Sensitive | lineage4.8 | None | SRR3675538 | Other | lineage4.8 | None | ERR2229078 | Sensitive | lineage4.8 | None | ERR2229076 | Other | lineage4 | None | ERR2229071 | Other | lineage4.8 | None | ERR4816119 | Other | lineage4.8 | None | ERR2229093 | HR-TB | lineage4.8 | None | ERR2229575 | Sensitive | lineage4.8 | None | ERR2229568 | Sensitive | lineage4.8 | dk | ERR2229103 | Sensitive | lineage4.8 | None | ERR2229122 | Sensitive | lineage4.8 | None | ERR2229106 | Sensitive | lineage4.8 | dk | ERR4816204 | Sensitive | lineage4.2.2 | None | ERR2229107 | Sensitive | lineage4 | None | ERR2229578 | Sensitive | lineage4 | None | ERR2229110 | Sensitive | lineage4.8 | None | ERR2229099 | Sensitive | lineage4.8 | dk | ERR2229584 | Other | lineage4.8 | None | ERR2229126 | Sensitive | lineage4.8 | dk | ERR2229101 | Sensitive | lineage4.8 | dk | ERR2229135 | Sensitive | lineage4.8 | None | ERR2229744 | Sensitive | lineage4.8 | None | ERR2229148 | Other | lineage4.8 | dk | ERR2229147 | Other | lineage4.8 | None | ERR2229155 | HR-TB | lineage4.8 | None | ERR2229171 | Sensitive | lineage4 | None | ERR2229597 | HR-TB | lineage4 | None | ERR2229162 | Sensitive | lineage4.8 | None | ERR2229172 | Sensitive | lineage4 | None | ERR2229186 | Sensitive | lineage4.8 | None | ERR2229620 | Sensitive | lineage4.8 | None | ERR2229178 | Sensitive | lineage4.8 | None | ERR2229201 | Sensitive | lineage4.8 | dk | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2229202 | Sensitive | lineage4.8 | dk | ERR2229764 | HR-TB | lineage4.8 | None | ERR2229260 | Sensitive | lineage4.8 | dk | ERR2229239 | Sensitive | lineage4.8 | None | ERR2229638 | Sensitive | lineage4.8 | None | ERR2229652 | Sensitive | lineage4.8 | None | ERR2229811 | Other | lineage4.8 | dk | ERR2229289 | Sensitive | lineage4.8 | None | ERR2229294 | Other | lineage4.8 | None | ERR2229399 | Sensitive | lineage4.8 | None | ERR2229659 | Sensitive | lineage4.8 | None | ERR2229389 | RR-TB | lineage4 | None | ERR2229380 | Sensitive | lineage4.8 | None | ERR2229415 | Sensitive | lineage4.8 | None | ERR2229418 | Sensitive | lineage4.8 | None | ERR2229406 | Other | lineage4.8 | None | ERR2229438 | Sensitive | lineage4.8 | None | ERR2229427 | Sensitive | lineage4 | None | ERR2229429 | HR-TB | lineage4.8 | None | ERR2229701 | Sensitive | lineage4.8 | None | ERR2229439 | Other | lineage4.8 | None | ERR2229443 | Other | lineage4.8 | None | ERR2229434 | Sensitive | lineage4.8 | dk | ERR2229452 | Sensitive | lineage4.8 | None | ERR2229714 | Sensitive | lineage4 | None | ERR2245277 | HR-TB | lineage3.1.1 | no | ERR2229513 | RR-TB | lineage4.8 | None | ERR2229476 | Sensitive | lineage4.8 | None | ERR2229489 | HR-TB | lineage4.8 | None | ERR2229502 | Sensitive | lineage4.9 | None | ERR2229729 | Sensitive | lineage4 | None | ERR2229481 | Other | lineage4.8 | None | ERR2229471 | Sensitive | lineage4.8 | dk | ERR2229491 | HR-TB | lineage4.8 | None | ERR2229499 | Sensitive | lineage4 | None | ERR2229496 | Sensitive | lineage4 | None | ERR2229508 | HR-TB | lineage4.8 | None | ERR2229519 | Sensitive | lineage4.8 | None | ERR2229512 | Sensitive | lineage4.8 | None | ERR2229526 | Sensitive | lineage4.8 | None | ERR4817941 | Other | lineage4.8 | gb | ERR2229523 | Sensitive | lineage4.8 | None | ERR2510682 | Pre-XDR-TB | lineage2.2.1 | it | ERR4818025 | Sensitive | lineage1.1.3.1 | gb | ERR2513084 | Sensitive | lineage4.1.2.1 | gb | ERR2513431 | Sensitive | lineage4.8 | gb | ERR2503534 | Sensitive | lineage4.1.2 | fi | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR2513306 | Sensitive | lineage4.1.2.1 | None | ERR2513328 | Sensitive | lineage4.6.2.2 | gb | ERR4818974 | Sensitive | lineage4.8 | gb | ERR2513912 | Other | lineage4.5 | gb | ERR2513728 | Other | lineage3 | gb | ERR4819347 | Other | lineage4.1.2.1 | None | ERR4819624 | Sensitive | lineage4.1.2.1 | None | ERR2514788 | Sensitive | lineage4.8 | gb | ERR4819871 | Sensitive | lineage4.8 | None | ERR4827458 | HR-TB | lineage4.3.3 | None | SRR6045432 | Other | lineage3 | gb | SRR5535697 | HR-TB | lineage4.1.2 | None | ERR4821401 | Sensitive | lineage4.8 | None | ERR4821492 | HR-TB | lineage3 | None | SRR6484871 | Sensitive | lineage4.3.3 | None | SRR6485047 | Sensitive | lineage4.8 | None | SRR6485146 | MDR-TB | lineage4.8 | None | SRR6485150 | MDR-TB | lineage2.2.1 | None | SRR6046149 | Sensitive | lineage4.6.2.2 | gb | SRR6045387 | Sensitive | lineage3 | gb | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6485042 | Sensitive | lineage4.8 | None | SRR6485094 | MDR-TB | lineage2.2.1 | None | SRR6485144 | HR-TB | lineage4.3.3 | None | SRR6257042 | MDR-TB | lineage4.3.3 | None | SRR6257062 | Sensitive | lineage4.8 | None | SRR6257044 | MDR-TB | lineage2.2.1 | None | SRR6257066 | MDR-TB | lineage4.3.3 | None | SRR6785188 | Other | lineage4.1.2 | None | SRR6896175 | Sensitive | lineage1.1.3.2 | None | ERR4972584 | MDR-TB | lineage4.3.2 | None | SRR6785240 | Sensitive | lineage4.3.3 | None | SRR6785206 | Sensitive | lineage2.2.1 | None | SRR6785235 | Sensitive | lineage4.3.3 | None | SRR6785239 | HR-TB | lineage2.2.1 | None | SRR6785243 | HR-TB | lineage4.3.3 | None | SRR6785354 | MDR-TB | lineage4.3.4.2.1 | None | SRR6785324 | MDR-TB | lineage2 | None | SRR6785367 | HR-TB | lineage2.2.1 | None | SRR6785366 | Sensitive | lineage4.1.2.1 | None | SRR6785440 | Sensitive | lineage4.1.2.1 | None | SRR6785439 | Sensitive | lineage4.5 | None | SRR6785463 | Sensitive | lineage4.3.3 | None | SRR6785420 | Sensitive | lineage4.3.3 | None | ERR1194812 | Other | lineage2.2.1 | None | SRR6785525 | HR-TB | lineage4.8 | None | ERR4192390 | Other | lineage6 | None | ERR3804037 | Sensitive | lineage1.1.1 | None | ERR5866374 | MDR-TB | lineage2.2.1 | None | ERR4192559 | Sensitive | lineage6.1.1 | None | ERR4195506 | HR-TB | lineage4.8 | None | ERR4796897 | Pre-XDR-TB | lineage2.2.1 | in | ERR5864611 | MDR-TB | lineage2.2.1 | None | ERR6140806 | Other | La1.8.2 | None |
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